RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 TTC21AQ8NDW8 1320 aa10.29□□□□□ -0.76
GINS3-205ENST00000564814 AHDC1Q5TGY3 1603 aaPredicted RBP10.29□□□□□ -0.76
GINS3-205ENST00000564814 NSD3Q9BZ95 1437 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 DIEXFQ68CQ4 756 aaKnown RBP10.28□□□□□ -0.76
GINS3-205ENST00000564814 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 CARD14Q9BXL6 1004 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 ACEP12821 1306 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 CGNL1Q0VF96 1302 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 ALS2Q96Q42 1657 aa10.28□□□□□ -0.76
GINS3-205ENST00000564814 USP31Q70CQ4 1352 aa10.27□□□□□ -0.76
GINS3-205ENST00000564814 PARD3Q8TEW0 1356 aa10.27□□□□□ -0.76
GINS3-205ENST00000564814 PXDNQ92626 1479 aa10.27□□□□□ -0.77
GINS3-205ENST00000564814 SBNO1A3KN83 1393 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 OVOS2A0A0J9YW53 1432 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 OVOS2Q6IE36 1432 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 TMC1Q8TDI8 760 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 SLAIN2Q9P270 581 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 KNSTRNQ9Y448 316 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 NPHP3Q7Z494 1330 aa10.26□□□□□ -0.77
GINS3-205ENST00000564814 PIK3C2AO00443 1686 aa10.25□□□□□ -0.77
GINS3-205ENST00000564814 MARF1Q9Y4F3 1742 aaKnown RBP10.25□□□□□ -0.77
GINS3-205ENST00000564814 BRINP3Q76B58 766 aa10.25□□□□□ -0.77
GINS3-205ENST00000564814 PHLPP1O60346 1717 aa10.24□□□□□ -0.77
GINS3-205ENST00000564814 RALBP1Q15311 655 aa10.24□□□□□ -0.77
GINS3-205ENST00000564814 ESCO1Q5FWF5 840 aa10.24□□□□□ -0.77
GINS3-205ENST00000564814 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
GINS3-205ENST00000564814 SOS2Q07890 1332 aaPredicted RBP10.24□□□□□ -0.77
GINS3-205ENST00000564814 TTC21BQ7Z4L5 1316 aa10.24□□□□□ -0.77
GINS3-205ENST00000564814 AATKQ6ZMQ8 1374 aa10.24□□□□□ -0.77
GINS3-205ENST00000564814 PHRF1Q9P1Y6 1649 aaKnown RBP10.23□□□□□ -0.77
GINS3-205ENST00000564814 FYB1O15117 783 aa10.23□□□□□ -0.77
GINS3-205ENST00000564814 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.77
GINS3-205ENST00000564814 ORAI2Q96SN7 254 aa10.23□□□□□ -0.77
GINS3-205ENST00000564814 POLR3GLQ9BT43 218 aa10.23□□□□□ -0.77
GINS3-205ENST00000564814 CRYBG1Q9Y4K1 1723 aa10.23□□□□□ -0.77
GINS3-205ENST00000564814 SMG6Q86US8 1419 aaKnown RBP10.23□□□□□ -0.77
GINS3-205ENST00000564814 SLIT3O75094 1523 aa10.23□□□□□ -0.77
GINS3-205ENST00000564814 NGDNQ8NEJ9 315 aaKnown RBP10.22□□□□□ -0.77
GINS3-205ENST00000564814 NUTM2FA1L443 756 aa10.21□□□□□ -0.77
GINS3-205ENST00000564814 ANP32CO43423 234 aa10.21□□□□□ -0.77
GINS3-205ENST00000564814 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
GINS3-205ENST00000564814 ARHGEF10O15013 1369 aa10.21□□□□□ -0.78
GINS3-205ENST00000564814 KIF24Q5T7B8 1368 aa10.21□□□□□ -0.78
GINS3-205ENST00000564814 TNS3Q68CZ2 1445 aa10.21□□□□□ -0.78
GINS3-205ENST00000564814 ABCC6O95255 1503 aa10.21□□□□□ -0.78
GINS3-205ENST00000564814 COL22A1Q8NFW1 1626 aaPredicted RBP10.21□□□□□ -0.78
GINS3-205ENST00000564814 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
GINS3-205ENST00000564814 FOXO3O43524 673 aa10.2□□□□□ -0.78
GINS3-205ENST00000564814 USP19O94966 1318 aa10.2□□□□□ -0.78
GINS3-205ENST00000564814 INSRP06213 1382 aa10.2□□□□□ -0.78
GINS3-205ENST00000564814 PSME1Q06323 249 aa10.2□□□□□ -0.78
GINS3-205ENST00000564814 COL16A1Q07092 1604 aaPredicted RBP10.2□□□□□ -0.78
GINS3-205ENST00000564814 SPATA31A3Q5VYP0 1347 aa10.19□□□□□ -0.78
GINS3-205ENST00000564814 MYBBP1AQ9BQG0 1328 aaKnown RBP10.19□□□□□ -0.78
GINS3-205ENST00000564814 NFAT5O94916 1531 aa10.18□□□□□ -0.78
GINS3-205ENST00000564814 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
GINS3-205ENST00000564814 KRT28Q7Z3Y7 464 aa10.18□□□□□ -0.78
GINS3-205ENST00000564814 JCADQ9P266 1359 aa10.17□□□□□ -0.78
GINS3-205ENST00000564814 MAP2P11137 1827 aaKnown RBP10.17□□□□□ -0.78
GINS3-205ENST00000564814 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
GINS3-205ENST00000564814 NLRP13Q86W25 1043 aa10.17□□□□□ -0.78
GINS3-205ENST00000564814 CDK12Q9NYV4 1490 aaPredicted RBP10.17□□□□□ -0.78
GINS3-205ENST00000564814 SHPRHQ149N8 1683 aa10.16□□□□□ -0.78
GINS3-205ENST00000564814 COG3Q96JB2 828 aa10.16□□□□□ -0.78
GINS3-205ENST00000564814 RTL1A6NKG5 1358 aa10.15□□□□□ -0.78
GINS3-205ENST00000564814 NME9Q86XW9 330 aa10.15□□□□□ -0.78
GINS3-205ENST00000564814 KCNH5Q8NCM2 988 aa10.15□□□□□ -0.78
GINS3-205ENST00000564814 CPDO75976 1380 aa10.14□□□□□ -0.79
GINS3-205ENST00000564814 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
GINS3-205ENST00000564814 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
GINS3-205ENST00000564814 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
GINS3-205ENST00000564814 MORC1Q86VD1 984 aa10.14□□□□□ -0.79
GINS3-205ENST00000564814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.14□□□□□ -0.79
GINS3-205ENST00000564814 ABTB2Q8N961 1025 aa10.14□□□□□ -0.79
GINS3-205ENST00000564814 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
GINS3-205ENST00000564814 GGNBP2Q9H3C7 697 aa10.14□□□□□ -0.79
GINS3-205ENST00000564814 COL3A1P02461 1466 aaPredicted RBP10.13□□□□□ -0.79
GINS3-205ENST00000564814 PPP4R3CPQ6ZMV5 832 aa10.13□□□□□ -0.79
GINS3-205ENST00000564814 MIER1Q8N108 512 aa10.13□□□□□ -0.79
GINS3-205ENST00000564814 LRP6O75581 1613 aa10.13□□□□□ -0.79
GINS3-205ENST00000564814 LTN1O94822 1766 aa10.12□□□□□ -0.79
GINS3-205ENST00000564814 COL18A1P39060 1754 aa10.12□□□□□ -0.79
GINS3-205ENST00000564814 NUTM2BA6NNL0 878 aaPredicted RBP10.12□□□□□ -0.79
GINS3-205ENST00000564814 NUTM2EB1AL46 878 aaPredicted RBP10.12□□□□□ -0.79
GINS3-205ENST00000564814 NLRP6P59044 892 aa10.12□□□□□ -0.79
GINS3-205ENST00000564814 NUTM2AQ8IVF1 878 aaPredicted RBP10.12□□□□□ -0.79
GINS3-205ENST00000564814 SPATA31A6Q5VVP1 1343 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 PEAK1Q9H792 1746 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 BLMP54132 1417 aaPredicted RBP10.11□□□□□ -0.79
GINS3-205ENST00000564814 GCP02774 474 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 POLKQ9UBT6 870 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 LMO7Q8WWI1 1683 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 FLT4P35916 1363 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 PLEKHG2Q9H7P9 1386 aa10.11□□□□□ -0.79
GINS3-205ENST00000564814 RGPD1P0DJD0 1748 aa10.1□□□□□ -0.79
GINS3-205ENST00000564814 FAM208AQ9UK61 1670 aaKnown RBP10.1□□□□□ -0.79
GINS3-205ENST00000564814 CAMTA1Q9Y6Y1 1673 aa10.1□□□□□ -0.79
GINS3-205ENST00000564814 ARHGEF25Q86VW2 580 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms