RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ACEP12821 1306 aa17.52■□□□□ 0.4
GTF3C1-204ENST00000564664 ALS2Q96Q42 1657 aa17.52■□□□□ 0.4
GTF3C1-204ENST00000564664 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
GTF3C1-204ENST00000564664 GLI3P10071 1580 aa17.52■□□□□ 0.39
GTF3C1-204ENST00000564664 ITSN1Q15811 1721 aa17.52■□□□□ 0.39
GTF3C1-204ENST00000564664 BRD4O60885 1362 aaPredicted RBP17.5■□□□□ 0.39
GTF3C1-204ENST00000564664 ABCA3Q99758 1704 aa17.5■□□□□ 0.39
GTF3C1-204ENST00000564664 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
GTF3C1-204ENST00000564664 KRT27Q7Z3Y8 459 aa17.48■□□□□ 0.39
GTF3C1-204ENST00000564664 SIN3AQ96ST3 1273 aa17.48■□□□□ 0.39
GTF3C1-204ENST00000564664 PRDM11Q9NQV5 511 aa17.48■□□□□ 0.39
GTF3C1-204ENST00000564664 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
GTF3C1-204ENST00000564664 COL14A1Q05707 1796 aaKnown RBP17.48■□□□□ 0.39
GTF3C1-204ENST00000564664 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
GTF3C1-204ENST00000564664 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
GTF3C1-204ENST00000564664 SF3B2Q13435 895 aaKnown RBP17.46■□□□□ 0.39
GTF3C1-204ENST00000564664 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
GTF3C1-204ENST00000564664 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
GTF3C1-204ENST00000564664 EP400Q96L91 3159 aa17.46■□□□□ 0.39
GTF3C1-204ENST00000564664 SPATA31A5Q5VU36 1347 aa17.46■□□□□ 0.38
GTF3C1-204ENST00000564664 SPATA31A7Q8IWB4 1347 aa17.46■□□□□ 0.38
GTF3C1-204ENST00000564664 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
GTF3C1-204ENST00000564664 CABP2Q9NPB3 220 aa17.45■□□□□ 0.38
GTF3C1-204ENST00000564664 EVC2Q86UK5 1308 aa17.45■□□□□ 0.38
GTF3C1-204ENST00000564664 FAM98CQ17RN3 349 aaKnown RBP17.44■□□□□ 0.38
GTF3C1-204ENST00000564664 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
GTF3C1-204ENST00000564664 TOPAZ1Q8N9V7 1692 aa17.43■□□□□ 0.38
GTF3C1-204ENST00000564664 PPIP5K1Q6PFW1 1433 aa17.43■□□□□ 0.38
GTF3C1-204ENST00000564664 ZC3H6P61129 1189 aaKnown RBP17.42■□□□□ 0.38
GTF3C1-204ENST00000564664 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
GTF3C1-204ENST00000564664 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
GTF3C1-204ENST00000564664 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 A0A0G2JS52 829 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 EVA1CP58658 441 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 MYT1Q01538 1121 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 BRWD3Q6RI45 1802 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 USP19O94966 1318 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
GTF3C1-204ENST00000564664 CPDO75976 1380 aa17.4■□□□□ 0.38
GTF3C1-204ENST00000564664 SPATA31A1Q5TZJ5 1347 aa17.4■□□□□ 0.38
GTF3C1-204ENST00000564664 GCP02774 474 aa17.39■□□□□ 0.37
GTF3C1-204ENST00000564664 CHRNA2Q15822 529 aa17.39■□□□□ 0.37
GTF3C1-204ENST00000564664 TRPM1Q7Z4N2 1603 aa17.37■□□□□ 0.37
GTF3C1-204ENST00000564664 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
GTF3C1-204ENST00000564664 BARGINQ6ZT62 677 aa17.37■□□□□ 0.37
GTF3C1-204ENST00000564664 STRN4Q9NRL3 753 aa17.37■□□□□ 0.37
GTF3C1-204ENST00000564664 NLRP6P59044 892 aa17.36■□□□□ 0.37
GTF3C1-204ENST00000564664 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
GTF3C1-204ENST00000564664 USP6P35125 1406 aa17.36■□□□□ 0.37
GTF3C1-204ENST00000564664 BAG6P46379 1132 aa17.35■□□□□ 0.37
GTF3C1-204ENST00000564664 PHRF1Q9P1Y6 1649 aaKnown RBP17.35■□□□□ 0.37
GTF3C1-204ENST00000564664 FAM196AQ6ZSG2 479 aa17.34■□□□□ 0.37
GTF3C1-204ENST00000564664 DEFB132Q7Z7B7 95 aa17.34■□□□□ 0.37
GTF3C1-204ENST00000564664 SSH2Q76I76 1423 aa17.33■□□□□ 0.36
GTF3C1-204ENST00000564664 TCP11L2Q8N4U5 519 aa17.33■□□□□ 0.36
GTF3C1-204ENST00000564664 SBNO2Q9Y2G9 1366 aa17.32■□□□□ 0.36
GTF3C1-204ENST00000564664 CARD11Q9BXL7 1154 aa17.32■□□□□ 0.36
GTF3C1-204ENST00000564664 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 SLC24A1O60721 1099 aa17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 LARP1Q6PKG0 1096 aaKnown RBP17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 PUS7Q96PZ0 661 aaKnown RBP17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 THSD7AQ9UPZ6 1657 aa17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
GTF3C1-204ENST00000564664 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 CAMTA1Q9Y6Y1 1673 aa17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 PDE3BQ13370 1112 aa17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
GTF3C1-204ENST00000564664 CPSF1Q10570 1443 aaKnown RBP17.28■□□□□ 0.36
GTF3C1-204ENST00000564664 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
GTF3C1-204ENST00000564664 DISP2A7MBM2 1401 aa17.27■□□□□ 0.35
GTF3C1-204ENST00000564664 SLIT3O75094 1523 aa17.26■□□□□ 0.35
GTF3C1-204ENST00000564664 SRCAPQ6ZRS2 3230 aa17.26■□□□□ 0.35
GTF3C1-204ENST00000564664 FAM182BQ5T319 152 aa17.26■□□□□ 0.35
GTF3C1-204ENST00000564664 ARHGEF25Q86VW2 580 aa17.26■□□□□ 0.35
GTF3C1-204ENST00000564664 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
GTF3C1-204ENST00000564664 COL5A2P05997 1499 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-204ENST00000564664 CRB1P82279 1406 aa17.25■□□□□ 0.35
GTF3C1-204ENST00000564664 EN1Q05925 392 aaPredicted RBP17.25■□□□□ 0.35
GTF3C1-204ENST00000564664 RGPD1P0DJD0 1748 aa17.24■□□□□ 0.35
GTF3C1-204ENST00000564664 CDCA7Q9BWT1 371 aaPredicted RBP17.24■□□□□ 0.35
GTF3C1-204ENST00000564664 TRIM37O94972 964 aa17.23■□□□□ 0.35
GTF3C1-204ENST00000564664 HDGFL2Q7Z4V5 671 aaPredicted RBP17.23■□□□□ 0.35
GTF3C1-204ENST00000564664 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
GTF3C1-204ENST00000564664 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
GTF3C1-204ENST00000564664 TOM1L2Q6ZVM7 507 aa17.22■□□□□ 0.35
GTF3C1-204ENST00000564664 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
GTF3C1-204ENST00000564664 WDR17Q8IZU2 1322 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 AKAP12Q02952 1782 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 PIK3C2AO00443 1686 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 USP31Q70CQ4 1352 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 APBA3O96018 575 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
GTF3C1-204ENST00000564664 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms