RNA–Protein interactions for RNA: ENST00000564476.1

SPNS1-206, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 3

Gene SPNS1, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-206ENST00000564476 USP6P35125 1406 aa25.69■■□□□ 1.7
SPNS1-206ENST00000564476 NSD3Q9BZ95 1437 aa25.68■■□□□ 1.7
SPNS1-206ENST00000564476 TTC21AQ8NDW8 1320 aa25.67■■□□□ 1.7
SPNS1-206ENST00000564476 AMER1Q5JTC6 1135 aaPredicted RBP25.66■■□□□ 1.7
SPNS1-206ENST00000564476 TTC21BQ7Z4L5 1316 aa25.65■■□□□ 1.7
SPNS1-206ENST00000564476 SSH2Q76I76 1423 aa25.65■■□□□ 1.7
SPNS1-206ENST00000564476 KRT28Q7Z3Y7 464 aa25.65■■□□□ 1.7
SPNS1-206ENST00000564476 NSD2O96028 1365 aa25.64■■□□□ 1.69
SPNS1-206ENST00000564476 COL16A1Q07092 1604 aaPredicted RBP25.63■■□□□ 1.69
SPNS1-206ENST00000564476 SOCS7O14512 581 aa25.63■■□□□ 1.69
SPNS1-206ENST00000564476 NRKQ7Z2Y5 1582 aa25.63■■□□□ 1.69
SPNS1-206ENST00000564476 FYB1O15117 783 aa25.61■■□□□ 1.69
SPNS1-206ENST00000564476 ANP32CO43423 234 aa25.61■■□□□ 1.69
SPNS1-206ENST00000564476 SBNO1A3KN83 1393 aa25.6■■□□□ 1.69
SPNS1-206ENST00000564476 AHDC1Q5TGY3 1603 aaPredicted RBP25.59■■□□□ 1.69
SPNS1-206ENST00000564476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.59■■□□□ 1.69
SPNS1-206ENST00000564476 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
SPNS1-206ENST00000564476 SOS2Q07890 1332 aaPredicted RBP25.59■■□□□ 1.69
SPNS1-206ENST00000564476 KIF20BQ96Q89 1820 aa25.58■■□□□ 1.69
SPNS1-206ENST00000564476 RALBP1Q15311 655 aa25.58■■□□□ 1.69
SPNS1-206ENST00000564476 PAK3O75914 559 aaPredicted RBP25.57■■□□□ 1.68
SPNS1-206ENST00000564476 TRPM3Q9HCF6 1732 aaPredicted RBP25.55■■□□□ 1.68
SPNS1-206ENST00000564476 ANKRD26Q9UPS8 1709 aa25.55■■□□□ 1.68
SPNS1-206ENST00000564476 CC2D1BQ5T0F9 858 aaKnown RBP25.55■■□□□ 1.68
SPNS1-206ENST00000564476 NHSL1Q5SYE7 1610 aa25.55■■□□□ 1.68
SPNS1-206ENST00000564476 USP31Q70CQ4 1352 aa25.55■■□□□ 1.68
SPNS1-206ENST00000564476 ABTB2Q8N961 1025 aa25.54■■□□□ 1.68
SPNS1-206ENST00000564476 COG3Q96JB2 828 aa25.54■■□□□ 1.68
SPNS1-206ENST00000564476 PRKRIP1Q9H875 184 aaPredicted RBP25.54■■□□□ 1.68
SPNS1-206ENST00000564476 PXDNQ92626 1479 aa25.53■■□□□ 1.68
SPNS1-206ENST00000564476 NME9Q86XW9 330 aa25.53■■□□□ 1.68
SPNS1-206ENST00000564476 GGNBP2Q9H3C7 697 aa25.53■■□□□ 1.68
SPNS1-206ENST00000564476 XPCQ01831 940 aaPredicted RBP25.52■■□□□ 1.68
SPNS1-206ENST00000564476 MORC1Q86VD1 984 aa25.52■■□□□ 1.68
SPNS1-206ENST00000564476 NLRP13Q86W25 1043 aa25.52■■□□□ 1.68
SPNS1-206ENST00000564476 DDX17Q92841 729 aaKnown RBP25.52■■□□□ 1.68
SPNS1-206ENST00000564476 LRRC59Q96AG4 307 aaKnown RBP25.52■■□□□ 1.68
SPNS1-206ENST00000564476 SPATA31A3Q5VYP0 1347 aa25.52■■□□□ 1.68
SPNS1-206ENST00000564476 NLRP6P59044 892 aa25.51■■□□□ 1.67
SPNS1-206ENST00000564476 JCADQ9P266 1359 aa25.51■■□□□ 1.67
SPNS1-206ENST00000564476 ARHGEF10O15013 1369 aa25.5■■□□□ 1.67
SPNS1-206ENST00000564476 PARD3Q8TEW0 1356 aa25.5■■□□□ 1.67
SPNS1-206ENST00000564476 SHPRHQ149N8 1683 aa25.49■■□□□ 1.67
SPNS1-206ENST00000564476 USP54Q70EL1 1684 aa25.49■■□□□ 1.67
SPNS1-206ENST00000564476 RGS17Q9UGC6 210 aaPredicted RBP25.48■■□□□ 1.67
SPNS1-206ENST00000564476 PIK3C2AO00443 1686 aa25.48■■□□□ 1.67
SPNS1-206ENST00000564476 TNS3Q68CZ2 1445 aa25.47■■□□□ 1.67
SPNS1-206ENST00000564476 ALS2Q96Q42 1657 aa25.47■■□□□ 1.67
SPNS1-206ENST00000564476 OVOS2A0A0J9YW53 1432 aa25.46■■□□□ 1.67
SPNS1-206ENST00000564476 OVOS2Q6IE36 1432 aa25.46■■□□□ 1.67
SPNS1-206ENST00000564476 LMOD2Q6P5Q4 547 aa25.45■■□□□ 1.66
SPNS1-206ENST00000564476 KCNH5Q8NCM2 988 aa25.44■■□□□ 1.66
SPNS1-206ENST00000564476 MARF1Q9Y4F3 1742 aaKnown RBP25.43■■□□□ 1.66
SPNS1-206ENST00000564476 MYBBP1AQ9BQG0 1328 aaKnown RBP25.43■■□□□ 1.66
SPNS1-206ENST00000564476 CNGB1Q14028 1251 aaPredicted RBP25.43■■□□□ 1.66
SPNS1-206ENST00000564476 ZRANB1Q9UGI0 708 aa25.43■■□□□ 1.66
SPNS1-206ENST00000564476 LRP6O75581 1613 aa25.43■■□□□ 1.66
SPNS1-206ENST00000564476 MIER1Q8N108 512 aa25.42■■□□□ 1.66
SPNS1-206ENST00000564476 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
SPNS1-206ENST00000564476 USP19O94966 1318 aa25.4■■□□□ 1.66
SPNS1-206ENST00000564476 PPP2R1AP30153 589 aa25.39■■□□□ 1.66
SPNS1-206ENST00000564476 NUTM2GQ5VZR2 741 aa25.39■■□□□ 1.66
SPNS1-206ENST00000564476 CCER2I3L3R5 266 aa25.38■■□□□ 1.65
SPNS1-206ENST00000564476 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
SPNS1-206ENST00000564476 MAP2P11137 1827 aaKnown RBP25.37■■□□□ 1.65
SPNS1-206ENST00000564476 GCP02774 474 aa25.36■■□□□ 1.65
SPNS1-206ENST00000564476 TNNT2P45379 298 aaPredicted RBP25.35■■□□□ 1.65
SPNS1-206ENST00000564476 POTEAQ6S8J7 498 aa25.33■■□□□ 1.65
SPNS1-206ENST00000564476 SLIT3O75094 1523 aa25.32■■□□□ 1.64
SPNS1-206ENST00000564476 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
SPNS1-206ENST00000564476 CRYBG1Q9Y4K1 1723 aa25.32■■□□□ 1.64
SPNS1-206ENST00000564476 KIF24Q5T7B8 1368 aa25.31■■□□□ 1.64
SPNS1-206ENST00000564476 PNPLA6Q8IY17 1366 aa25.31■■□□□ 1.64
SPNS1-206ENST00000564476 MTHFSP49914 203 aa25.3■■□□□ 1.64
SPNS1-206ENST00000564476 CFAP53Q96M91 514 aa25.29■■□□□ 1.64
SPNS1-206ENST00000564476 COL22A1Q8NFW1 1626 aaPredicted RBP25.28■■□□□ 1.64
SPNS1-206ENST00000564476 PHRF1Q9P1Y6 1649 aaKnown RBP25.27■■□□□ 1.64
SPNS1-206ENST00000564476 HAP1P54257 671 aaPredicted RBP25.27■■□□□ 1.64
SPNS1-206ENST00000564476 ARHGEF25Q86VW2 580 aa25.27■■□□□ 1.64
SPNS1-206ENST00000564476 INSRP06213 1382 aa25.27■■□□□ 1.64
SPNS1-206ENST00000564476 CABLES1Q8TDN4 633 aa25.26■■□□□ 1.63
SPNS1-206ENST00000564476 MAP3K19Q56UN5 1328 aa25.26■■□□□ 1.63
SPNS1-206ENST00000564476 SMG6Q86US8 1419 aaKnown RBP25.26■■□□□ 1.63
SPNS1-206ENST00000564476 NFAT5O94916 1531 aa25.26■■□□□ 1.63
SPNS1-206ENST00000564476 SOX12O15370 315 aa25.25■■□□□ 1.63
SPNS1-206ENST00000564476 RRS1Q15050 365 aaKnown RBP25.25■■□□□ 1.63
SPNS1-206ENST00000564476 MEX3CQ5U5Q3 659 aaKnown RBP25.25■■□□□ 1.63
SPNS1-206ENST00000564476 CPDO75976 1380 aa25.25■■□□□ 1.63
SPNS1-206ENST00000564476 FBLN1P23142 703 aa25.24■■□□□ 1.63
SPNS1-206ENST00000564476 ABCA3Q99758 1704 aa25.23■■□□□ 1.63
SPNS1-206ENST00000564476 NUTM2BA6NNL0 878 aaPredicted RBP25.23■■□□□ 1.63
SPNS1-206ENST00000564476 NUTM2EB1AL46 878 aaPredicted RBP25.23■■□□□ 1.63
SPNS1-206ENST00000564476 AMPHP49418 695 aa25.23■■□□□ 1.63
SPNS1-206ENST00000564476 NUTM2AQ8IVF1 878 aaPredicted RBP25.23■■□□□ 1.63
SPNS1-206ENST00000564476 EMILIN1Q9Y6C2 1016 aa25.23■■□□□ 1.63
SPNS1-206ENST00000564476 LTN1O94822 1766 aa25.23■■□□□ 1.63
SPNS1-206ENST00000564476 RTL1A6NKG5 1358 aa25.22■■□□□ 1.63
SPNS1-206ENST00000564476 IP6K1Q92551 441 aa25.22■■□□□ 1.63
SPNS1-206ENST00000564476 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
SPNS1-206ENST00000564476 FLT4P35916 1363 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms