RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 BCAR3O75815 825 aa21.51■■□□□ 1.03
CCNF-204ENST00000564333 CPSF1Q10570 1443 aaKnown RBP21.51■■□□□ 1.03
CCNF-204ENST00000564333 EDC4Q6P2E9 1401 aaKnown RBP21.51■■□□□ 1.03
CCNF-204ENST00000564333 ADAMTS13Q76LX8 1427 aa21.5■■□□□ 1.03
CCNF-204ENST00000564333 TXNDC2Q86VQ3 553 aa21.5■■□□□ 1.03
CCNF-204ENST00000564333 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
CCNF-204ENST00000564333 SIRT1Q96EB6 747 aa21.49■■□□□ 1.03
CCNF-204ENST00000564333 PNPLA6Q8IY17 1366 aa21.48■■□□□ 1.03
CCNF-204ENST00000564333 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
CCNF-204ENST00000564333 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
CCNF-204ENST00000564333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCNF-204ENST00000564333 KDM2BQ8NHM5 1336 aa21.47■■□□□ 1.03
CCNF-204ENST00000564333 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
CCNF-204ENST00000564333 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
CCNF-204ENST00000564333 LRRC7Q96NW7 1537 aa21.46■■□□□ 1.03
CCNF-204ENST00000564333 PLEKHF1Q96S99 279 aa21.45■■□□□ 1.02
CCNF-204ENST00000564333 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.45■■□□□ 1.02
CCNF-204ENST00000564333 MAPK8IP3Q9UPT6 1336 aa21.45■■□□□ 1.02
CCNF-204ENST00000564333 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
CCNF-204ENST00000564333 ROBO2Q9HCK4 1378 aa21.44■■□□□ 1.02
CCNF-204ENST00000564333 CENPQQ7L2Z9 268 aaPredicted RBP21.44■■□□□ 1.02
CCNF-204ENST00000564333 MS4A1P11836 297 aa21.43■■□□□ 1.02
CCNF-204ENST00000564333 IPO9Q96P70 1041 aaKnown RBP21.43■■□□□ 1.02
CCNF-204ENST00000564333 MYH16Q9H6N6 1097 aa21.43■■□□□ 1.02
CCNF-204ENST00000564333 NRKQ7Z2Y5 1582 aa21.43■■□□□ 1.02
CCNF-204ENST00000564333 SLIT1O75093 1534 aa21.43■■□□□ 1.02
CCNF-204ENST00000564333 NUDT16Q96DE0 195 aaKnown RBP21.43■■□□□ 1.02
CCNF-204ENST00000564333 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
CCNF-204ENST00000564333 CDK12Q9NYV4 1490 aaPredicted RBP21.41■■□□□ 1.02
CCNF-204ENST00000564333 ARHGAP23Q9P227 1491 aa21.41■■□□□ 1.02
CCNF-204ENST00000564333 PDE3AQ14432 1141 aa21.41■■□□□ 1.02
CCNF-204ENST00000564333 TMPOP42166 694 aaKnown RBP21.4■■□□□ 1.02
CCNF-204ENST00000564333 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
CCNF-204ENST00000564333 RARSP54136 660 aaKnown RBP21.4■■□□□ 1.02
CCNF-204ENST00000564333 LTKP29376 864 aa21.39■■□□□ 1.02
CCNF-204ENST00000564333 CCDC61Q9Y6R9 512 aa21.39■■□□□ 1.02
CCNF-204ENST00000564333 POLKQ9UBT6 870 aa21.39■■□□□ 1.01
CCNF-204ENST00000564333 NME9Q86XW9 330 aa21.38■■□□□ 1.01
CCNF-204ENST00000564333 PNNQ9H307 717 aaKnown RBP21.38■■□□□ 1.01
CCNF-204ENST00000564333 PRR36Q9H6K5 1346 aa21.38■■□□□ 1.01
CCNF-204ENST00000564333 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
CCNF-204ENST00000564333 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
CCNF-204ENST00000564333 AATKQ6ZMQ8 1374 aa21.36■■□□□ 1.01
CCNF-204ENST00000564333 TRIM35Q9UPQ4 493 aa21.36■■□□□ 1.01
CCNF-204ENST00000564333 PTPRUQ92729 1446 aa21.36■■□□□ 1.01
CCNF-204ENST00000564333 PDE4AP27815 886 aa21.35■■□□□ 1.01
CCNF-204ENST00000564333 SKAP1Q86WV1 359 aa21.35■■□□□ 1.01
CCNF-204ENST00000564333 ZBTB47Q9UFB7 747 aaPredicted RBP21.35■■□□□ 1.01
CCNF-204ENST00000564333 PPM1GO15355 546 aaPredicted RBP21.35■■□□□ 1.01
CCNF-204ENST00000564333 FRAT1Q92837 279 aaPredicted RBP21.35■■□□□ 1.01
CCNF-204ENST00000564333 EID1Q9Y6B2 187 aa21.35■■□□□ 1.01
CCNF-204ENST00000564333 FBLN1P23142 703 aa21.34■■□□□ 1.01
CCNF-204ENST00000564333 PANK1Q8TE04 598 aa21.34■■□□□ 1.01
CCNF-204ENST00000564333 IL16Q14005 1332 aa21.34■■□□□ 1.01
CCNF-204ENST00000564333 BACH2Q9BYV9 841 aa21.33■■□□□ 1.01
CCNF-204ENST00000564333 FCHSD2O94868 740 aa21.33■■□□□ 1
CCNF-204ENST00000564333 COG3Q96JB2 828 aa21.33■■□□□ 1
CCNF-204ENST00000564333 EMILIN1Q9Y6C2 1016 aa21.33■■□□□ 1
CCNF-204ENST00000564333 NALCNQ8IZF0 1738 aa21.33■■□□□ 1
CCNF-204ENST00000564333 PTCH1Q13635 1447 aa21.32■■□□□ 1
CCNF-204ENST00000564333 CT47B1P0C2W7 299 aaPredicted RBP21.32■■□□□ 1
CCNF-204ENST00000564333 TSR2Q969E8 191 aaKnown RBP21.32■■□□□ 1
CCNF-204ENST00000564333 RSPH6AQ9H0K4 717 aa21.32■■□□□ 1
CCNF-204ENST00000564333 ZRANB1Q9UGI0 708 aa21.32■■□□□ 1
CCNF-204ENST00000564333 COG6Q9Y2V7 657 aa21.32■■□□□ 1
CCNF-204ENST00000564333 RIPK4P57078 832 aa21.31■■□□□ 1
CCNF-204ENST00000564333 BCL2L13Q9BXK5 485 aa21.31■■□□□ 1
CCNF-204ENST00000564333 ZNF692Q9BU19 519 aaPredicted RBP21.31■■□□□ 1
CCNF-204ENST00000564333 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
CCNF-204ENST00000564333 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
CCNF-204ENST00000564333 PRKAR2BP31323 418 aa21.3■■□□□ 1
CCNF-204ENST00000564333 CLUAP1Q96AJ1 413 aa21.3■■□□□ 1
CCNF-204ENST00000564333 PLPPR3Q6T4P5 718 aa21.29■■□□□ 1
CCNF-204ENST00000564333 SLC26A8Q96RN1 970 aa21.29■■□□□ 1
CCNF-204ENST00000564333 NEFMP07197 916 aa21.28■■□□□ 1
CCNF-204ENST00000564333 EXOSC9Q06265 439 aaKnown RBP21.27■■□□□ 1
CCNF-204ENST00000564333 CEP170BQ9Y4F5 1589 aaPredicted RBP21.27■■□□□ 1
CCNF-204ENST00000564333 OVOS2A0A0J9YW53 1432 aa21.27■■□□□ 1
CCNF-204ENST00000564333 USP6P35125 1406 aa21.27■■□□□ 1
CCNF-204ENST00000564333 OVOS2Q6IE36 1432 aa21.27■■□□□ 1
CCNF-204ENST00000564333 DLG5Q8TDM6 1919 aa21.27■■□□□ 1
CCNF-204ENST00000564333 IL13P35225 146 aa21.27■■□□□ 1
CCNF-204ENST00000564333 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
CCNF-204ENST00000564333 RLBP1P12271 317 aa21.25■□□□□ 0.99
CCNF-204ENST00000564333 AAMPQ13685 434 aa21.25■□□□□ 0.99
CCNF-204ENST00000564333 VIRMAQ69YN4 1812 aaKnown RBP21.25■□□□□ 0.99
CCNF-204ENST00000564333 ACEP12821 1306 aa21.25■□□□□ 0.99
CCNF-204ENST00000564333 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
CCNF-204ENST00000564333 HMOX1P09601 288 aa21.25■□□□□ 0.99
CCNF-204ENST00000564333 TBX22Q9Y458 520 aa21.25■□□□□ 0.99
CCNF-204ENST00000564333 TTC21BQ7Z4L5 1316 aa21.24■□□□□ 0.99
CCNF-204ENST00000564333 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
CCNF-204ENST00000564333 RRS1Q15050 365 aaKnown RBP21.24■□□□□ 0.99
CCNF-204ENST00000564333 THEMISQ8N1K5 641 aaPredicted RBP21.24■□□□□ 0.99
CCNF-204ENST00000564333 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
CCNF-204ENST00000564333 RGPD8O14715 1765 aaPredicted RBP21.24■□□□□ 0.99
CCNF-204ENST00000564333 DEKP35659 375 aaKnown RBP21.23■□□□□ 0.99
CCNF-204ENST00000564333 NFE2L2Q16236 605 aa21.23■□□□□ 0.99
CCNF-204ENST00000564333 RTL5Q5HYW3 569 aaPredicted RBP21.23■□□□□ 0.99
CCNF-204ENST00000564333 IGHDP01880 384 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms