RNA–Protein interactions for RNA: ENST00000563629.1

CYLD-205, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-205ENST00000563629 UBR1Q8IWV7 1749 aa10.01□□□□□ -0.81
CYLD-205ENST00000563629 ROBO2Q9HCK4 1378 aa10.01□□□□□ -0.81
CYLD-205ENST00000563629 ADAMTS13Q76LX8 1427 aa10.01□□□□□ -0.81
CYLD-205ENST00000563629 FBLN1P23142 703 aa10.01□□□□□ -0.81
CYLD-205ENST00000563629 TRMT2AQ8IZ69 625 aaKnown RBP10.01□□□□□ -0.81
CYLD-205ENST00000563629 CABP1Q9NZU7 370 aa10.01□□□□□ -0.81
CYLD-205ENST00000563629 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
CYLD-205ENST00000563629 PLEKHG5O94827 1062 aa10□□□□□ -0.81
CYLD-205ENST00000563629 RUNDC1Q96C34 613 aa10□□□□□ -0.81
CYLD-205ENST00000563629 CFAP53Q96M91 514 aa10□□□□□ -0.81
CYLD-205ENST00000563629 IGHDP01880 384 aa10□□□□□ -0.81
CYLD-205ENST00000563629 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
CYLD-205ENST00000563629 PTPRUQ92729 1446 aa9.99□□□□□ -0.81
CYLD-205ENST00000563629 PPM1GO15355 546 aaPredicted RBP9.99□□□□□ -0.81
CYLD-205ENST00000563629 TSR2Q969E8 191 aaKnown RBP9.99□□□□□ -0.81
CYLD-205ENST00000563629 A0A1W2PP64 1363 aa9.99□□□□□ -0.81
CYLD-205ENST00000563629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.81
CYLD-205ENST00000563629 NEFMP07197 916 aa9.98□□□□□ -0.81
CYLD-205ENST00000563629 NRXN3Q9Y4C0 1643 aa9.97□□□□□ -0.81
CYLD-205ENST00000563629 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
CYLD-205ENST00000563629 PLEKHG1Q9ULL1 1385 aa9.97□□□□□ -0.81
CYLD-205ENST00000563629 C8orf34Q49A92 452 aa9.97□□□□□ -0.81
CYLD-205ENST00000563629 PMFBP1Q8TBY8 1022 aa9.97□□□□□ -0.81
CYLD-205ENST00000563629 CEP170BQ9Y4F5 1589 aaPredicted RBP9.97□□□□□ -0.81
CYLD-205ENST00000563629 RLBP1P12271 317 aa9.96□□□□□ -0.81
CYLD-205ENST00000563629 FAM161AQ3B820 660 aa9.96□□□□□ -0.81
CYLD-205ENST00000563629 DAXXQ9UER7 740 aaPredicted RBP9.96□□□□□ -0.82
CYLD-205ENST00000563629 IQSEC2Q5JU85 1478 aa9.96□□□□□ -0.82
CYLD-205ENST00000563629 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
CYLD-205ENST00000563629 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
CYLD-205ENST00000563629 RARSP54136 660 aaKnown RBP9.95□□□□□ -0.82
CYLD-205ENST00000563629 C14orf37Q86TY3 774 aa9.95□□□□□ -0.82
CYLD-205ENST00000563629 ZRANB1Q9UGI0 708 aa9.95□□□□□ -0.82
CYLD-205ENST00000563629 TBX22Q9Y458 520 aa9.95□□□□□ -0.82
CYLD-205ENST00000563629 PRR36Q9H6K5 1346 aa9.94□□□□□ -0.82
CYLD-205ENST00000563629 SOX12O15370 315 aa9.94□□□□□ -0.82
CYLD-205ENST00000563629 NUDT16Q96DE0 195 aaKnown RBP9.94□□□□□ -0.82
CYLD-205ENST00000563629 MAPK8IP3Q9UPT6 1336 aa9.94□□□□□ -0.82
CYLD-205ENST00000563629 ARHGAP23Q9P227 1491 aa9.94□□□□□ -0.82
CYLD-205ENST00000563629 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
CYLD-205ENST00000563629 USP32Q8NFA0 1604 aa9.93□□□□□ -0.82
CYLD-205ENST00000563629 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
CYLD-205ENST00000563629 FYB1O15117 783 aa9.92□□□□□ -0.82
CYLD-205ENST00000563629 PDE3AQ14432 1141 aa9.92□□□□□ -0.82
CYLD-205ENST00000563629 FTSJ3Q8IY81 847 aaKnown RBP9.92□□□□□ -0.82
CYLD-205ENST00000563629 SLIT1O75093 1534 aa9.92□□□□□ -0.82
CYLD-205ENST00000563629 EXOSC9Q06265 439 aaKnown RBP9.92□□□□□ -0.82
CYLD-205ENST00000563629 NUTM2GQ5VZR2 741 aa9.92□□□□□ -0.82
CYLD-205ENST00000563629 TERF2IPQ9NYB0 399 aa9.92□□□□□ -0.82
CYLD-205ENST00000563629 PCDHB15Q9Y5E8 787 aa9.92□□□□□ -0.82
CYLD-205ENST00000563629 XPCQ01831 940 aaPredicted RBP9.91□□□□□ -0.82
CYLD-205ENST00000563629 MYH16Q9H6N6 1097 aa9.91□□□□□ -0.82
CYLD-205ENST00000563629 SMC4Q9NTJ3 1288 aa9.91□□□□□ -0.82
CYLD-205ENST00000563629 SEC24BO95487 1268 aa9.91□□□□□ -0.82
CYLD-205ENST00000563629 WDR63Q8IWG1 891 aa9.91□□□□□ -0.82
CYLD-205ENST00000563629 NGEFQ8N5V2 710 aa9.91□□□□□ -0.82
CYLD-205ENST00000563629 HMOX1P09601 288 aa9.9□□□□□ -0.82
CYLD-205ENST00000563629 HDGFL2Q7Z4V5 671 aaPredicted RBP9.9□□□□□ -0.82
CYLD-205ENST00000563629 SETD1AO15047 1707 aaKnown RBP9.9□□□□□ -0.82
CYLD-205ENST00000563629 NSD2O96028 1365 aa9.9□□□□□ -0.82
CYLD-205ENST00000563629 TMPOP42166 694 aaKnown RBP9.9□□□□□ -0.82
CYLD-205ENST00000563629 RIPK4P57078 832 aa9.9□□□□□ -0.82
CYLD-205ENST00000563629 PROSER2Q86WR7 435 aaPredicted RBP9.9□□□□□ -0.82
CYLD-205ENST00000563629 NME9Q86XW9 330 aa9.9□□□□□ -0.82
CYLD-205ENST00000563629 MED14O60244 1454 aa9.9□□□□□ -0.83
CYLD-205ENST00000563629 ITPRIPQ8IWB1 547 aa9.89□□□□□ -0.83
CYLD-205ENST00000563629 CCDC61Q9Y6R9 512 aa9.89□□□□□ -0.83
CYLD-205ENST00000563629 NPHP4O75161 1426 aaPredicted RBP9.89□□□□□ -0.83
CYLD-205ENST00000563629 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
CYLD-205ENST00000563629 DIAPH1O60610 1272 aaKnown RBP9.89□□□□□ -0.83
CYLD-205ENST00000563629 DDX17Q92841 729 aaKnown RBP9.89□□□□□ -0.83
CYLD-205ENST00000563629 PHF23Q9BUL5 403 aaPredicted RBP9.89□□□□□ -0.83
CYLD-205ENST00000563629 CD163L1Q9NR16 1453 aa9.89□□□□□ -0.83
CYLD-205ENST00000563629 THUMPD2Q9BTF0 503 aaKnown RBP9.88□□□□□ -0.83
CYLD-205ENST00000563629 TRIM35Q9UPQ4 493 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 ZKSCAN2Q63HK3 967 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 ORAI2Q96SN7 254 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 NINLQ9Y2I6 1382 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 PPIP5K1Q6PFW1 1433 aa9.88□□□□□ -0.83
CYLD-205ENST00000563629 SSH1Q8WYL5 1049 aa9.87□□□□□ -0.83
CYLD-205ENST00000563629 ADGRB2O60241 1585 aa9.87□□□□□ -0.83
CYLD-205ENST00000563629 ACEP12821 1306 aa9.87□□□□□ -0.83
CYLD-205ENST00000563629 VIRMAQ69YN4 1812 aaKnown RBP9.87□□□□□ -0.83
CYLD-205ENST00000563629 PRKAR2BP31323 418 aa9.87□□□□□ -0.83
CYLD-205ENST00000563629 CCDC27Q2M243 656 aa9.87□□□□□ -0.83
CYLD-205ENST00000563629 DZIP1LQ8IYY4 767 aaKnown RBP9.87□□□□□ -0.83
CYLD-205ENST00000563629 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
CYLD-205ENST00000563629 ZNF335Q9H4Z2 1342 aaPredicted RBP9.87□□□□□ -0.83
CYLD-205ENST00000563629 KIF20BQ96Q89 1820 aa9.87□□□□□ -0.83
CYLD-205ENST00000563629 ELL2O00472 640 aaPredicted RBP9.86□□□□□ -0.83
CYLD-205ENST00000563629 TRIM27P14373 513 aa9.86□□□□□ -0.83
CYLD-205ENST00000563629 MVPQ14764 893 aaKnown RBP9.86□□□□□ -0.83
CYLD-205ENST00000563629 ESCO1Q5FWF5 840 aa9.86□□□□□ -0.83
CYLD-205ENST00000563629 EMILIN1Q9Y6C2 1016 aa9.86□□□□□ -0.83
CYLD-205ENST00000563629 COL3A1P02461 1466 aaPredicted RBP9.86□□□□□ -0.83
CYLD-205ENST00000563629 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.86□□□□□ -0.83
CYLD-205ENST00000563629 NOB1Q9ULX3 412 aaKnown RBP9.86□□□□□ -0.83
CYLD-205ENST00000563629 ANKRD26Q9UPS8 1709 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms