RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 SLC12A5Q9H2X9 1139 aa20.31■□□□□ 0.84
CDH11-207ENST00000563255 SRCAPQ6ZRS2 3230 aa20.31■□□□□ 0.84
CDH11-207ENST00000563255 ESCO1Q5FWF5 840 aa20.3■□□□□ 0.84
CDH11-207ENST00000563255 PANK3Q9H999 370 aa20.3■□□□□ 0.84
CDH11-207ENST00000563255 ANKRD36BQ8N2N9 1353 aa20.3■□□□□ 0.84
CDH11-207ENST00000563255 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
CDH11-207ENST00000563255 KIF1AQ12756 1690 aa20.29■□□□□ 0.84
CDH11-207ENST00000563255 CABP1Q9NZU7 370 aa20.29■□□□□ 0.84
CDH11-207ENST00000563255 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
CDH11-207ENST00000563255 USP21Q9UK80 565 aa20.28■□□□□ 0.84
CDH11-207ENST00000563255 NUTM2FA1L443 756 aa20.27■□□□□ 0.84
CDH11-207ENST00000563255 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
CDH11-207ENST00000563255 CPSF1Q10570 1443 aaKnown RBP20.27■□□□□ 0.83
CDH11-207ENST00000563255 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
CDH11-207ENST00000563255 FOXO3O43524 673 aa20.25■□□□□ 0.83
CDH11-207ENST00000563255 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
CDH11-207ENST00000563255 A0A1W2PP64 1363 aa20.24■□□□□ 0.83
CDH11-207ENST00000563255 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
CDH11-207ENST00000563255 HDGFL2Q7Z4V5 671 aaPredicted RBP20.24■□□□□ 0.83
CDH11-207ENST00000563255 NRKQ7Z2Y5 1582 aa20.24■□□□□ 0.83
CDH11-207ENST00000563255 NPHP3Q7Z494 1330 aa20.24■□□□□ 0.83
CDH11-207ENST00000563255 POLR3AO14802 1390 aaPredicted RBP20.23■□□□□ 0.83
CDH11-207ENST00000563255 ZNF692Q9BU19 519 aaPredicted RBP20.23■□□□□ 0.83
CDH11-207ENST00000563255 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
CDH11-207ENST00000563255 ANKRD26Q9UPS8 1709 aa20.22■□□□□ 0.83
CDH11-207ENST00000563255 FNBP4Q8N3X1 1017 aaPredicted RBP20.22■□□□□ 0.83
CDH11-207ENST00000563255 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
CDH11-207ENST00000563255 ACEP12821 1306 aa20.21■□□□□ 0.83
CDH11-207ENST00000563255 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
CDH11-207ENST00000563255 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
CDH11-207ENST00000563255 KTN1Q86UP2 1357 aaKnown RBP20.2■□□□□ 0.82
CDH11-207ENST00000563255 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
CDH11-207ENST00000563255 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
CDH11-207ENST00000563255 NPC1L1Q9UHC9 1359 aa20.18■□□□□ 0.82
CDH11-207ENST00000563255 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
CDH11-207ENST00000563255 NGDNQ8NEJ9 315 aaKnown RBP20.17■□□□□ 0.82
CDH11-207ENST00000563255 USP6P35125 1406 aa20.17■□□□□ 0.82
CDH11-207ENST00000563255 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
CDH11-207ENST00000563255 PXDNQ92626 1479 aa20.16■□□□□ 0.82
CDH11-207ENST00000563255 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CDH11-207ENST00000563255 AMER1Q5JTC6 1135 aaPredicted RBP20.15■□□□□ 0.82
CDH11-207ENST00000563255 SSH2Q76I76 1423 aa20.15■□□□□ 0.82
CDH11-207ENST00000563255 TRPM3Q9HCF6 1732 aaPredicted RBP20.15■□□□□ 0.82
CDH11-207ENST00000563255 COL22A1Q8NFW1 1626 aaPredicted RBP20.14■□□□□ 0.81
CDH11-207ENST00000563255 ANP32CO43423 234 aa20.14■□□□□ 0.81
CDH11-207ENST00000563255 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
CDH11-207ENST00000563255 ATRNO75882 1429 aa20.13■□□□□ 0.81
CDH11-207ENST00000563255 CGNL1Q0VF96 1302 aa20.13■□□□□ 0.81
CDH11-207ENST00000563255 NSD2O96028 1365 aa20.12■□□□□ 0.81
CDH11-207ENST00000563255 KRT28Q7Z3Y7 464 aa20.11■□□□□ 0.81
CDH11-207ENST00000563255 BCL9LQ86UU0 1499 aa20.11■□□□□ 0.81
CDH11-207ENST00000563255 TTC21AQ8NDW8 1320 aa20.1■□□□□ 0.81
CDH11-207ENST00000563255 GJD4Q96KN9 370 aaPredicted RBP20.1■□□□□ 0.81
CDH11-207ENST00000563255 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
CDH11-207ENST00000563255 PIK3C2AO00443 1686 aa20.1■□□□□ 0.81
CDH11-207ENST00000563255 SPATA31A3Q5VYP0 1347 aa20.09■□□□□ 0.81
CDH11-207ENST00000563255 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
CDH11-207ENST00000563255 PSME1Q06323 249 aa20.09■□□□□ 0.81
CDH11-207ENST00000563255 ZRANB1Q9UGI0 708 aa20.09■□□□□ 0.81
CDH11-207ENST00000563255 MARF1Q9Y4F3 1742 aaKnown RBP20.09■□□□□ 0.81
CDH11-207ENST00000563255 ALS2Q96Q42 1657 aa20.09■□□□□ 0.81
CDH11-207ENST00000563255 PARD3Q8TEW0 1356 aa20.08■□□□□ 0.81
CDH11-207ENST00000563255 FYB1O15117 783 aa20.08■□□□□ 0.81
CDH11-207ENST00000563255 PLEKHG5O94827 1062 aa20.08■□□□□ 0.81
CDH11-207ENST00000563255 RALBP1Q15311 655 aa20.08■□□□□ 0.81
CDH11-207ENST00000563255 HAP1P54257 671 aaPredicted RBP20.07■□□□□ 0.8
CDH11-207ENST00000563255 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
CDH11-207ENST00000563255 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
CDH11-207ENST00000563255 UNC5CLQ8IV45 518 aa20.06■□□□□ 0.8
CDH11-207ENST00000563255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDH11-207ENST00000563255 LMOD2Q6P5Q4 547 aa20.05■□□□□ 0.8
CDH11-207ENST00000563255 MIER1Q8N108 512 aa20.05■□□□□ 0.8
CDH11-207ENST00000563255 CABLES1Q8TDN4 633 aa20.04■□□□□ 0.8
CDH11-207ENST00000563255 CCDC125Q86Z20 511 aa20.03■□□□□ 0.8
CDH11-207ENST00000563255 SBNO1A3KN83 1393 aa20.03■□□□□ 0.8
CDH11-207ENST00000563255 USP31Q70CQ4 1352 aa20.03■□□□□ 0.8
CDH11-207ENST00000563255 NME9Q86XW9 330 aa20.02■□□□□ 0.8
CDH11-207ENST00000563255 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
CDH11-207ENST00000563255 MORC1Q86VD1 984 aa20.01■□□□□ 0.79
CDH11-207ENST00000563255 OVOS2A0A0J9YW53 1432 aa20.01■□□□□ 0.79
CDH11-207ENST00000563255 OVOS2Q6IE36 1432 aa20.01■□□□□ 0.79
CDH11-207ENST00000563255 CNGB1Q14028 1251 aaPredicted RBP20■□□□□ 0.79
CDH11-207ENST00000563255 MYBBP1AQ9BQG0 1328 aaKnown RBP20■□□□□ 0.79
CDH11-207ENST00000563255 SLIT2O94813 1529 aa19.99■□□□□ 0.79
CDH11-207ENST00000563255 PAK3O75914 559 aaPredicted RBP19.99■□□□□ 0.79
CDH11-207ENST00000563255 ABTB2Q8N961 1025 aa19.99■□□□□ 0.79
CDH11-207ENST00000563255 COG3Q96JB2 828 aa19.99■□□□□ 0.79
CDH11-207ENST00000563255 TNS3Q68CZ2 1445 aa19.99■□□□□ 0.79
CDH11-207ENST00000563255 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
CDH11-207ENST00000563255 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
CDH11-207ENST00000563255 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
CDH11-207ENST00000563255 CCER2I3L3R5 266 aa19.97■□□□□ 0.79
CDH11-207ENST00000563255 GLI3P10071 1580 aa19.96■□□□□ 0.79
CDH11-207ENST00000563255 DEFB132Q7Z7B7 95 aa19.96■□□□□ 0.79
CDH11-207ENST00000563255 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
CDH11-207ENST00000563255 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
CDH11-207ENST00000563255 NLRP6P59044 892 aa19.95■□□□□ 0.78
CDH11-207ENST00000563255 VPS72Q15906 364 aa19.95■□□□□ 0.78
CDH11-207ENST00000563255 NLRP13Q86W25 1043 aa19.95■□□□□ 0.78
CDH11-207ENST00000563255 LTN1O94822 1766 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms