RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
USB1-207ENST00000563149 PNPLA6Q8IY17 1366 aa16.65■□□□□ 0.26
USB1-207ENST00000563149 HDAC1Q13547 482 aaPredicted RBP16.65■□□□□ 0.26
USB1-207ENST00000563149 TBC1D32Q96NH3 1257 aa16.65■□□□□ 0.26
USB1-207ENST00000563149 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
USB1-207ENST00000563149 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
USB1-207ENST00000563149 FYB1O15117 783 aa16.64■□□□□ 0.25
USB1-207ENST00000563149 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
USB1-207ENST00000563149 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
USB1-207ENST00000563149 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
USB1-207ENST00000563149 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
USB1-207ENST00000563149 FRAT2O75474 233 aaPredicted RBP16.64■□□□□ 0.25
USB1-207ENST00000563149 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
USB1-207ENST00000563149 GGNBP2Q9H3C7 697 aa16.64■□□□□ 0.25
USB1-207ENST00000563149 SMC4Q9NTJ3 1288 aa16.64■□□□□ 0.25
USB1-207ENST00000563149 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
USB1-207ENST00000563149 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
USB1-207ENST00000563149 POGKQ9P215 609 aa16.62■□□□□ 0.25
USB1-207ENST00000563149 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
USB1-207ENST00000563149 IPO8O15397 1037 aaKnown RBP16.61■□□□□ 0.25
USB1-207ENST00000563149 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 STK26Q9P289 416 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 KIF16BQ96L93 1317 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 ALKQ9UM73 1620 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
USB1-207ENST00000563149 TSR2Q969E8 191 aaKnown RBP16.61■□□□□ 0.25
USB1-207ENST00000563149 PRAM1Q96QH2 718 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
USB1-207ENST00000563149 FCHSD2O94868 740 aa16.6■□□□□ 0.25
USB1-207ENST00000563149 TRIM27P14373 513 aa16.6■□□□□ 0.25
USB1-207ENST00000563149 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
USB1-207ENST00000563149 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
USB1-207ENST00000563149 YEATS2Q9ULM3 1422 aa16.59■□□□□ 0.25
USB1-207ENST00000563149 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
USB1-207ENST00000563149 RIPK4P57078 832 aa16.59■□□□□ 0.25
USB1-207ENST00000563149 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
USB1-207ENST00000563149 SMC5Q8IY18 1101 aa16.59■□□□□ 0.25
USB1-207ENST00000563149 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
USB1-207ENST00000563149 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
USB1-207ENST00000563149 ATP7BP35670 1465 aa16.57■□□□□ 0.24
USB1-207ENST00000563149 CDK19Q9BWU1 502 aa16.57■□□□□ 0.24
USB1-207ENST00000563149 ANTXR1Q9H6X2 564 aa16.57■□□□□ 0.24
USB1-207ENST00000563149 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
USB1-207ENST00000563149 ITPRIPQ8IWB1 547 aa16.56■□□□□ 0.24
USB1-207ENST00000563149 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
USB1-207ENST00000563149 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
USB1-207ENST00000563149 ZBTB40Q9NUA8 1239 aa16.56■□□□□ 0.24
USB1-207ENST00000563149 CALD1Q05682 793 aaKnown RBP16.55■□□□□ 0.24
USB1-207ENST00000563149 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
USB1-207ENST00000563149 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
USB1-207ENST00000563149 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
USB1-207ENST00000563149 TMEM57Q8N5G2 664 aa16.54■□□□□ 0.24
USB1-207ENST00000563149 C22orf23Q9BZE7 217 aa16.53■□□□□ 0.24
USB1-207ENST00000563149 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
USB1-207ENST00000563149 LRRC7Q96NW7 1537 aa16.53■□□□□ 0.24
USB1-207ENST00000563149 ARHGAP45Q92619 1136 aa16.52■□□□□ 0.24
USB1-207ENST00000563149 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
USB1-207ENST00000563149 AGLP35573 1532 aa16.52■□□□□ 0.23
USB1-207ENST00000563149 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
USB1-207ENST00000563149 NUCB1Q02818 461 aa16.5■□□□□ 0.23
USB1-207ENST00000563149 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
USB1-207ENST00000563149 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
USB1-207ENST00000563149 NFE2L2Q16236 605 aa16.49■□□□□ 0.23
USB1-207ENST00000563149 SETD1AO15047 1707 aaKnown RBP16.49■□□□□ 0.23
USB1-207ENST00000563149 PRKAR2BP31323 418 aa16.49■□□□□ 0.23
USB1-207ENST00000563149 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
USB1-207ENST00000563149 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
USB1-207ENST00000563149 SPATA31D1Q6ZQQ2 1576 aa16.48■□□□□ 0.23
USB1-207ENST00000563149 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
USB1-207ENST00000563149 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
USB1-207ENST00000563149 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
USB1-207ENST00000563149 GNAI1P63096 354 aa16.48■□□□□ 0.23
USB1-207ENST00000563149 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
USB1-207ENST00000563149 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
USB1-207ENST00000563149 PTCH1Q13635 1447 aa16.47■□□□□ 0.23
USB1-207ENST00000563149 L1TD1Q5T7N2 865 aaKnown RBP16.47■□□□□ 0.23
USB1-207ENST00000563149 GCC1Q96CN9 775 aa16.47■□□□□ 0.23
USB1-207ENST00000563149 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
USB1-207ENST00000563149 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
USB1-207ENST00000563149 CDK12Q9NYV4 1490 aaPredicted RBP16.47■□□□□ 0.23
USB1-207ENST00000563149 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
USB1-207ENST00000563149 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
USB1-207ENST00000563149 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
USB1-207ENST00000563149 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
USB1-207ENST00000563149 MAP2P11137 1827 aaKnown RBP16.46■□□□□ 0.23
USB1-207ENST00000563149 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
USB1-207ENST00000563149 RBM25P49756 843 aaKnown RBP16.46■□□□□ 0.22
USB1-207ENST00000563149 LMOD3Q0VAK6 560 aa16.46■□□□□ 0.22
USB1-207ENST00000563149 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.22
USB1-207ENST00000563149 VAMP4O75379 141 aa16.45■□□□□ 0.22
USB1-207ENST00000563149 CHD1LQ86WJ1 897 aa16.45■□□□□ 0.22
USB1-207ENST00000563149 ZBTB7BO15156 539 aaPredicted RBP16.44■□□□□ 0.22
USB1-207ENST00000563149 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
USB1-207ENST00000563149 SNX21Q969T3 373 aa16.44■□□□□ 0.22
USB1-207ENST00000563149 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
USB1-207ENST00000563149 IL13P35225 146 aa16.43■□□□□ 0.22
USB1-207ENST00000563149 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
USB1-207ENST00000563149 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
USB1-207ENST00000563149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms