RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 COL9A1P20849 921 aa10.49□□□□□ -0.73
TCF4-213ENST00000562543 PROX2Q3B8N5 592 aa10.49□□□□□ -0.73
TCF4-213ENST00000562543 CDC42BPBQ9Y5S2 1711 aa10.48□□□□□ -0.73
TCF4-213ENST00000562543 PZPP20742 1482 aa10.48□□□□□ -0.73
TCF4-213ENST00000562543 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
TCF4-213ENST00000562543 ADGBQ8N7X0 1667 aa10.47□□□□□ -0.73
TCF4-213ENST00000562543 UTRNP46939 3433 aa10.46□□□□□ -0.73
TCF4-213ENST00000562543 ZNF784Q8NCA9 323 aaPredicted RBP10.46□□□□□ -0.73
TCF4-213ENST00000562543 BLMP54132 1417 aaPredicted RBP10.46□□□□□ -0.74
TCF4-213ENST00000562543 SAMD9LQ8IVG5 1584 aa10.46□□□□□ -0.74
TCF4-213ENST00000562543 ABCC3O15438 1527 aa10.45□□□□□ -0.74
TCF4-213ENST00000562543 PRDM15P57071 1507 aaPredicted RBP10.44□□□□□ -0.74
TCF4-213ENST00000562543 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
TCF4-213ENST00000562543 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
TCF4-213ENST00000562543 KDM5AP29375 1690 aaKnown RBP10.44□□□□□ -0.74
TCF4-213ENST00000562543 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
TCF4-213ENST00000562543 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
TCF4-213ENST00000562543 A2MP01023 1474 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 PPP1R3GB7ZBB8 358 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 DPYSL4O14531 572 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 GGT6Q6P531 493 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 DEFB132Q7Z7B7 95 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 PREX2Q70Z35 1606 aa10.42□□□□□ -0.74
TCF4-213ENST00000562543 INO80Q9ULG1 1556 aaPredicted RBP10.41□□□□□ -0.74
TCF4-213ENST00000562543 MSH6P52701 1360 aa10.4□□□□□ -0.74
TCF4-213ENST00000562543 PHF14O94880 888 aa10.4□□□□□ -0.74
TCF4-213ENST00000562543 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
TCF4-213ENST00000562543 C8orf37Q96NL8 207 aa10.4□□□□□ -0.74
TCF4-213ENST00000562543 UBR1Q8IWV7 1749 aa10.4□□□□□ -0.74
TCF4-213ENST00000562543 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.74
TCF4-213ENST00000562543 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
TCF4-213ENST00000562543 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
TCF4-213ENST00000562543 ARHGAP23Q9P227 1491 aa10.38□□□□□ -0.75
TCF4-213ENST00000562543 BCAMP50895 628 aa10.38□□□□□ -0.75
TCF4-213ENST00000562543 UNC13BO14795 1591 aa10.38□□□□□ -0.75
TCF4-213ENST00000562543 SLIT1O75093 1534 aa10.38□□□□□ -0.75
TCF4-213ENST00000562543 CAMK2BQ13554 666 aa10.37□□□□□ -0.75
TCF4-213ENST00000562543 DDX12PQ92771 950 aa10.37□□□□□ -0.75
TCF4-213ENST00000562543 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 ATRNO75882 1429 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 SEPT9Q9UHD8 586 aaPredicted RBP10.36□□□□□ -0.75
TCF4-213ENST00000562543 CAMTA1Q9Y6Y1 1673 aa10.36□□□□□ -0.75
TCF4-213ENST00000562543 MAST1Q9Y2H9 1570 aa10.35□□□□□ -0.75
TCF4-213ENST00000562543 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
TCF4-213ENST00000562543 SPHKAPQ2M3C7 1700 aa10.35□□□□□ -0.75
TCF4-213ENST00000562543 SETD5Q9C0A6 1442 aa10.34□□□□□ -0.75
TCF4-213ENST00000562543 KCNA6P17658 529 aa10.34□□□□□ -0.75
TCF4-213ENST00000562543 LTKP29376 864 aa10.34□□□□□ -0.75
TCF4-213ENST00000562543 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
TCF4-213ENST00000562543 TRPC5Q9UL62 973 aaPredicted RBP10.33□□□□□ -0.76
TCF4-213ENST00000562543 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
TCF4-213ENST00000562543 A0A0G2JS52 829 aa10.32□□□□□ -0.76
TCF4-213ENST00000562543 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
TCF4-213ENST00000562543 SYCP2Q9BX26 1530 aa10.32□□□□□ -0.76
TCF4-213ENST00000562543 TROQ12816 1431 aaPredicted RBP10.32□□□□□ -0.76
TCF4-213ENST00000562543 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
TCF4-213ENST00000562543 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
TCF4-213ENST00000562543 SOWAHBA6NEL2 793 aa10.3□□□□□ -0.76
TCF4-213ENST00000562543 EPAS1Q99814 870 aa10.3□□□□□ -0.76
TCF4-213ENST00000562543 WBP1LQ9NX94 342 aa10.3□□□□□ -0.76
TCF4-213ENST00000562543 CHD4Q14839 1912 aa10.3□□□□□ -0.76
TCF4-213ENST00000562543 CDC42BPAQ5VT25 1732 aa10.3□□□□□ -0.76
TCF4-213ENST00000562543 MROH1Q8NDA8 1641 aa10.29□□□□□ -0.76
TCF4-213ENST00000562543 NINLQ9Y2I6 1382 aa10.29□□□□□ -0.76
TCF4-213ENST00000562543 SF3B2Q13435 895 aaKnown RBP10.29□□□□□ -0.76
TCF4-213ENST00000562543 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
TCF4-213ENST00000562543 USP21Q9UK80 565 aa10.29□□□□□ -0.76
TCF4-213ENST00000562543 TET3O43151 1660 aa10.28□□□□□ -0.76
TCF4-213ENST00000562543 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
TCF4-213ENST00000562543 TRIM6-TRIM34B2RNG4 842 aa10.28□□□□□ -0.76
TCF4-213ENST00000562543 R3HDM1Q15032 1099 aaKnown RBP10.28□□□□□ -0.76
TCF4-213ENST00000562543 TXNDC2Q86VQ3 553 aa10.28□□□□□ -0.76
TCF4-213ENST00000562543 BBXQ8WY36 941 aaPredicted RBP10.28□□□□□ -0.76
TCF4-213ENST00000562543 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.27□□□□□ -0.76
TCF4-213ENST00000562543 LAPTM4BQ86VI4 370 aa10.27□□□□□ -0.77
TCF4-213ENST00000562543 ERVK-7P63135 1459 aa10.26□□□□□ -0.77
TCF4-213ENST00000562543 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
TCF4-213ENST00000562543 NBR1Q14596 966 aa10.26□□□□□ -0.77
TCF4-213ENST00000562543 FNBP4Q8N3X1 1017 aaPredicted RBP10.26□□□□□ -0.77
TCF4-213ENST00000562543 ASXL1Q8IXJ9 1541 aa10.26□□□□□ -0.77
TCF4-213ENST00000562543 CLIP1P30622 1438 aa10.25□□□□□ -0.77
TCF4-213ENST00000562543 RALGAPBQ86X10 1494 aa10.25□□□□□ -0.77
TCF4-213ENST00000562543 NCOA3Q9Y6Q9 1424 aa10.24□□□□□ -0.77
TCF4-213ENST00000562543 MAP3K7O43318 606 aa10.24□□□□□ -0.77
TCF4-213ENST00000562543 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
TCF4-213ENST00000562543 GIGYF1O75420 1035 aaPredicted RBP10.24□□□□□ -0.77
TCF4-213ENST00000562543 BRINP3Q76B58 766 aa10.24□□□□□ -0.77
TCF4-213ENST00000562543 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
TCF4-213ENST00000562543 TSKSQ9UJT2 592 aa10.24□□□□□ -0.77
TCF4-213ENST00000562543 CHD2O14647 1828 aaKnown RBP10.23□□□□□ -0.77
TCF4-213ENST00000562543 GLI3P10071 1580 aa10.23□□□□□ -0.77
TCF4-213ENST00000562543 RGS20O76081 388 aa10.23□□□□□ -0.77
TCF4-213ENST00000562543 ADAMTS2O95450 1211 aa10.23□□□□□ -0.77
TCF4-213ENST00000562543 ITGBL1O95965 494 aaPredicted RBP10.23□□□□□ -0.77
TCF4-213ENST00000562543 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms