RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 FAM187AA6NFU0 413 aa7.52□□□□□ -1.21
CAPN3-211ENST00000562199 GDF9O60383 454 aa7.52□□□□□ -1.21
CAPN3-211ENST00000562199 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
CAPN3-211ENST00000562199 AEBP1Q8IUX7 1158 aa7.52□□□□□ -1.21
CAPN3-211ENST00000562199 KDM4AO75164 1064 aa7.51□□□□□ -1.21
CAPN3-211ENST00000562199 SECISBP2LQ93073 1101 aaKnown RBP7.51□□□□□ -1.21
CAPN3-211ENST00000562199 DNAJC2Q99543 621 aaKnown RBP7.51□□□□□ -1.21
CAPN3-211ENST00000562199 BAZ1AQ9NRL2 1556 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-211ENST00000562199 DGAT1O75907 488 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 NEFMP07197 916 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 CD46P15529 392 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 PRR20EP86478 221 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 PRR20CP86479 221 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 PRR20DP86480 221 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 PRR20BP86481 221 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 PRR20AP86496 221 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 WWC1Q8IX03 1113 aa7.5□□□□□ -1.21
CAPN3-211ENST00000562199 MINK1Q8N4C8 1332 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-211ENST00000562199 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
CAPN3-211ENST00000562199 HLA-CQ95604 372 aa7.49□□□□□ -1.21
CAPN3-211ENST00000562199 CCDC102AQ96A19 550 aa7.49□□□□□ -1.21
CAPN3-211ENST00000562199 CADPSQ9ULU8 1353 aa7.48□□□□□ -1.21
CAPN3-211ENST00000562199 PTMAP06454 111 aaKnown RBP7.48□□□□□ -1.21
CAPN3-211ENST00000562199 GPATCH11Q8N954 259 aa7.48□□□□□ -1.21
CAPN3-211ENST00000562199 PKD2L1Q9P0L9 805 aa7.48□□□□□ -1.21
CAPN3-211ENST00000562199 NACADO15069 1562 aa7.47□□□□□ -1.21
CAPN3-211ENST00000562199 WRNQ14191 1432 aaPredicted RBP eCLIP7.47□□□□□ -1.21
CAPN3-211ENST00000562199 ZBTB24O43167 697 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-211ENST00000562199 RPIAP49247 311 aa7.47□□□□□ -1.21
CAPN3-211ENST00000562199 HSP90AB4PQ58FF6 505 aa7.47□□□□□ -1.21
CAPN3-211ENST00000562199 FAM43BQ6ZT52 329 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-211ENST00000562199 EXOC8Q8IYI6 725 aa7.47□□□□□ -1.21
CAPN3-211ENST00000562199 GZF1Q9H116 711 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-211ENST00000562199 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
CAPN3-211ENST00000562199 POTECB2RU33 542 aa7.46□□□□□ -1.22
CAPN3-211ENST00000562199 Q3C1V9 767 aa7.46□□□□□ -1.22
CAPN3-211ENST00000562199 FTSJ3Q8IY81 847 aaKnown RBP7.46□□□□□ -1.22
CAPN3-211ENST00000562199 KRI1Q8N9T8 703 aaKnown RBP7.46□□□□□ -1.22
CAPN3-211ENST00000562199 MROH2BQ7Z745 1585 aa7.46□□□□□ -1.22
CAPN3-211ENST00000562199 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
CAPN3-211ENST00000562199 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
CAPN3-211ENST00000562199 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
CAPN3-211ENST00000562199 LMOD2Q6P5Q4 547 aa7.45□□□□□ -1.22
CAPN3-211ENST00000562199 CYP4X1Q8N118 509 aa7.44□□□□□ -1.22
CAPN3-211ENST00000562199 CCDC24Q8N4L8 307 aa7.44□□□□□ -1.22
CAPN3-211ENST00000562199 CCDC82Q8N4S0 544 aa7.44□□□□□ -1.22
CAPN3-211ENST00000562199 SYMPKQ92797 1274 aaKnown RBP7.44□□□□□ -1.22
CAPN3-211ENST00000562199 USB1Q9BQ65 265 aaKnown RBP7.44□□□□□ -1.22
CAPN3-211ENST00000562199 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
CAPN3-211ENST00000562199 KCNG1Q9UIX4 513 aa7.44□□□□□ -1.22
CAPN3-211ENST00000562199 LOC102724159A0A0B4J2E5 919 aa7.43□□□□□ -1.22
CAPN3-211ENST00000562199 PWP2Q15269 919 aaKnown RBP7.43□□□□□ -1.22
CAPN3-211ENST00000562199 ZNF775Q96BV0 537 aaPredicted RBP7.43□□□□□ -1.22
CAPN3-211ENST00000562199 WIZO95785 1651 aa7.43□□□□□ -1.22
CAPN3-211ENST00000562199 CECR2Q9BXF3 1484 aa7.43□□□□□ -1.22
CAPN3-211ENST00000562199 HOXA2O43364 376 aa7.42□□□□□ -1.22
CAPN3-211ENST00000562199 CLCN1P35523 988 aa7.42□□□□□ -1.22
CAPN3-211ENST00000562199 NUTM1Q86Y26 1132 aa7.42□□□□□ -1.22
CAPN3-211ENST00000562199 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
CAPN3-211ENST00000562199 AAASQ9NRG9 546 aa7.42□□□□□ -1.22
CAPN3-211ENST00000562199 FAM217BQ9NTX9 383 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-211ENST00000562199 TTC24A2A3L6 582 aaPredicted RBP7.41□□□□□ -1.22
CAPN3-211ENST00000562199 PLEKHD1A6NEE1 506 aa7.41□□□□□ -1.22
CAPN3-211ENST00000562199 CANXP27824 592 aaKnown RBP7.41□□□□□ -1.22
CAPN3-211ENST00000562199 MMP16P51512 607 aa7.41□□□□□ -1.22
CAPN3-211ENST00000562199 USP46P62068 366 aa7.41□□□□□ -1.22
CAPN3-211ENST00000562199 TOR4AQ9NXH8 423 aa7.41□□□□□ -1.22
CAPN3-211ENST00000562199 RIPOR2Q9Y4F9 1068 aa7.41□□□□□ -1.22
CAPN3-211ENST00000562199 NEUROD1Q13562 356 aa7.4□□□□□ -1.22
CAPN3-211ENST00000562199 DACH1Q9UI36 760 aa7.4□□□□□ -1.22
CAPN3-211ENST00000562199 TOP2AP11388 1531 aaKnown RBP7.4□□□□□ -1.22
CAPN3-211ENST00000562199 TRIM32Q13049 653 aa7.39□□□□□ -1.23
CAPN3-211ENST00000562199 DXOO77932 396 aaKnown RBP7.38□□□□□ -1.23
CAPN3-211ENST00000562199 SSTR3P32745 418 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-211ENST00000562199 OS9Q13438 667 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-211ENST00000562199 TMTC2Q8N394 836 aa7.38□□□□□ -1.23
CAPN3-211ENST00000562199 LAS1LQ9Y4W2 734 aaKnown RBP7.38□□□□□ -1.23
CAPN3-211ENST00000562199 EEA1Q15075 1411 aa7.37□□□□□ -1.23
CAPN3-211ENST00000562199 FAM193AP78312 1265 aa7.37□□□□□ -1.23
CAPN3-211ENST00000562199 TTLL12Q14166 644 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-211ENST00000562199 FAM50AQ14320 339 aaKnown RBP7.37□□□□□ -1.23
CAPN3-211ENST00000562199 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
CAPN3-211ENST00000562199 CHMP4BQ9H444 224 aaKnown RBP7.37□□□□□ -1.23
CAPN3-211ENST00000562199 SLC24A3Q9HC58 644 aa7.37□□□□□ -1.23
CAPN3-211ENST00000562199 CEP162Q5TB80 1403 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 C6orf229H3BNL8 230 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 WNT7AO00755 349 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 AXIN1O15169 862 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 BARGINQ6ZT62 677 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 ANKRD13AQ8IZ07 590 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 ZC3H15Q8WU90 426 aaKnown RBP7.36□□□□□ -1.23
CAPN3-211ENST00000562199 MRGPRX2Q96LB1 330 aa7.36□□□□□ -1.23
CAPN3-211ENST00000562199 J3QL48 77 aa7.35□□□□□ -1.23
CAPN3-211ENST00000562199 ZMYND10O75800 440 aa7.35□□□□□ -1.23
CAPN3-211ENST00000562199 FDX1P10109 184 aa7.35□□□□□ -1.23
CAPN3-211ENST00000562199 NDUFV2P19404 249 aa7.35□□□□□ -1.23
CAPN3-211ENST00000562199 DIEXFQ68CQ4 756 aaKnown RBP7.35□□□□□ -1.23
CAPN3-211ENST00000562199 NOL8Q76FK4 1167 aaKnown RBP7.35□□□□□ -1.23
CAPN3-211ENST00000562199 SNIP1Q8TAD8 396 aaKnown RBP7.35□□□□□ -1.23
CAPN3-211ENST00000562199 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms