RNA–Protein interactions for RNA: ENST00000562047.1

EDC3-203, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-203ENST00000562047 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
EDC3-203ENST00000562047 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
EDC3-203ENST00000562047 PPIP5K1Q6PFW1 1433 aa15.84■□□□□ 0.13
EDC3-203ENST00000562047 MARF1Q9Y4F3 1742 aaKnown RBP15.83■□□□□ 0.13
EDC3-203ENST00000562047 UNC5CLQ8IV45 518 aa15.83■□□□□ 0.12
EDC3-203ENST00000562047 SBNO2Q9Y2G9 1366 aa15.83■□□□□ 0.12
EDC3-203ENST00000562047 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
EDC3-203ENST00000562047 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
EDC3-203ENST00000562047 TOPAZ1Q8N9V7 1692 aa15.82■□□□□ 0.12
EDC3-203ENST00000562047 ATRNO75882 1429 aa15.81■□□□□ 0.12
EDC3-203ENST00000562047 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
EDC3-203ENST00000562047 ATAD2Q6PL18 1390 aa15.81■□□□□ 0.12
EDC3-203ENST00000562047 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
EDC3-203ENST00000562047 ALS2Q96Q42 1657 aa15.81■□□□□ 0.12
EDC3-203ENST00000562047 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
EDC3-203ENST00000562047 SLIT2O94813 1529 aa15.8■□□□□ 0.12
EDC3-203ENST00000562047 ABTB2Q8N961 1025 aa15.8■□□□□ 0.12
EDC3-203ENST00000562047 GJD4Q96KN9 370 aaPredicted RBP15.79■□□□□ 0.12
EDC3-203ENST00000562047 NLRP13Q86W25 1043 aa15.78■□□□□ 0.12
EDC3-203ENST00000562047 FAM83GA6ND36 823 aa15.77■□□□□ 0.12
EDC3-203ENST00000562047 PUS7Q96PZ0 661 aaKnown RBP15.77■□□□□ 0.12
EDC3-203ENST00000562047 VPS72Q15906 364 aa15.76■□□□□ 0.11
EDC3-203ENST00000562047 PRDM11Q9NQV5 511 aa15.76■□□□□ 0.11
EDC3-203ENST00000562047 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.76■□□□□ 0.11
EDC3-203ENST00000562047 ABCA3Q99758 1704 aa15.75■□□□□ 0.11
EDC3-203ENST00000562047 CCER1Q8TC90 406 aaPredicted RBP15.75■□□□□ 0.11
EDC3-203ENST00000562047 BTG4Q9NY30 223 aa15.75■□□□□ 0.11
EDC3-203ENST00000562047 RGS12O14924 1447 aa15.75■□□□□ 0.11
EDC3-203ENST00000562047 USP6P35125 1406 aa15.75■□□□□ 0.11
EDC3-203ENST00000562047 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
EDC3-203ENST00000562047 NUTM2GQ5VZR2 741 aa15.74■□□□□ 0.11
EDC3-203ENST00000562047 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
EDC3-203ENST00000562047 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
EDC3-203ENST00000562047 EP400Q96L91 3159 aa15.73■□□□□ 0.11
EDC3-203ENST00000562047 NLRP6P59044 892 aa15.72■□□□□ 0.11
EDC3-203ENST00000562047 COL14A1Q05707 1796 aaKnown RBP15.72■□□□□ 0.11
EDC3-203ENST00000562047 USP19O94966 1318 aa15.71■□□□□ 0.11
EDC3-203ENST00000562047 TTC21AQ8NDW8 1320 aa15.71■□□□□ 0.11
EDC3-203ENST00000562047 GCP02774 474 aa15.71■□□□□ 0.11
EDC3-203ENST00000562047 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
EDC3-203ENST00000562047 HDGFL2Q7Z4V5 671 aaPredicted RBP15.71■□□□□ 0.11
EDC3-203ENST00000562047 UPF1Q92900 1129 aaKnown RBP eCLIP15.71■□□□□ 0.11
EDC3-203ENST00000562047 TERF2IPQ9NYB0 399 aa15.71■□□□□ 0.11
EDC3-203ENST00000562047 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
EDC3-203ENST00000562047 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
EDC3-203ENST00000562047 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
EDC3-203ENST00000562047 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
EDC3-203ENST00000562047 CPDO75976 1380 aa15.7■□□□□ 0.1
EDC3-203ENST00000562047 NINLQ9Y2I6 1382 aa15.7■□□□□ 0.1
EDC3-203ENST00000562047 TTC21BQ7Z4L5 1316 aa15.69■□□□□ 0.1
EDC3-203ENST00000562047 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
EDC3-203ENST00000562047 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
EDC3-203ENST00000562047 CDCA8Q53HL2 280 aa15.69■□□□□ 0.1
EDC3-203ENST00000562047 TESK2Q96S53 571 aa15.69■□□□□ 0.1
EDC3-203ENST00000562047 SSH2Q76I76 1423 aa15.68■□□□□ 0.1
EDC3-203ENST00000562047 CRYBG1Q9Y4K1 1723 aa15.68■□□□□ 0.1
EDC3-203ENST00000562047 USP47Q96K76 1375 aa15.68■□□□□ 0.1
EDC3-203ENST00000562047 TMF1P82094 1093 aa15.68■□□□□ 0.1
EDC3-203ENST00000562047 KCNH5Q8NCM2 988 aa15.68■□□□□ 0.1
EDC3-203ENST00000562047 EVA1CP58658 441 aa15.67■□□□□ 0.1
EDC3-203ENST00000562047 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
EDC3-203ENST00000562047 CHRNA2Q15822 529 aa15.66■□□□□ 0.1
EDC3-203ENST00000562047 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
EDC3-203ENST00000562047 SEPT12Q8IYM1 358 aa15.66■□□□□ 0.1
EDC3-203ENST00000562047 GLI3P10071 1580 aa15.66■□□□□ 0.1
EDC3-203ENST00000562047 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
EDC3-203ENST00000562047 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
EDC3-203ENST00000562047 SLC12A5Q9H2X9 1139 aa15.65■□□□□ 0.1
EDC3-203ENST00000562047 AKAP12Q02952 1782 aa15.64■□□□□ 0.1
EDC3-203ENST00000562047 A0A0G2JS52 829 aa15.64■□□□□ 0.09
EDC3-203ENST00000562047 MYT1Q01538 1121 aa15.64■□□□□ 0.09
EDC3-203ENST00000562047 NRKQ7Z2Y5 1582 aa15.64■□□□□ 0.09
EDC3-203ENST00000562047 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
EDC3-203ENST00000562047 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
EDC3-203ENST00000562047 FAM98CQ17RN3 349 aaKnown RBP15.63■□□□□ 0.09
EDC3-203ENST00000562047 NRAPQ86VF7 1730 aa15.63■□□□□ 0.09
EDC3-203ENST00000562047 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
EDC3-203ENST00000562047 KRT27Q7Z3Y8 459 aa15.62■□□□□ 0.09
EDC3-203ENST00000562047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.62■□□□□ 0.09
EDC3-203ENST00000562047 SLIT3O75094 1523 aa15.62■□□□□ 0.09
EDC3-203ENST00000562047 SPATA31A1Q5TZJ5 1347 aa15.62■□□□□ 0.09
EDC3-203ENST00000562047 PIK3C2AO00443 1686 aa15.61■□□□□ 0.09
EDC3-203ENST00000562047 CD163L1Q9NR16 1453 aa15.6■□□□□ 0.09
EDC3-203ENST00000562047 THRAP3Q9Y2W1 955 aaKnown RBP15.6■□□□□ 0.09
EDC3-203ENST00000562047 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
EDC3-203ENST00000562047 USP31Q70CQ4 1352 aa15.6■□□□□ 0.09
EDC3-203ENST00000562047 MON2Q7Z3U7 1717 aa15.6■□□□□ 0.09
EDC3-203ENST00000562047 ZBTB7CA1YPR0 619 aa15.59■□□□□ 0.09
EDC3-203ENST00000562047 BARGINQ6ZT62 677 aa15.59■□□□□ 0.09
EDC3-203ENST00000562047 ARHGEF25Q86VW2 580 aa15.59■□□□□ 0.09
EDC3-203ENST00000562047 CAMTA1Q9Y6Y1 1673 aa15.58■□□□□ 0.08
EDC3-203ENST00000562047 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
EDC3-203ENST00000562047 TCP11L2Q8N4U5 519 aa15.58■□□□□ 0.08
EDC3-203ENST00000562047 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.08
EDC3-203ENST00000562047 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
EDC3-203ENST00000562047 LARP1Q6PKG0 1096 aaKnown RBP15.57■□□□□ 0.08
EDC3-203ENST00000562047 NME9Q86XW9 330 aa15.57■□□□□ 0.08
EDC3-203ENST00000562047 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
EDC3-203ENST00000562047 ANKRD36BQ8N2N9 1353 aa15.57■□□□□ 0.08
EDC3-203ENST00000562047 LMO7Q8WWI1 1683 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms