RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 ABCC11Q96J66 1382 aa14.02□□□□□ -0.16
NEIL1-202ENST00000561643 TERF2IPQ9NYB0 399 aa14.02□□□□□ -0.16
NEIL1-202ENST00000561643 AAMPQ13685 434 aa14.02□□□□□ -0.17
NEIL1-202ENST00000561643 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
NEIL1-202ENST00000561643 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
NEIL1-202ENST00000561643 FAM43AQ8N2R8 423 aa14.01□□□□□ -0.17
NEIL1-202ENST00000561643 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
NEIL1-202ENST00000561643 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
NEIL1-202ENST00000561643 TSR2Q969E8 191 aaKnown RBP14□□□□□ -0.17
NEIL1-202ENST00000561643 FTSJ3Q8IY81 847 aaKnown RBP14□□□□□ -0.17
NEIL1-202ENST00000561643 FBXO31Q5XUX0 539 aaPredicted RBP13.99□□□□□ -0.17
NEIL1-202ENST00000561643 FYB1O15117 783 aa13.99□□□□□ -0.17
NEIL1-202ENST00000561643 RICTORQ6R327 1708 aa13.99□□□□□ -0.17
NEIL1-202ENST00000561643 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
NEIL1-202ENST00000561643 HDGFL2Q7Z4V5 671 aaPredicted RBP13.98□□□□□ -0.17
NEIL1-202ENST00000561643 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
NEIL1-202ENST00000561643 TMPOP42166 694 aaKnown RBP13.98□□□□□ -0.17
NEIL1-202ENST00000561643 RWDD1Q9H446 243 aaPredicted RBP13.98□□□□□ -0.17
NEIL1-202ENST00000561643 PTPRMP28827 1452 aa13.98□□□□□ -0.17
NEIL1-202ENST00000561643 FRAT2O75474 233 aaPredicted RBP13.97□□□□□ -0.17
NEIL1-202ENST00000561643 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
NEIL1-202ENST00000561643 EXOSC9Q06265 439 aaKnown RBP13.97□□□□□ -0.17
NEIL1-202ENST00000561643 MVPQ14764 893 aaKnown RBP13.97□□□□□ -0.17
NEIL1-202ENST00000561643 PLEKHF1Q96S99 279 aa13.97□□□□□ -0.17
NEIL1-202ENST00000561643 ADGRB2O60241 1585 aa13.97□□□□□ -0.17
NEIL1-202ENST00000561643 CT47B1P0C2W7 299 aaPredicted RBP13.96□□□□□ -0.17
NEIL1-202ENST00000561643 DZIP1LQ8IYY4 767 aaKnown RBP13.96□□□□□ -0.17
NEIL1-202ENST00000561643 MYO5BQ9ULV0 1848 aa13.96□□□□□ -0.17
NEIL1-202ENST00000561643 TMEM131LA2VDJ0 1609 aa13.96□□□□□ -0.17
NEIL1-202ENST00000561643 TSPOAP1O95153 1857 aa13.96□□□□□ -0.17
NEIL1-202ENST00000561643 CDK19Q9BWU1 502 aa13.96□□□□□ -0.17
NEIL1-202ENST00000561643 PDZRN3Q9UPQ7 1066 aa13.96□□□□□ -0.17
NEIL1-202ENST00000561643 PREX1Q8TCU6 1659 aa13.96□□□□□ -0.17
NEIL1-202ENST00000561643 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
NEIL1-202ENST00000561643 SEC24BO95487 1268 aa13.95□□□□□ -0.18
NEIL1-202ENST00000561643 CABP1Q9NZU7 370 aa13.95□□□□□ -0.18
NEIL1-202ENST00000561643 TRIM35Q9UPQ4 493 aa13.95□□□□□ -0.18
NEIL1-202ENST00000561643 RIPK4P57078 832 aa13.95□□□□□ -0.18
NEIL1-202ENST00000561643 USP19O94966 1318 aa13.94□□□□□ -0.18
NEIL1-202ENST00000561643 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
NEIL1-202ENST00000561643 UPF2Q9HAU5 1272 aaKnown RBP13.93□□□□□ -0.18
NEIL1-202ENST00000561643 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
NEIL1-202ENST00000561643 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
NEIL1-202ENST00000561643 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
NEIL1-202ENST00000561643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.93□□□□□ -0.18
NEIL1-202ENST00000561643 MED14O60244 1454 aa13.92□□□□□ -0.18
NEIL1-202ENST00000561643 ITPRIPQ8IWB1 547 aa13.92□□□□□ -0.18
NEIL1-202ENST00000561643 TRIM27P14373 513 aa13.92□□□□□ -0.18
NEIL1-202ENST00000561643 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
NEIL1-202ENST00000561643 NLRP1Q9C000 1473 aa13.92□□□□□ -0.18
NEIL1-202ENST00000561643 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
NEIL1-202ENST00000561643 BECN1Q14457 450 aa13.91□□□□□ -0.18
NEIL1-202ENST00000561643 ALKQ9UM73 1620 aa13.91□□□□□ -0.18
NEIL1-202ENST00000561643 IL16Q14005 1332 aa13.91□□□□□ -0.18
NEIL1-202ENST00000561643 RBM10P98175 930 aaKnown RBP13.9□□□□□ -0.18
NEIL1-202ENST00000561643 ATF7IPQ6VMQ6 1270 aa13.9□□□□□ -0.18
NEIL1-202ENST00000561643 DDX19BQ9UMR2 479 aa13.9□□□□□ -0.18
NEIL1-202ENST00000561643 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
NEIL1-202ENST00000561643 NOB1Q9ULX3 412 aaKnown RBP13.9□□□□□ -0.18
NEIL1-202ENST00000561643 CLTCQ00610 1675 aaKnown RBP13.9□□□□□ -0.19
NEIL1-202ENST00000561643 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.19
NEIL1-202ENST00000561643 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
NEIL1-202ENST00000561643 ANKRD26Q9UPS8 1709 aa13.88□□□□□ -0.19
NEIL1-202ENST00000561643 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
NEIL1-202ENST00000561643 FBLN1P23142 703 aa13.88□□□□□ -0.19
NEIL1-202ENST00000561643 FCHSD2O94868 740 aa13.88□□□□□ -0.19
NEIL1-202ENST00000561643 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
NEIL1-202ENST00000561643 KIF16BQ96L93 1317 aa13.87□□□□□ -0.19
NEIL1-202ENST00000561643 IPO8O15397 1037 aaKnown RBP13.87□□□□□ -0.19
NEIL1-202ENST00000561643 TMEM57Q8N5G2 664 aa13.87□□□□□ -0.19
NEIL1-202ENST00000561643 NAP1L5Q96NT1 182 aaPredicted RBP13.87□□□□□ -0.19
NEIL1-202ENST00000561643 ARXQ96QS3 562 aa13.87□□□□□ -0.19
NEIL1-202ENST00000561643 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
NEIL1-202ENST00000561643 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
NEIL1-202ENST00000561643 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
NEIL1-202ENST00000561643 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
NEIL1-202ENST00000561643 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
NEIL1-202ENST00000561643 HMOX1P09601 288 aa13.85□□□□□ -0.19
NEIL1-202ENST00000561643 PDE4CQ08493 712 aa13.84□□□□□ -0.19
NEIL1-202ENST00000561643 PPP6R1Q9UPN7 881 aa13.84□□□□□ -0.19
NEIL1-202ENST00000561643 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
NEIL1-202ENST00000561643 A2ML1A8K2U0 1454 aa13.84□□□□□ -0.19
NEIL1-202ENST00000561643 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
NEIL1-202ENST00000561643 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
NEIL1-202ENST00000561643 ATP7BP35670 1465 aa13.83□□□□□ -0.2
NEIL1-202ENST00000561643 HSP90AA2PQ14568 343 aaPredicted RBP13.83□□□□□ -0.2
NEIL1-202ENST00000561643 ZBTB40Q9NUA8 1239 aa13.82□□□□□ -0.2
NEIL1-202ENST00000561643 EMILIN1Q9Y6C2 1016 aa13.82□□□□□ -0.2
NEIL1-202ENST00000561643 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
NEIL1-202ENST00000561643 NFE2L2Q16236 605 aa13.82□□□□□ -0.2
NEIL1-202ENST00000561643 DLC1Q96QB1 1528 aa13.82□□□□□ -0.2
NEIL1-202ENST00000561643 PHACTR3Q96KR7 559 aa13.82□□□□□ -0.2
NEIL1-202ENST00000561643 THUMPD2Q9BTF0 503 aaKnown RBP13.82□□□□□ -0.2
NEIL1-202ENST00000561643 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
NEIL1-202ENST00000561643 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
NEIL1-202ENST00000561643 NME9Q86XW9 330 aa13.81□□□□□ -0.2
NEIL1-202ENST00000561643 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
NEIL1-202ENST00000561643 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
NEIL1-202ENST00000561643 CALD1Q05682 793 aaKnown RBP13.81□□□□□ -0.2
NEIL1-202ENST00000561643 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms