RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 STRCP1A6NGW2 1772 aa15.09■□□□□ 0.01
PKM-205ENST00000561609 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
PKM-205ENST00000561609 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0
PKM-205ENST00000561609 RBM33Q96EV2 1170 aaKnown RBP15.08■□□□□ 0
PKM-205ENST00000561609 PROSER2Q86WR7 435 aaPredicted RBP15.07■□□□□ 0
PKM-205ENST00000561609 AATKQ6ZMQ8 1374 aa15.07■□□□□ 0
PKM-205ENST00000561609 OVOS2A0A0J9YW53 1432 aa15.07■□□□□ 0
PKM-205ENST00000561609 OVOS2Q6IE36 1432 aa15.07■□□□□ 0
PKM-205ENST00000561609 PNPLA6Q8IY17 1366 aa15.07■□□□□ 0
PKM-205ENST00000561609 TTC21AQ8NDW8 1320 aa15.07■□□□□ 0
PKM-205ENST00000561609 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
PKM-205ENST00000561609 COG3Q96JB2 828 aa15.07■□□□□ 0
PKM-205ENST00000561609 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
PKM-205ENST00000561609 SMG6Q86US8 1419 aaKnown RBP15.06■□□□□ 0
PKM-205ENST00000561609 NCOA3Q9Y6Q9 1424 aa15.06■□□□□ 0
PKM-205ENST00000561609 MAP2P11137 1827 aaKnown RBP15.06■□□□□ 0
PKM-205ENST00000561609 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
PKM-205ENST00000561609 POLKQ9UBT6 870 aa15.04■□□□□ -0
PKM-205ENST00000561609 C14orf37Q86TY3 774 aa15.03■□□□□ -0
PKM-205ENST00000561609 PHF8Q9UPP1 1060 aa15.03■□□□□ -0
PKM-205ENST00000561609 PIK3C2AO00443 1686 aa15.03■□□□□ -0
PKM-205ENST00000561609 USP54Q70EL1 1684 aa15.03■□□□□ -0
PKM-205ENST00000561609 USP31Q70CQ4 1352 aa15.03■□□□□ -0
PKM-205ENST00000561609 PDE3BQ13370 1112 aa15.02■□□□□ -0
PKM-205ENST00000561609 NUDCQ9Y266 331 aa15.02■□□□□ -0
PKM-205ENST00000561609 CDK12Q9NYV4 1490 aaPredicted RBP15.02□□□□□ -0.01
PKM-205ENST00000561609 C19orf44Q9H6X5 657 aa15.02□□□□□ -0.01
PKM-205ENST00000561609 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
PKM-205ENST00000561609 FBLN1P23142 703 aa15.01□□□□□ -0.01
PKM-205ENST00000561609 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
PKM-205ENST00000561609 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
PKM-205ENST00000561609 DCCP43146 1447 aa15.01□□□□□ -0.01
PKM-205ENST00000561609 LRRC7Q96NW7 1537 aa15□□□□□ -0.01
PKM-205ENST00000561609 ZNF521Q96K83 1311 aa15□□□□□ -0.01
PKM-205ENST00000561609 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
PKM-205ENST00000561609 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
PKM-205ENST00000561609 EMILIN1Q9Y6C2 1016 aa14.99□□□□□ -0.01
PKM-205ENST00000561609 IQSEC2Q5JU85 1478 aa14.99□□□□□ -0.01
PKM-205ENST00000561609 MARF1Q9Y4F3 1742 aaKnown RBP14.99□□□□□ -0.01
PKM-205ENST00000561609 KIF1AQ12756 1690 aa14.99□□□□□ -0.01
PKM-205ENST00000561609 APAF1O14727 1248 aa14.98□□□□□ -0.01
PKM-205ENST00000561609 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
PKM-205ENST00000561609 RUNDC1Q96C34 613 aa14.98□□□□□ -0.01
PKM-205ENST00000561609 C1orf167Q5SNV9 1468 aa14.98□□□□□ -0.01
PKM-205ENST00000561609 U2AF1L5P0DN76 240 aaPredicted RBP14.98□□□□□ -0.01
PKM-205ENST00000561609 U2AF1Q01081 240 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■□□□□ 9
PKM-205ENST00000561609 XIRP1Q702N8 1843 aaKnown RBP14.98□□□□□ -0.01
PKM-205ENST00000561609 MST1RQ04912 1400 aa14.96□□□□□ -0.01
PKM-205ENST00000561609 PPM1GO15355 546 aaPredicted RBP14.96□□□□□ -0.01
PKM-205ENST00000561609 RRS1Q15050 365 aaKnown RBP14.96□□□□□ -0.01
PKM-205ENST00000561609 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
PKM-205ENST00000561609 ORAI2Q96SN7 254 aa14.95□□□□□ -0.02
PKM-205ENST00000561609 PEAK1Q9H792 1746 aa14.95□□□□□ -0.02
PKM-205ENST00000561609 U2SURPO15042 1029 aaKnown RBP14.94□□□□□ -0.02
PKM-205ENST00000561609 ATF3P18847 181 aa14.94□□□□□ -0.02
PKM-205ENST00000561609 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
PKM-205ENST00000561609 CDCA7LQ96GN5 454 aa14.94□□□□□ -0.02
PKM-205ENST00000561609 IL13P35225 146 aa14.94□□□□□ -0.02
PKM-205ENST00000561609 PSME1Q06323 249 aa14.94□□□□□ -0.02
PKM-205ENST00000561609 PLEKHF1Q96S99 279 aa14.94□□□□□ -0.02
PKM-205ENST00000561609 TRPM3Q9HCF6 1732 aaPredicted RBP14.93□□□□□ -0.02
PKM-205ENST00000561609 MSH6P52701 1360 aa14.93□□□□□ -0.02
PKM-205ENST00000561609 NLRP6P59044 892 aa14.93□□□□□ -0.02
PKM-205ENST00000561609 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
PKM-205ENST00000561609 TCP11L2Q8N4U5 519 aa14.93□□□□□ -0.02
PKM-205ENST00000561609 ABTB2Q8N961 1025 aa14.93□□□□□ -0.02
PKM-205ENST00000561609 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
PKM-205ENST00000561609 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
PKM-205ENST00000561609 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
PKM-205ENST00000561609 ZNF335Q9H4Z2 1342 aaPredicted RBP14.92□□□□□ -0.02
PKM-205ENST00000561609 FCHSD2O94868 740 aa14.91□□□□□ -0.02
PKM-205ENST00000561609 NEFLP07196 543 aa14.91□□□□□ -0.02
PKM-205ENST00000561609 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
PKM-205ENST00000561609 FOXO3O43524 673 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 CCDC27Q2M243 656 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 DMRT2Q9Y5R5 561 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 SBNO1A3KN83 1393 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 KIF24Q5T7B8 1368 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 FKBP8Q14318 412 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 WWC1Q8IX03 1113 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
PKM-205ENST00000561609 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
PKM-205ENST00000561609 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
PKM-205ENST00000561609 NUTM2GQ5VZR2 741 aa14.89□□□□□ -0.03
PKM-205ENST00000561609 TRMT2AQ8IZ69 625 aaKnown RBP14.89□□□□□ -0.03
PKM-205ENST00000561609 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
PKM-205ENST00000561609 FLT4P35916 1363 aa14.89□□□□□ -0.03
PKM-205ENST00000561609 NFAT5O94916 1531 aa14.88□□□□□ -0.03
PKM-205ENST00000561609 EIF4A2Q14240 407 aaKnown RBP14.88□□□□□ -0.03
PKM-205ENST00000561609 DUSP27Q5VZP5 1158 aa14.88□□□□□ -0.03
PKM-205ENST00000561609 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
PKM-205ENST00000561609 SOX12O15370 315 aa14.87□□□□□ -0.03
PKM-205ENST00000561609 RRP7AQ9Y3A4 280 aaKnown RBP14.87□□□□□ -0.03
PKM-205ENST00000561609 MAPK8IP3Q9UPT6 1336 aa14.87□□□□□ -0.03
PKM-205ENST00000561609 SLIT3O75094 1523 aa14.87□□□□□ -0.03
PKM-205ENST00000561609 ALS2Q96Q42 1657 aa14.87□□□□□ -0.03
PKM-205ENST00000561609 E9PSI1 815 aa14.86□□□□□ -0.03
PKM-205ENST00000561609 TMPOP42166 694 aaKnown RBP14.86□□□□□ -0.03
PKM-205ENST00000561609 HSP90AB2PQ58FF8 381 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 488.5 ms