RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
LINC00566-201ENST00000561557 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
LINC00566-201ENST00000561557 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
LINC00566-201ENST00000561557 ATMINO43313 823 aaPredicted RBP13.6□□□□□ -0.23
LINC00566-201ENST00000561557 ADGRB2O60241 1585 aa13.6□□□□□ -0.23
LINC00566-201ENST00000561557 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
LINC00566-201ENST00000561557 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
LINC00566-201ENST00000561557 ANKARQ7Z5J8 1434 aa13.58□□□□□ -0.24
LINC00566-201ENST00000561557 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
LINC00566-201ENST00000561557 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
LINC00566-201ENST00000561557 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
LINC00566-201ENST00000561557 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
LINC00566-201ENST00000561557 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
LINC00566-201ENST00000561557 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
LINC00566-201ENST00000561557 CDK19Q9BWU1 502 aa13.56□□□□□ -0.24
LINC00566-201ENST00000561557 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
LINC00566-201ENST00000561557 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
LINC00566-201ENST00000561557 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
LINC00566-201ENST00000561557 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
LINC00566-201ENST00000561557 TULP4Q9NRJ4 1543 aa13.54□□□□□ -0.24
LINC00566-201ENST00000561557 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
LINC00566-201ENST00000561557 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
LINC00566-201ENST00000561557 PHF8Q9UPP1 1060 aa13.54□□□□□ -0.24
LINC00566-201ENST00000561557 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
LINC00566-201ENST00000561557 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
LINC00566-201ENST00000561557 SOS2Q07890 1332 aaPredicted RBP13.53□□□□□ -0.24
LINC00566-201ENST00000561557 NHSL1Q5SYE7 1610 aa13.53□□□□□ -0.24
LINC00566-201ENST00000561557 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
LINC00566-201ENST00000561557 CCDC61Q9Y6R9 512 aa13.52□□□□□ -0.25
LINC00566-201ENST00000561557 JCADQ9P266 1359 aa13.52□□□□□ -0.25
LINC00566-201ENST00000561557 KIF1AQ12756 1690 aa13.52□□□□□ -0.25
LINC00566-201ENST00000561557 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.25
LINC00566-201ENST00000561557 FOXO3O43524 673 aa13.51□□□□□ -0.25
LINC00566-201ENST00000561557 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
LINC00566-201ENST00000561557 PSME1Q06323 249 aa13.51□□□□□ -0.25
LINC00566-201ENST00000561557 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
LINC00566-201ENST00000561557 COL16A1Q07092 1604 aaPredicted RBP13.5□□□□□ -0.25
LINC00566-201ENST00000561557 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
LINC00566-201ENST00000561557 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
LINC00566-201ENST00000561557 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
LINC00566-201ENST00000561557 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
LINC00566-201ENST00000561557 USP32Q8NFA0 1604 aa13.49□□□□□ -0.25
LINC00566-201ENST00000561557 USP47Q96K76 1375 aa13.48□□□□□ -0.25
LINC00566-201ENST00000561557 SPATA31A6Q5VVP1 1343 aa13.48□□□□□ -0.25
LINC00566-201ENST00000561557 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
LINC00566-201ENST00000561557 DDX17Q92841 729 aaKnown RBP13.48□□□□□ -0.25
LINC00566-201ENST00000561557 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
LINC00566-201ENST00000561557 ATP7BP35670 1465 aa13.48□□□□□ -0.25
LINC00566-201ENST00000561557 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
LINC00566-201ENST00000561557 NGDNQ8NEJ9 315 aaKnown RBP13.47□□□□□ -0.25
LINC00566-201ENST00000561557 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
LINC00566-201ENST00000561557 TESK2Q96S53 571 aa13.47□□□□□ -0.25
LINC00566-201ENST00000561557 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
LINC00566-201ENST00000561557 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
LINC00566-201ENST00000561557 PXDNQ92626 1479 aa13.46□□□□□ -0.25
LINC00566-201ENST00000561557 POLR3AO14802 1390 aaPredicted RBP13.45□□□□□ -0.26
LINC00566-201ENST00000561557 TMF1P82094 1093 aa13.45□□□□□ -0.26
LINC00566-201ENST00000561557 SPATA31A3Q5VYP0 1347 aa13.44□□□□□ -0.26
LINC00566-201ENST00000561557 SHPRHQ149N8 1683 aa13.44□□□□□ -0.26
LINC00566-201ENST00000561557 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00566-201ENST00000561557 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
LINC00566-201ENST00000561557 PPIP5K1Q6PFW1 1433 aa13.44□□□□□ -0.26
LINC00566-201ENST00000561557 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
LINC00566-201ENST00000561557 PNPLA6Q8IY17 1366 aa13.44□□□□□ -0.26
LINC00566-201ENST00000561557 ACEP12821 1306 aa13.43□□□□□ -0.26
LINC00566-201ENST00000561557 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
LINC00566-201ENST00000561557 TOPAZ1Q8N9V7 1692 aa13.43□□□□□ -0.26
LINC00566-201ENST00000561557 ATN1P54259 1190 aaPredicted RBP13.42□□□□□ -0.26
LINC00566-201ENST00000561557 XPCQ01831 940 aaPredicted RBP13.42□□□□□ -0.26
LINC00566-201ENST00000561557 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
LINC00566-201ENST00000561557 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
LINC00566-201ENST00000561557 NINLQ9Y2I6 1382 aa13.4□□□□□ -0.26
LINC00566-201ENST00000561557 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
LINC00566-201ENST00000561557 MNX1P50219 401 aaPredicted RBP13.39□□□□□ -0.27
LINC00566-201ENST00000561557 MED1Q15648 1581 aaPredicted RBP13.39□□□□□ -0.27
LINC00566-201ENST00000561557 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
LINC00566-201ENST00000561557 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
LINC00566-201ENST00000561557 POTEFA5A3E0 1075 aa13.37□□□□□ -0.27
LINC00566-201ENST00000561557 NUTM2BA6NNL0 878 aaPredicted RBP13.37□□□□□ -0.27
LINC00566-201ENST00000561557 NUTM2EB1AL46 878 aaPredicted RBP13.37□□□□□ -0.27
LINC00566-201ENST00000561557 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
LINC00566-201ENST00000561557 LMOD2Q6P5Q4 547 aa13.37□□□□□ -0.27
LINC00566-201ENST00000561557 HDGFL2Q7Z4V5 671 aaPredicted RBP13.37□□□□□ -0.27
LINC00566-201ENST00000561557 NUTM2AQ8IVF1 878 aaPredicted RBP13.37□□□□□ -0.27
LINC00566-201ENST00000561557 TMC1Q8TDI8 760 aa13.37□□□□□ -0.27
LINC00566-201ENST00000561557 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
LINC00566-201ENST00000561557 USP6P35125 1406 aa13.36□□□□□ -0.27
LINC00566-201ENST00000561557 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
LINC00566-201ENST00000561557 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
LINC00566-201ENST00000561557 SLC12A5Q9H2X9 1139 aa13.35□□□□□ -0.27
LINC00566-201ENST00000561557 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
LINC00566-201ENST00000561557 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
LINC00566-201ENST00000561557 SSH2Q76I76 1423 aa13.34□□□□□ -0.27
LINC00566-201ENST00000561557 NLRP13Q86W25 1043 aa13.34□□□□□ -0.27
LINC00566-201ENST00000561557 ABTB2Q8N961 1025 aa13.34□□□□□ -0.27
LINC00566-201ENST00000561557 LRP6O75581 1613 aa13.34□□□□□ -0.27
LINC00566-201ENST00000561557 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
LINC00566-201ENST00000561557 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
LINC00566-201ENST00000561557 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.28
LINC00566-201ENST00000561557 AKAP12Q02952 1782 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms