RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
RABGGTA-221ENST00000561055 USP6P35125 1406 aa13.46□□□□□ -0.26
RABGGTA-221ENST00000561055 USP54Q70EL1 1684 aa13.45□□□□□ -0.26
RABGGTA-221ENST00000561055 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-221ENST00000561055 MED1Q15648 1581 aaPredicted RBP13.45□□□□□ -0.26
RABGGTA-221ENST00000561055 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
RABGGTA-221ENST00000561055 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
RABGGTA-221ENST00000561055 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
RABGGTA-221ENST00000561055 TERF2IPQ9NYB0 399 aa13.42□□□□□ -0.26
RABGGTA-221ENST00000561055 PHRF1Q9P1Y6 1649 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-221ENST00000561055 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-221ENST00000561055 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-221ENST00000561055 ANKRD36BQ8N2N9 1353 aa13.41□□□□□ -0.26
RABGGTA-221ENST00000561055 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
RABGGTA-221ENST00000561055 LRP6O75581 1613 aa13.4□□□□□ -0.26
RABGGTA-221ENST00000561055 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-221ENST00000561055 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
RABGGTA-221ENST00000561055 KIF20BQ96Q89 1820 aa13.4□□□□□ -0.26
RABGGTA-221ENST00000561055 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
RABGGTA-221ENST00000561055 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-221ENST00000561055 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
RABGGTA-221ENST00000561055 PAK3O75914 559 aaPredicted RBP13.38□□□□□ -0.27
RABGGTA-221ENST00000561055 ABTB2Q8N961 1025 aa13.37□□□□□ -0.27
RABGGTA-221ENST00000561055 SLIT3O75094 1523 aa13.37□□□□□ -0.27
RABGGTA-221ENST00000561055 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
RABGGTA-221ENST00000561055 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
RABGGTA-221ENST00000561055 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
RABGGTA-221ENST00000561055 NLRP13Q86W25 1043 aa13.36□□□□□ -0.27
RABGGTA-221ENST00000561055 USP19O94966 1318 aa13.36□□□□□ -0.27
RABGGTA-221ENST00000561055 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-221ENST00000561055 ANKRD26Q9UPS8 1709 aa13.36□□□□□ -0.27
RABGGTA-221ENST00000561055 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
RABGGTA-221ENST00000561055 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
RABGGTA-221ENST00000561055 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
RABGGTA-221ENST00000561055 COL14A1Q05707 1796 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-221ENST00000561055 WASHC2AQ641Q2 1341 aa13.34□□□□□ -0.27
RABGGTA-221ENST00000561055 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
RABGGTA-221ENST00000561055 COL18A1P39060 1754 aa13.33□□□□□ -0.28
RABGGTA-221ENST00000561055 NUTM2BA6NNL0 878 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-221ENST00000561055 NUTM2EB1AL46 878 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-221ENST00000561055 NLRP6P59044 892 aa13.33□□□□□ -0.28
RABGGTA-221ENST00000561055 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-221ENST00000561055 CABLES1Q8TDN4 633 aa13.33□□□□□ -0.28
RABGGTA-221ENST00000561055 LTN1O94822 1766 aa13.32□□□□□ -0.28
RABGGTA-221ENST00000561055 OVOS2A0A0J9YW53 1432 aa13.32□□□□□ -0.28
RABGGTA-221ENST00000561055 OVOS2Q6IE36 1432 aa13.32□□□□□ -0.28
RABGGTA-221ENST00000561055 RGPD5Q99666 1765 aa13.32□□□□□ -0.28
RABGGTA-221ENST00000561055 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
RABGGTA-221ENST00000561055 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
RABGGTA-221ENST00000561055 CPDO75976 1380 aa13.31□□□□□ -0.28
RABGGTA-221ENST00000561055 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
RABGGTA-221ENST00000561055 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 SLIT2O94813 1529 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 NFAT5O94916 1531 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 FYB1O15117 783 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 GCP02774 474 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 NME9Q86XW9 330 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 PANK3Q9H999 370 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 NSD3Q9BZ95 1437 aa13.3□□□□□ -0.28
RABGGTA-221ENST00000561055 ADAMTS2O95450 1211 aa13.29□□□□□ -0.28
RABGGTA-221ENST00000561055 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-221ENST00000561055 KCNH5Q8NCM2 988 aa13.29□□□□□ -0.28
RABGGTA-221ENST00000561055 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
RABGGTA-221ENST00000561055 RGS17Q9UGC6 210 aaPredicted RBP13.29□□□□□ -0.28
RABGGTA-221ENST00000561055 ABCC6O95255 1503 aa13.29□□□□□ -0.28
RABGGTA-221ENST00000561055 FAM83GA6ND36 823 aa13.28□□□□□ -0.28
RABGGTA-221ENST00000561055 PER1O15534 1290 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-221ENST00000561055 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-221ENST00000561055 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-221ENST00000561055 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
RABGGTA-221ENST00000561055 NGLY1Q96IV0 654 aa13.27□□□□□ -0.29
RABGGTA-221ENST00000561055 C8orf37Q96NL8 207 aa13.27□□□□□ -0.29
RABGGTA-221ENST00000561055 AFF2P51816 1311 aa13.27□□□□□ -0.29
RABGGTA-221ENST00000561055 CGNL1Q0VF96 1302 aa13.27□□□□□ -0.29
RABGGTA-221ENST00000561055 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
RABGGTA-221ENST00000561055 NSD2O96028 1365 aa13.26□□□□□ -0.29
RABGGTA-221ENST00000561055 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-221ENST00000561055 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
RABGGTA-221ENST00000561055 COG3Q96JB2 828 aa13.26□□□□□ -0.29
RABGGTA-221ENST00000561055 AATKQ6ZMQ8 1374 aa13.25□□□□□ -0.29
RABGGTA-221ENST00000561055 ARHGEF25Q86VW2 580 aa13.25□□□□□ -0.29
RABGGTA-221ENST00000561055 CAMTA1Q9Y6Y1 1673 aa13.24□□□□□ -0.29
RABGGTA-221ENST00000561055 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-221ENST00000561055 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
RABGGTA-221ENST00000561055 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
RABGGTA-221ENST00000561055 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
RABGGTA-221ENST00000561055 UNC5CLQ8IV45 518 aa13.23□□□□□ -0.29
RABGGTA-221ENST00000561055 USP21Q9UK80 565 aa13.23□□□□□ -0.29
RABGGTA-221ENST00000561055 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
RABGGTA-221ENST00000561055 ATRNO75882 1429 aa13.22□□□□□ -0.29
RABGGTA-221ENST00000561055 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
RABGGTA-221ENST00000561055 AMER1Q5JTC6 1135 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-221ENST00000561055 FAM208AQ9UK61 1670 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-221ENST00000561055 POTEAQ6S8J7 498 aa13.21□□□□□ -0.29
RABGGTA-221ENST00000561055 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
RABGGTA-221ENST00000561055 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-221ENST00000561055 KIF24Q5T7B8 1368 aa13.2□□□□□ -0.3
RABGGTA-221ENST00000561055 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms