RNA–Protein interactions for RNA: ENST00000560999.1

CSHL1-209, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

Gene CSHL1, Length 1,602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-209ENST00000560999 RBM6P78332 1123 aaKnown RBP18.23■□□□□ 0.51
CSHL1-209ENST00000560999 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
CSHL1-209ENST00000560999 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
CSHL1-209ENST00000560999 PMFBP1Q8TBY8 1022 aa18.23■□□□□ 0.51
CSHL1-209ENST00000560999 ABCA3Q99758 1704 aa18.22■□□□□ 0.51
CSHL1-209ENST00000560999 TNS3Q68CZ2 1445 aa18.22■□□□□ 0.51
CSHL1-209ENST00000560999 FNBP4Q8N3X1 1017 aaPredicted RBP18.21■□□□□ 0.51
CSHL1-209ENST00000560999 KTN1Q86UP2 1357 aaKnown RBP18.21■□□□□ 0.51
CSHL1-209ENST00000560999 ATRNO75882 1429 aa18.21■□□□□ 0.51
CSHL1-209ENST00000560999 BCL9LQ86UU0 1499 aa18.21■□□□□ 0.51
CSHL1-209ENST00000560999 PRR36Q9H6K5 1346 aa18.2■□□□□ 0.5
CSHL1-209ENST00000560999 CABLES1Q8TDN4 633 aa18.2■□□□□ 0.5
CSHL1-209ENST00000560999 ANKARQ7Z5J8 1434 aa18.19■□□□□ 0.5
CSHL1-209ENST00000560999 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
CSHL1-209ENST00000560999 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
CSHL1-209ENST00000560999 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
CSHL1-209ENST00000560999 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
CSHL1-209ENST00000560999 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
CSHL1-209ENST00000560999 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.16■□□□□ 0.5
CSHL1-209ENST00000560999 PLCH1Q4KWH8 1693 aa18.16■□□□□ 0.5
CSHL1-209ENST00000560999 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
CSHL1-209ENST00000560999 PSME1Q06323 249 aa18.16■□□□□ 0.5
CSHL1-209ENST00000560999 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
CSHL1-209ENST00000560999 WASLO00401 505 aaPredicted RBP18.15■□□□□ 0.5
CSHL1-209ENST00000560999 SRPK2P78362 688 aaKnown RBP18.15■□□□□ 0.5
CSHL1-209ENST00000560999 GLI3P10071 1580 aa18.15■□□□□ 0.5
CSHL1-209ENST00000560999 SLIT2O94813 1529 aa18.14■□□□□ 0.5
CSHL1-209ENST00000560999 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
CSHL1-209ENST00000560999 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
CSHL1-209ENST00000560999 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
CSHL1-209ENST00000560999 SBNO1A3KN83 1393 aa18.14■□□□□ 0.49
CSHL1-209ENST00000560999 PANK3Q9H999 370 aa18.13■□□□□ 0.49
CSHL1-209ENST00000560999 ATP7BP35670 1465 aa18.13■□□□□ 0.49
CSHL1-209ENST00000560999 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
CSHL1-209ENST00000560999 ITSN1Q15811 1721 aa18.11■□□□□ 0.49
CSHL1-209ENST00000560999 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
CSHL1-209ENST00000560999 CRYBG1Q9Y4K1 1723 aa18.1■□□□□ 0.49
CSHL1-209ENST00000560999 EP400Q96L91 3159 aa18.1■□□□□ 0.49
CSHL1-209ENST00000560999 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
CSHL1-209ENST00000560999 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
CSHL1-209ENST00000560999 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
CSHL1-209ENST00000560999 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
CSHL1-209ENST00000560999 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
CSHL1-209ENST00000560999 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.48
CSHL1-209ENST00000560999 NWD2Q9ULI1 1742 aa18.08■□□□□ 0.48
CSHL1-209ENST00000560999 NRAPQ86VF7 1730 aa18.07■□□□□ 0.48
CSHL1-209ENST00000560999 NGDNQ8NEJ9 315 aaKnown RBP18.07■□□□□ 0.48
CSHL1-209ENST00000560999 BRWD3Q6RI45 1802 aa18.07■□□□□ 0.48
CSHL1-209ENST00000560999 NUDT16Q96DE0 195 aaKnown RBP18.06■□□□□ 0.48
CSHL1-209ENST00000560999 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
CSHL1-209ENST00000560999 KNSTRNQ9Y448 316 aa18.05■□□□□ 0.48
CSHL1-209ENST00000560999 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
CSHL1-209ENST00000560999 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
CSHL1-209ENST00000560999 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
CSHL1-209ENST00000560999 CD163L1Q9NR16 1453 aa18.04■□□□□ 0.48
CSHL1-209ENST00000560999 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
CSHL1-209ENST00000560999 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
CSHL1-209ENST00000560999 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
CSHL1-209ENST00000560999 CCDC9Q9Y3X0 531 aaKnown RBP18.03■□□□□ 0.48
CSHL1-209ENST00000560999 AKAP12Q02952 1782 aa18.02■□□□□ 0.48
CSHL1-209ENST00000560999 RALBP1Q15311 655 aa18.02■□□□□ 0.48
CSHL1-209ENST00000560999 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
CSHL1-209ENST00000560999 CABP1Q9NZU7 370 aa18.02■□□□□ 0.48
CSHL1-209ENST00000560999 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.47
CSHL1-209ENST00000560999 NUTM2GQ5VZR2 741 aa18.01■□□□□ 0.47
CSHL1-209ENST00000560999 A0A1W2PP64 1363 aa18.01■□□□□ 0.47
CSHL1-209ENST00000560999 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
CSHL1-209ENST00000560999 VPS72Q15906 364 aa18.01■□□□□ 0.47
CSHL1-209ENST00000560999 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
CSHL1-209ENST00000560999 HDGFL2Q7Z4V5 671 aaPredicted RBP18.01■□□□□ 0.47
CSHL1-209ENST00000560999 MON2Q7Z3U7 1717 aa18■□□□□ 0.47
CSHL1-209ENST00000560999 CPSF1Q10570 1443 aaKnown RBP18■□□□□ 0.47
CSHL1-209ENST00000560999 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
CSHL1-209ENST00000560999 BTG4Q9NY30 223 aa18■□□□□ 0.47
CSHL1-209ENST00000560999 PARD3Q8TEW0 1356 aa17.99■□□□□ 0.47
CSHL1-209ENST00000560999 ACEP12821 1306 aa17.99■□□□□ 0.47
CSHL1-209ENST00000560999 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
CSHL1-209ENST00000560999 MRS2Q9HD23 443 aa17.99■□□□□ 0.47
CSHL1-209ENST00000560999 SEPT12Q8IYM1 358 aa17.98■□□□□ 0.47
CSHL1-209ENST00000560999 POLR3AO14802 1390 aaPredicted RBP17.98■□□□□ 0.47
CSHL1-209ENST00000560999 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
CSHL1-209ENST00000560999 CHRNA2Q15822 529 aa17.96■□□□□ 0.47
CSHL1-209ENST00000560999 ZNF692Q9BU19 519 aaPredicted RBP17.96■□□□□ 0.47
CSHL1-209ENST00000560999 NRKQ7Z2Y5 1582 aa17.96■□□□□ 0.47
CSHL1-209ENST00000560999 NSD2O96028 1365 aa17.96■□□□□ 0.47
CSHL1-209ENST00000560999 KIAA0232Q92628 1395 aa17.96■□□□□ 0.47
CSHL1-209ENST00000560999 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 A0A0G2JS52 829 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 MYT1Q01538 1121 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 PRDM11Q9NQV5 511 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 INSRP06213 1382 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
CSHL1-209ENST00000560999 HNRNPUQ00839 825 aaKnown RBP eCLIP17.94■□□□□ 0.46
CSHL1-209ENST00000560999 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
CSHL1-209ENST00000560999 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
CSHL1-209ENST00000560999 EDC4Q6P2E9 1401 aaKnown RBP17.94■□□□□ 0.46
CSHL1-209ENST00000560999 ZC3H6P61129 1189 aaKnown RBP17.94■□□□□ 0.46
CSHL1-209ENST00000560999 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms