RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
TRPM1-212ENST00000560801 TCP11L2Q8N4U5 519 aa12.24□□□□□ -0.45
TRPM1-212ENST00000560801 TTC21BQ7Z4L5 1316 aa12.24□□□□□ -0.45
TRPM1-212ENST00000560801 PLEKHG1Q9ULL1 1385 aa12.24□□□□□ -0.45
TRPM1-212ENST00000560801 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
TRPM1-212ENST00000560801 IFNL2Q8IZJ0 200 aa12.23□□□□□ -0.45
TRPM1-212ENST00000560801 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
TRPM1-212ENST00000560801 EFCAB6Q5THR3 1501 aa12.23□□□□□ -0.45
TRPM1-212ENST00000560801 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
TRPM1-212ENST00000560801 PNISRQ8TF01 805 aaKnown RBP12.23□□□□□ -0.45
TRPM1-212ENST00000560801 AFF2P51816 1311 aa12.23□□□□□ -0.45
TRPM1-212ENST00000560801 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
TRPM1-212ENST00000560801 DIP2BQ9P265 1576 aa12.22□□□□□ -0.45
TRPM1-212ENST00000560801 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
TRPM1-212ENST00000560801 ABCC1P33527 1531 aa12.22□□□□□ -0.45
TRPM1-212ENST00000560801 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
TRPM1-212ENST00000560801 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
TRPM1-212ENST00000560801 SAMD9LQ8IVG5 1584 aa12.22□□□□□ -0.45
TRPM1-212ENST00000560801 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
TRPM1-212ENST00000560801 MYBBP1AQ9BQG0 1328 aaKnown RBP12.22□□□□□ -0.45
TRPM1-212ENST00000560801 KAT6BQ8WYB5 2073 aa12.22□□□□□ -0.45
TRPM1-212ENST00000560801 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.45
TRPM1-212ENST00000560801 TRPM2O94759 1503 aa12.21□□□□□ -0.45
TRPM1-212ENST00000560801 APBB1O00213 710 aa12.21□□□□□ -0.45
TRPM1-212ENST00000560801 NOL10Q9BSC4 688 aaKnown RBP12.21□□□□□ -0.45
TRPM1-212ENST00000560801 FKBP5Q13451 457 aaPredicted RBP12.21□□□□□ -0.46
TRPM1-212ENST00000560801 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.46
TRPM1-212ENST00000560801 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.46
TRPM1-212ENST00000560801 UPF2Q9HAU5 1272 aaKnown RBP12.21□□□□□ -0.46
TRPM1-212ENST00000560801 CFAP65Q6ZU64 1925 aaKnown RBP12.2□□□□□ -0.46
TRPM1-212ENST00000560801 TRIM34Q9BYJ4 488 aa12.2□□□□□ -0.46
TRPM1-212ENST00000560801 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
TRPM1-212ENST00000560801 JCADQ9P266 1359 aa12.2□□□□□ -0.46
TRPM1-212ENST00000560801 GNAI1P63096 354 aa12.2□□□□□ -0.46
TRPM1-212ENST00000560801 GPR162Q16538 588 aa12.19□□□□□ -0.46
TRPM1-212ENST00000560801 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
TRPM1-212ENST00000560801 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
TRPM1-212ENST00000560801 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
TRPM1-212ENST00000560801 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
TRPM1-212ENST00000560801 FAM196AQ6ZSG2 479 aa12.18□□□□□ -0.46
TRPM1-212ENST00000560801 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
TRPM1-212ENST00000560801 ERVK-7P63135 1459 aa12.18□□□□□ -0.46
TRPM1-212ENST00000560801 MBD5Q9P267 1494 aa12.18□□□□□ -0.46
TRPM1-212ENST00000560801 APAF1O14727 1248 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 HSP90AA1P07900 732 aaKnown RBP12.17□□□□□ -0.46
TRPM1-212ENST00000560801 CWC22Q9HCG8 908 aaKnown RBP12.17□□□□□ -0.46
TRPM1-212ENST00000560801 PZPP20742 1482 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 ATP6V1AP38606 617 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 CCDC136Q96JN2 1154 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
TRPM1-212ENST00000560801 KIF7Q2M1P5 1343 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 NSD3Q9BZ95 1437 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
TRPM1-212ENST00000560801 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 MIER1Q8N108 512 aa12.17□□□□□ -0.46
TRPM1-212ENST00000560801 PIK3R4Q99570 1358 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 UNC5CLQ8IV45 518 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 ZNF622Q969S3 477 aaKnown RBP eCLIP12.16□□□□□ -0.46
TRPM1-212ENST00000560801 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 FGD1P98174 961 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 GLI2P10070 1586 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 GNAT3A8MTJ3 354 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 MYL6BP14649 208 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 CASC1Q6TDU7 716 aa12.16□□□□□ -0.46
TRPM1-212ENST00000560801 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-212ENST00000560801 COL17A1Q9UMD9 1497 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-212ENST00000560801 HMMRO75330 724 aa12.15□□□□□ -0.46
TRPM1-212ENST00000560801 TEX13AQ9BXU3 409 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-212ENST00000560801 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.47
TRPM1-212ENST00000560801 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
TRPM1-212ENST00000560801 PARP3Q9Y6F1 533 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 TRIM37O94972 964 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 DDRGK1Q96HY6 314 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 SPATA31A6Q5VVP1 1343 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
TRPM1-212ENST00000560801 A0A087WZG4 1122 aa12.13□□□□□ -0.47
TRPM1-212ENST00000560801 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
TRPM1-212ENST00000560801 PLIN1O60240 522 aa12.13□□□□□ -0.47
TRPM1-212ENST00000560801 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
TRPM1-212ENST00000560801 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
TRPM1-212ENST00000560801 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
TRPM1-212ENST00000560801 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
TRPM1-212ENST00000560801 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
TRPM1-212ENST00000560801 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
TRPM1-212ENST00000560801 HSP90AB2PQ58FF8 381 aa12.11□□□□□ -0.47
TRPM1-212ENST00000560801 METP08581 1390 aa12.11□□□□□ -0.47
TRPM1-212ENST00000560801 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
TRPM1-212ENST00000560801 ARHGEF5Q12774 1597 aa12.11□□□□□ -0.47
TRPM1-212ENST00000560801 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-212ENST00000560801 CTDP1Q9Y5B0 961 aaPredicted RBP12.1□□□□□ -0.47
TRPM1-212ENST00000560801 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
TRPM1-212ENST00000560801 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
TRPM1-212ENST00000560801 ST5P78524 1137 aa12.1□□□□□ -0.47
TRPM1-212ENST00000560801 AMOTL1Q8IY63 956 aa12.1□□□□□ -0.47
TRPM1-212ENST00000560801 CCDC7Q96M83 1385 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms