RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	SIN3A	Q96ST3	1273 aa		11.18	□□□□□ -0.62
MARK3-222	ENST00000560731	DENND4B	O75064	1496 aa	Predicted RBP	11.18	□□□□□ -0.62
MARK3-222	ENST00000560731	FAM98C	Q17RN3	349 aa	Known RBP	11.17	□□□□□ -0.62
MARK3-222	ENST00000560731	ADGRL1	O94910	1474 aa		11.17	□□□□□ -0.62
MARK3-222	ENST00000560731	NEO1	Q92859	1461 aa		11.17	□□□□□ -0.62
MARK3-222	ENST00000560731	PRSS12	P56730	875 aa		11.16	□□□□□ -0.62
MARK3-222	ENST00000560731	FAM69C	Q0P6D2	419 aa		11.16	□□□□□ -0.62
MARK3-222	ENST00000560731	ZFR	Q96KR1	1074 aa	Known RBP	11.16	□□□□□ -0.62
MARK3-222	ENST00000560731	PLXNC1	O60486	1568 aa		11.16	□□□□□ -0.62
MARK3-222	ENST00000560731	PZP	P20742	1482 aa		11.15	□□□□□ -0.62
MARK3-222	ENST00000560731	PRIM1	P49642	420 aa	Known RBP	11.15	□□□□□ -0.62
MARK3-222	ENST00000560731	BRPF1	P55201	1214 aa	Predicted RBP	11.15	□□□□□ -0.62
MARK3-222	ENST00000560731	CDCA7L	Q96GN5	454 aa		11.15	□□□□□ -0.62
MARK3-222	ENST00000560731	DUOX2	Q9NRD8	1548 aa		11.14	□□□□□ -0.63
MARK3-222	ENST00000560731	NEUROD1	Q13562	356 aa		11.14	□□□□□ -0.63
MARK3-222	ENST00000560731	TSKS	Q9UJT2	592 aa		11.14	□□□□□ -0.63
MARK3-222	ENST00000560731	CFAP74	Q9C0B2	1584 aa		11.14	□□□□□ -0.63
MARK3-222	ENST00000560731	NUP155	O75694	1391 aa		11.14	□□□□□ -0.63
MARK3-222	ENST00000560731	ANKRD30B	Q9BXX2	1392 aa		11.14	□□□□□ -0.63
MARK3-222	ENST00000560731	MAP3K4	Q9Y6R4	1608 aa		11.13	□□□□□ -0.63
MARK3-222	ENST00000560731	SOWAHB	A6NEL2	793 aa		11.13	□□□□□ -0.63
MARK3-222	ENST00000560731	RBM27	Q9P2N5	1060 aa	Known RBP	11.13	□□□□□ -0.63
MARK3-222	ENST00000560731	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.13	□□□□□ -0.63
MARK3-222	ENST00000560731	ERBIN	Q96RT1	1412 aa		11.12	□□□□□ -0.63
MARK3-222	ENST00000560731	GPR37	O15354	613 aa		11.12	□□□□□ -0.63
MARK3-222	ENST00000560731	NYAP1	Q6ZVC0	841 aa		11.12	□□□□□ -0.63
MARK3-222	ENST00000560731	KDM5D	Q9BY66	1539 aa		11.12	□□□□□ -0.63
MARK3-222	ENST00000560731	ZNF518A	Q6AHZ1	1483 aa		11.12	□□□□□ -0.63
MARK3-222	ENST00000560731	PPP1R15A	O75807	674 aa	Predicted RBP	11.11	□□□□□ -0.63
MARK3-222	ENST00000560731	TMEM132A	Q24JP5	1023 aa		11.11	□□□□□ -0.63
MARK3-222	ENST00000560731	DHX29	Q7Z478	1369 aa	Known RBP	11.11	□□□□□ -0.63
MARK3-222	ENST00000560731	MLH3	Q9UHC1	1453 aa		11.11	□□□□□ -0.63
MARK3-222	ENST00000560731	DIP2B	Q9P265	1576 aa		11.11	□□□□□ -0.63
MARK3-222	ENST00000560731	POGZ	Q7Z3K3	1410 aa		11.1	□□□□□ -0.63
MARK3-222	ENST00000560731	ZFYVE16	Q7Z3T8	1539 aa		11.1	□□□□□ -0.63
MARK3-222	ENST00000560731	IFFO2	Q5TF58	517 aa		11.1	□□□□□ -0.63
MARK3-222	ENST00000560731	ATP7A	Q04656	1500 aa		11.09	□□□□□ -0.63
MARK3-222	ENST00000560731	INO80	Q9ULG1	1556 aa	Predicted RBP	11.09	□□□□□ -0.63
MARK3-222	ENST00000560731	NBPF26	B4DH59	902 aa		11.09	□□□□□ -0.63
MARK3-222	ENST00000560731	KDM5C	P41229	1560 aa		11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	RAPGEF3	O95398	923 aa		11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	BCAM	P50895	628 aa		11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	NEUROD2	Q15784	382 aa		11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	LRCH3	Q96II8	777 aa		11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	AK7	Q96M32	723 aa		11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.08	□□□□□ -0.64
MARK3-222	ENST00000560731	KRI1	Q8N9T8	703 aa	Known RBP	11.07	□□□□□ -0.64
MARK3-222	ENST00000560731	CDHR5	Q9HBB8	845 aa		11.07	□□□□□ -0.64
MARK3-222	ENST00000560731	UNC13B	O14795	1591 aa		11.07	□□□□□ -0.64
MARK3-222	ENST00000560731	MAGI2	Q86UL8	1455 aa		11.06	□□□□□ -0.64
MARK3-222	ENST00000560731	KIDINS220	Q9ULH0	1771 aa		11.06	□□□□□ -0.64
MARK3-222	ENST00000560731	NUTM2F	A1L443	756 aa		11.06	□□□□□ -0.64
MARK3-222	ENST00000560731	TATDN2	Q93075	761 aa		11.06	□□□□□ -0.64
MARK3-222	ENST00000560731	TEX14	Q8IWB6	1497 aa		11.06	□□□□□ -0.64
MARK3-222	ENST00000560731	TONSL	Q96HA7	1378 aa		11.05	□□□□□ -0.64
MARK3-222	ENST00000560731	FAM135A	Q9P2D6	1515 aa		11.05	□□□□□ -0.64
MARK3-222	ENST00000560731	FAM198A	Q9UFP1	575 aa		11.05	□□□□□ -0.64
MARK3-222	ENST00000560731	TSR3	Q9UJK0	312 aa	Known RBP	11.05	□□□□□ -0.64
MARK3-222	ENST00000560731	RPRD2	Q5VT52	1461 aa	Known RBP	11.05	□□□□□ -0.64
MARK3-222	ENST00000560731	KIF3B	O15066	747 aa		11.04	□□□□□ -0.64
MARK3-222	ENST00000560731	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.04	□□□□□ -0.64
MARK3-222	ENST00000560731	PNMA3	Q9UL41	463 aa		11.04	□□□□□ -0.64
MARK3-222	ENST00000560731	A2M	P01023	1474 aa		11.04	□□□□□ -0.64
MARK3-222	ENST00000560731	TTC13	Q8NBP0	860 aa		11.03	□□□□□ -0.64
MARK3-222	ENST00000560731	L3MBTL2	Q969R5	705 aa		11.03	□□□□□ -0.64
MARK3-222	ENST00000560731	IQGAP3	Q86VI3	1631 aa		11.02	□□□□□ -0.64
MARK3-222	ENST00000560731	PPRC1	Q5VV67	1664 aa	Known RBP	11.02	□□□□□ -0.64
MARK3-222	ENST00000560731	HDGF	P51858	240 aa	Known RBP	11.02	□□□□□ -0.65
MARK3-222	ENST00000560731	WBP1L	Q9NX94	342 aa		11.02	□□□□□ -0.65
MARK3-222	ENST00000560731	RICTOR	Q6R327	1708 aa		11.01	□□□□□ -0.65
MARK3-222	ENST00000560731	HPS5	Q9UPZ3	1129 aa		11.01	□□□□□ -0.65
MARK3-222	ENST00000560731	VWDE	Q8N2E2	1590 aa		11.01	□□□□□ -0.65
MARK3-222	ENST00000560731	HECW2	Q9P2P5	1572 aa		11.01	□□□□□ -0.65
MARK3-222	ENST00000560731	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.01	□□□□□ -0.65
MARK3-222	ENST00000560731	KANK1	Q14678	1352 aa		11.01	□□□□□ -0.65
MARK3-222	ENST00000560731	ATP10A	O60312	1499 aa		11	□□□□□ -0.65
MARK3-222	ENST00000560731	KIF13A	Q9H1H9	1805 aa		11	□□□□□ -0.65
MARK3-222	ENST00000560731	DEPDC5	O75140	1603 aa		11	□□□□□ -0.65
MARK3-222	ENST00000560731	SMAP	O00193	183 aa		11	□□□□□ -0.65
MARK3-222	ENST00000560731	NUDT18	Q6ZVK8	323 aa		11	□□□□□ -0.65
MARK3-222	ENST00000560731	PLA2R1	Q13018	1463 aa		11	□□□□□ -0.65
MARK3-222	ENST00000560731	GNPAT	O15228	680 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	FCHSD2	O94868	740 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	ITGBL1	O95965	494 aa	Predicted RBP	10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	HIC1	Q14526	733 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	PADI6	Q6TGC4	694 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	SAMD7	Q7Z3H4	446 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	ZMYM4	Q5VZL5	1548 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	FRMPD1	Q5SYB0	1578 aa		10.99	□□□□□ -0.65
MARK3-222	ENST00000560731	TRIM66	O15016	1216 aa		10.98	□□□□□ -0.65
MARK3-222	ENST00000560731	PPP4C	P60510	307 aa		10.98	□□□□□ -0.65
MARK3-222	ENST00000560731	MAP2K5	Q13163	448 aa		10.98	□□□□□ -0.65
MARK3-222	ENST00000560731	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.98	□□□□□ -0.65
MARK3-222	ENST00000560731	C3orf80	F5H4A9	247 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	PTGDR	Q13258	359 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	NECTIN2	Q92692	538 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	GTF3C3	Q9Y5Q9	886 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	PTPRT	O14522	1441 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	YEATS2	Q9ULM3	1422 aa		10.97	□□□□□ -0.65
MARK3-222	ENST00000560731	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms