RNA–Protein interactions for RNA: ENST00000560471.5

SHF-206, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-206ENST00000560471 ZKSCAN2Q63HK3 967 aa33.33■■■□□ 2.93
SHF-206ENST00000560471 EXOSC9Q06265 439 aaKnown RBP33.32■■■□□ 2.92
SHF-206ENST00000560471 CLTCQ00610 1675 aaKnown RBP33.3■■■□□ 2.92
SHF-206ENST00000560471 ANKRD26Q9UPS8 1709 aa33.3■■■□□ 2.92
SHF-206ENST00000560471 RWDD1Q9H446 243 aaPredicted RBP33.29■■■□□ 2.92
SHF-206ENST00000560471 FTSJ3Q8IY81 847 aaKnown RBP33.28■■■□□ 2.92
SHF-206ENST00000560471 DZIP1LQ8IYY4 767 aaKnown RBP33.28■■■□□ 2.92
SHF-206ENST00000560471 SMC4Q9NTJ3 1288 aa33.28■■■□□ 2.92
SHF-206ENST00000560471 MED14O60244 1454 aa33.27■■■□□ 2.92
SHF-206ENST00000560471 CDK19Q9BWU1 502 aa33.27■■■□□ 2.92
SHF-206ENST00000560471 ALKQ9UM73 1620 aa33.27■■■□□ 2.92
SHF-206ENST00000560471 CT47B1P0C2W7 299 aaPredicted RBP33.26■■■□□ 2.92
SHF-206ENST00000560471 HDGFL2Q7Z4V5 671 aaPredicted RBP33.24■■■□□ 2.91
SHF-206ENST00000560471 CABP1Q9NZU7 370 aa33.24■■■□□ 2.91
SHF-206ENST00000560471 SSH1Q8WYL5 1049 aa33.24■■■□□ 2.91
SHF-206ENST00000560471 DIAPH1O60610 1272 aaKnown RBP33.23■■■□□ 2.91
SHF-206ENST00000560471 TRIM27P14373 513 aa33.22■■■□□ 2.91
SHF-206ENST00000560471 RIPK4P57078 832 aa33.22■■■□□ 2.91
SHF-206ENST00000560471 ARHGEF40Q8TER5 1519 aa33.22■■■□□ 2.91
SHF-206ENST00000560471 STAG3Q9UJ98 1225 aa33.21■■■□□ 2.91
SHF-206ENST00000560471 FRAT2O75474 233 aaPredicted RBP33.2■■■□□ 2.9
SHF-206ENST00000560471 GSE1Q14687 1217 aa33.2■■■□□ 2.9
SHF-206ENST00000560471 ZMYM3Q14202 1370 aa33.18■■■□□ 2.9
SHF-206ENST00000560471 PNPLA6Q8IY17 1366 aa33.18■■■□□ 2.9
SHF-206ENST00000560471 IL16Q14005 1332 aa33.18■■■□□ 2.9
SHF-206ENST00000560471 KIF20BQ96Q89 1820 aa33.16■■■□□ 2.9
SHF-206ENST00000560471 FBLN1P23142 703 aa33.16■■■□□ 2.9
SHF-206ENST00000560471 NOB1Q9ULX3 412 aaKnown RBP33.16■■■□□ 2.9
SHF-206ENST00000560471 ITPRIPQ8IWB1 547 aa33.16■■■□□ 2.9
SHF-206ENST00000560471 ATF7IPQ6VMQ6 1270 aa33.15■■■□□ 2.9
SHF-206ENST00000560471 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.15■■■□□ 2.9
SHF-206ENST00000560471 WAPLQ7Z5K2 1190 aa33.14■■■□□ 2.9
SHF-206ENST00000560471 DDX19BQ9UMR2 479 aa33.11■■■□□ 2.89
SHF-206ENST00000560471 IL27Q8NEV9 243 aa33.11■■■□□ 2.89
SHF-206ENST00000560471 TBC1D32Q96NH3 1257 aa33.11■■■□□ 2.89
SHF-206ENST00000560471 BECN1Q14457 450 aa33.1■■■□□ 2.89
SHF-206ENST00000560471 LRRC7Q96NW7 1537 aa33.1■■■□□ 2.89
SHF-206ENST00000560471 UPF2Q9HAU5 1272 aaKnown RBP33.1■■■□□ 2.89
SHF-206ENST00000560471 PNNQ9H307 717 aaKnown RBP33.09■■■□□ 2.89
SHF-206ENST00000560471 CYB5RLQ6IPT4 315 aa33.09■■■□□ 2.89
SHF-206ENST00000560471 TMEM57Q8N5G2 664 aa33.09■■■□□ 2.89
SHF-206ENST00000560471 POLKQ9UBT6 870 aa33.08■■■□□ 2.89
SHF-206ENST00000560471 FCHSD2O94868 740 aa33.08■■■□□ 2.89
SHF-206ENST00000560471 HDAC1Q13547 482 aaPredicted RBP33.08■■■□□ 2.89
SHF-206ENST00000560471 PRKAR2BP31323 418 aa33.07■■■□□ 2.88
SHF-206ENST00000560471 RSPH6AQ9H0K4 717 aa33.06■■■□□ 2.88
SHF-206ENST00000560471 CDC42BPGQ6DT37 1551 aa33.06■■■□□ 2.88
SHF-206ENST00000560471 A2ML1A8K2U0 1454 aa33.05■■■□□ 2.88
SHF-206ENST00000560471 FAM69CQ0P6D2 419 aa33.04■■■□□ 2.88
SHF-206ENST00000560471 SLKQ9H2G2 1235 aaPredicted RBP33.04■■■□□ 2.88
SHF-206ENST00000560471 FAM135BQ49AJ0 1406 aa33.03■■■□□ 2.88
SHF-206ENST00000560471 DLC1Q96QB1 1528 aa33.03■■■□□ 2.88
SHF-206ENST00000560471 KIF16BQ96L93 1317 aa33.02■■■□□ 2.88
SHF-206ENST00000560471 ATP7BP35670 1465 aa33.02■■■□□ 2.88
SHF-206ENST00000560471 ZBTB40Q9NUA8 1239 aa33.02■■■□□ 2.88
SHF-206ENST00000560471 RIMS2Q9UQ26 1411 aa33.02■■■□□ 2.88
SHF-206ENST00000560471 HMOX1P09601 288 aa33.01■■■□□ 2.87
SHF-206ENST00000560471 PHACTR3Q96KR7 559 aa33■■■□□ 2.87
SHF-206ENST00000560471 SETD1AO15047 1707 aaKnown RBP32.99■■■□□ 2.87
SHF-206ENST00000560471 IPO8O15397 1037 aaKnown RBP32.99■■■□□ 2.87
SHF-206ENST00000560471 SMC5Q8IY18 1101 aa32.99■■■□□ 2.87
SHF-206ENST00000560471 TBC1D2Q9BYX2 928 aa32.99■■■□□ 2.87
SHF-206ENST00000560471 RIMBP3CA6NJZ7 1639 aa32.98■■■□□ 2.87
SHF-206ENST00000560471 RIMBP3BA6NNM3 1639 aa32.98■■■□□ 2.87
SHF-206ENST00000560471 RIMBP3Q9UFD9 1639 aa32.98■■■□□ 2.87
SHF-206ENST00000560471 ALDH1L2Q3SY69 923 aa32.97■■■□□ 2.87
SHF-206ENST00000560471 THUMPD2Q9BTF0 503 aaKnown RBP32.97■■■□□ 2.87
SHF-206ENST00000560471 EMILIN1Q9Y6C2 1016 aa32.97■■■□□ 2.87
SHF-206ENST00000560471 MAP2P11137 1827 aaKnown RBP32.97■■■□□ 2.87
SHF-206ENST00000560471 TSPOAP1O95153 1857 aa32.96■■■□□ 2.87
SHF-206ENST00000560471 MLECQ14165 292 aa32.95■■■□□ 2.87
SHF-206ENST00000560471 ANTXR1Q9H6X2 564 aa32.95■■■□□ 2.87
SHF-206ENST00000560471 SPATA31D1Q6ZQQ2 1576 aa32.95■■■□□ 2.86
SHF-206ENST00000560471 NME9Q86XW9 330 aa32.94■■■□□ 2.86
SHF-206ENST00000560471 ZRANB1Q9UGI0 708 aa32.94■■■□□ 2.86
SHF-206ENST00000560471 AGLP35573 1532 aa32.94■■■□□ 2.86
SHF-206ENST00000560471 NFE2L2Q16236 605 aa32.94■■■□□ 2.86
SHF-206ENST00000560471 BRPF3Q9ULD4 1205 aa32.93■■■□□ 2.86
SHF-206ENST00000560471 REREQ9P2R6 1566 aa32.92■■■□□ 2.86
SHF-206ENST00000560471 MFAP1P55081 439 aaKnown RBP32.92■■■□□ 2.86
SHF-206ENST00000560471 DIP2BQ9P265 1576 aa32.92■■■□□ 2.86
SHF-206ENST00000560471 PPIP5K1Q6PFW1 1433 aa32.92■■■□□ 2.86
SHF-206ENST00000560471 PPP6R1Q9UPN7 881 aa32.92■■■□□ 2.86
SHF-206ENST00000560471 CPSF1Q10570 1443 aaKnown RBP32.91■■■□□ 2.86
SHF-206ENST00000560471 WASLO00401 505 aaPredicted RBP32.91■■■□□ 2.86
SHF-206ENST00000560471 RTN4Q9NQC3 1192 aaKnown RBP32.9■■■□□ 2.86
SHF-206ENST00000560471 IL13P35225 146 aa32.9■■■□□ 2.86
SHF-206ENST00000560471 C22orf23Q9BZE7 217 aa32.89■■■□□ 2.86
SHF-206ENST00000560471 EDC4Q6P2E9 1401 aaKnown RBP32.89■■■□□ 2.86
SHF-206ENST00000560471 METP08581 1390 aa32.89■■■□□ 2.86
SHF-206ENST00000560471 TSPYL6Q8N831 410 aa32.88■■■□□ 2.85
SHF-206ENST00000560471 NCKAP5LQ9HCH0 1330 aa32.88■■■□□ 2.85
SHF-206ENST00000560471 NRXN3Q9Y4C0 1643 aa32.88■■■□□ 2.85
SHF-206ENST00000560471 VAMP4O75379 141 aa32.87■■■□□ 2.85
SHF-206ENST00000560471 TXNDC2Q86VQ3 553 aa32.87■■■□□ 2.85
SHF-206ENST00000560471 BRPF1P55201 1214 aaPredicted RBP32.86■■■□□ 2.85
SHF-206ENST00000560471 NUCB1Q02818 461 aa32.86■■■□□ 2.85
SHF-206ENST00000560471 ZNF428Q96B54 188 aa32.85■■■□□ 2.85
SHF-206ENST00000560471 MRPL50Q8N5N7 158 aaKnown RBP32.85■■■□□ 2.85
SHF-206ENST00000560471 LNPKQ9C0E8 428 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms