RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 DUOX2Q9NRD8 1548 aa10.52□□□□□ -0.73
HERC1-208ENST00000560462 MYO5BQ9ULV0 1848 aa10.51□□□□□ -0.73
HERC1-208ENST00000560462 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
HERC1-208ENST00000560462 ZNF526Q8TF50 670 aaPredicted RBP10.51□□□□□ -0.73
HERC1-208ENST00000560462 GCC2Q8IWJ2 1684 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
HERC1-208ENST00000560462 KLRG1Q96E93 195 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 THSD7AQ9UPZ6 1657 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 LRPPRCP42704 1394 aaKnown RBP10.5□□□□□ -0.73
HERC1-208ENST00000560462 TNS2Q63HR2 1409 aa10.5□□□□□ -0.73
HERC1-208ENST00000560462 CHGAP10645 457 aaKnown RBP10.49□□□□□ -0.73
HERC1-208ENST00000560462 FAM161AQ3B820 660 aa10.49□□□□□ -0.73
HERC1-208ENST00000560462 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
HERC1-208ENST00000560462 SPATA31A5Q5VU36 1347 aa10.48□□□□□ -0.73
HERC1-208ENST00000560462 SPATA31A7Q8IWB4 1347 aa10.48□□□□□ -0.73
HERC1-208ENST00000560462 METP08581 1390 aa10.48□□□□□ -0.73
HERC1-208ENST00000560462 CROCC2H7BZ55 1655 aa10.47□□□□□ -0.73
HERC1-208ENST00000560462 GRIN3BO60391 1043 aa10.47□□□□□ -0.73
HERC1-208ENST00000560462 IFNLR1Q8IU57 520 aaPredicted RBP10.47□□□□□ -0.73
HERC1-208ENST00000560462 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
HERC1-208ENST00000560462 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
HERC1-208ENST00000560462 ERBINQ96RT1 1412 aa10.47□□□□□ -0.73
HERC1-208ENST00000560462 PLEKHG5O94827 1062 aa10.46□□□□□ -0.73
HERC1-208ENST00000560462 BCL11BQ9C0K0 894 aaPredicted RBP10.46□□□□□ -0.73
HERC1-208ENST00000560462 NRAPQ86VF7 1730 aa10.45□□□□□ -0.74
HERC1-208ENST00000560462 CEP162Q5TB80 1403 aa10.45□□□□□ -0.74
HERC1-208ENST00000560462 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
HERC1-208ENST00000560462 KIF3CO14782 793 aa10.44□□□□□ -0.74
HERC1-208ENST00000560462 ADCY9O60503 1353 aa10.43□□□□□ -0.74
HERC1-208ENST00000560462 KIF15Q9NS87 1388 aa10.43□□□□□ -0.74
HERC1-208ENST00000560462 PDE3BQ13370 1112 aa10.43□□□□□ -0.74
HERC1-208ENST00000560462 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
HERC1-208ENST00000560462 STK32BQ9NY57 414 aa10.42□□□□□ -0.74
HERC1-208ENST00000560462 NRXN3Q9Y4C0 1643 aa10.42□□□□□ -0.74
HERC1-208ENST00000560462 CCDC144AA2RUR9 1427 aa10.41□□□□□ -0.74
HERC1-208ENST00000560462 WDR90Q96KV7 1748 aa10.41□□□□□ -0.74
HERC1-208ENST00000560462 PLSCR1O15162 318 aa10.41□□□□□ -0.74
HERC1-208ENST00000560462 YBX3P16989 372 aaKnown RBP eCLIP10.41□□□□□ -0.74
HERC1-208ENST00000560462 HTRA3P83110 453 aa10.41□□□□□ -0.74
HERC1-208ENST00000560462 RGPD3A6NKT7 1758 aaPredicted RBP10.4□□□□□ -0.74
HERC1-208ENST00000560462 RGPD4Q7Z3J3 1758 aa10.4□□□□□ -0.74
HERC1-208ENST00000560462 TOMM70O94826 608 aa10.4□□□□□ -0.74
HERC1-208ENST00000560462 HSPA1AP0DMV8 641 aaKnown RBP10.4□□□□□ -0.74
HERC1-208ENST00000560462 HSPA1BP0DMV9 641 aaKnown RBP10.4□□□□□ -0.74
HERC1-208ENST00000560462 TNS3Q68CZ2 1445 aa10.4□□□□□ -0.75
HERC1-208ENST00000560462 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.75
HERC1-208ENST00000560462 SLC15A2Q16348 729 aa10.39□□□□□ -0.75
HERC1-208ENST00000560462 KRT28Q7Z3Y7 464 aa10.39□□□□□ -0.75
HERC1-208ENST00000560462 RRP7BPQ9NSQ0 103 aa10.39□□□□□ -0.75
HERC1-208ENST00000560462 SPATA31A1Q5TZJ5 1347 aa10.38□□□□□ -0.75
HERC1-208ENST00000560462 ROBO2Q9HCK4 1378 aa10.38□□□□□ -0.75
HERC1-208ENST00000560462 MLLT1Q03111 559 aaPredicted RBP10.37□□□□□ -0.75
HERC1-208ENST00000560462 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
HERC1-208ENST00000560462 NLGN2Q8NFZ4 835 aa10.37□□□□□ -0.75
HERC1-208ENST00000560462 ABCA3Q99758 1704 aa10.37□□□□□ -0.75
HERC1-208ENST00000560462 COL14A1Q05707 1796 aaKnown RBP10.36□□□□□ -0.75
HERC1-208ENST00000560462 ARHGEF10O15013 1369 aa10.36□□□□□ -0.75
HERC1-208ENST00000560462 CDC42BPGQ6DT37 1551 aa10.35□□□□□ -0.75
HERC1-208ENST00000560462 C11orf95C9JLR9 678 aaPredicted RBP10.35□□□□□ -0.75
HERC1-208ENST00000560462 PSME1Q06323 249 aa10.35□□□□□ -0.75
HERC1-208ENST00000560462 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
HERC1-208ENST00000560462 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
HERC1-208ENST00000560462 POLD1P28340 1107 aa10.32□□□□□ -0.76
HERC1-208ENST00000560462 USP35Q9P2H5 1018 aa10.32□□□□□ -0.76
HERC1-208ENST00000560462 TECPR2O15040 1411 aa10.32□□□□□ -0.76
HERC1-208ENST00000560462 USP19O94966 1318 aa10.32□□□□□ -0.76
HERC1-208ENST00000560462 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
HERC1-208ENST00000560462 BARGINQ6ZT62 677 aa10.31□□□□□ -0.76
HERC1-208ENST00000560462 TAOK2Q9UL54 1235 aa10.31□□□□□ -0.76
HERC1-208ENST00000560462 KIF1AQ12756 1690 aa10.31□□□□□ -0.76
HERC1-208ENST00000560462 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
HERC1-208ENST00000560462 BBXQ8WY36 941 aaPredicted RBP10.3□□□□□ -0.76
HERC1-208ENST00000560462 STRN4Q9NRL3 753 aa10.3□□□□□ -0.76
HERC1-208ENST00000560462 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
HERC1-208ENST00000560462 IQGAP3Q86VI3 1631 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 TXNRD1Q16881 649 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
HERC1-208ENST00000560462 PRDM11Q9NQV5 511 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 OVOS2A0A0G2JMS6 1433 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 OVOS2A0A0J9YW53 1432 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 OVOS2Q6IE36 1432 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 PRAG1Q86YV5 1406 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 KIAA1210Q9ULL0 1709 aa10.29□□□□□ -0.76
HERC1-208ENST00000560462 MYOM3Q5VTT5 1437 aa10.28□□□□□ -0.76
HERC1-208ENST00000560462 POLA2Q14181 598 aa10.28□□□□□ -0.76
HERC1-208ENST00000560462 NAIPQ13075 1403 aa10.27□□□□□ -0.77
HERC1-208ENST00000560462 FSTL1Q12841 308 aa10.27□□□□□ -0.77
HERC1-208ENST00000560462 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
HERC1-208ENST00000560462 PTF1AQ7RTS3 328 aa10.27□□□□□ -0.77
HERC1-208ENST00000560462 TULP4Q9NRJ4 1543 aa10.27□□□□□ -0.77
HERC1-208ENST00000560462 PMFBP1Q8TBY8 1022 aa10.26□□□□□ -0.77
HERC1-208ENST00000560462 ABHD8Q96I13 439 aa10.26□□□□□ -0.77
HERC1-208ENST00000560462 ZBTB12Q9Y330 459 aaPredicted RBP10.26□□□□□ -0.77
HERC1-208ENST00000560462 ARHGEF28Q8N1W1 1705 aaKnown RBP10.25□□□□□ -0.77
HERC1-208ENST00000560462 RGS19P49795 217 aa10.25□□□□□ -0.77
HERC1-208ENST00000560462 C16orf71Q8IYS4 520 aaPredicted RBP10.25□□□□□ -0.77
HERC1-208ENST00000560462 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms