RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 NCBP3Q53F19 620 aaKnown RBP31.38■■■□□ 2.61
PIF1-208ENST00000560444 GOLGA2Q08379 1002 aa31.38■■■□□ 2.61
PIF1-208ENST00000560444 ACEP12821 1306 aa31.37■■■□□ 2.61
PIF1-208ENST00000560444 PELP1Q8IZL8 1130 aaKnown RBP31.37■■■□□ 2.61
PIF1-208ENST00000560444 ITSN1Q15811 1721 aa31.37■■■□□ 2.61
PIF1-208ENST00000560444 AATKQ6ZMQ8 1374 aa31.35■■■□□ 2.61
PIF1-208ENST00000560444 COL3A1P02461 1466 aaPredicted RBP31.35■■■□□ 2.61
PIF1-208ENST00000560444 ANKARQ7Z5J8 1434 aa31.35■■■□□ 2.61
PIF1-208ENST00000560444 COG3Q96JB2 828 aa31.35■■■□□ 2.61
PIF1-208ENST00000560444 RCAN3Q9UKA8 241 aa31.35■■■□□ 2.61
PIF1-208ENST00000560444 NME9Q86XW9 330 aa31.34■■■□□ 2.61
PIF1-208ENST00000560444 CHD2O14647 1828 aaKnown RBP31.33■■■□□ 2.61
PIF1-208ENST00000560444 IRX6P78412 446 aaPredicted RBP31.33■■■□□ 2.61
PIF1-208ENST00000560444 TTC21BQ7Z4L5 1316 aa31.32■■■□□ 2.6
PIF1-208ENST00000560444 U2AF1L5P0DN76 240 aaPredicted RBP31.31■■■□□ 2.6
PIF1-208ENST00000560444 U2AF1Q01081 240 aaKnown RBP eCLIP31.31■■■□□ 2.6
PIF1-208ENST00000560444 POLKQ9UBT6 870 aa31.31■■■□□ 2.6
PIF1-208ENST00000560444 DIAPH1O60610 1272 aaKnown RBP31.31■■■□□ 2.6
PIF1-208ENST00000560444 USP6P35125 1406 aa31.3■■■□□ 2.6
PIF1-208ENST00000560444 NUTM2FA1L443 756 aa31.3■■■□□ 2.6
PIF1-208ENST00000560444 SLFN5Q08AF3 891 aa31.29■■■□□ 2.6
PIF1-208ENST00000560444 TRMT2AQ8IZ69 625 aaKnown RBP31.28■■■□□ 2.6
PIF1-208ENST00000560444 NKTRP30414 1462 aaKnown RBP31.28■■■□□ 2.6
PIF1-208ENST00000560444 DUSP27Q5VZP5 1158 aa31.27■■■□□ 2.6
PIF1-208ENST00000560444 PNNQ9H307 717 aaKnown RBP31.27■■■□□ 2.6
PIF1-208ENST00000560444 PPP4R2Q9NY27 417 aa31.27■■■□□ 2.6
PIF1-208ENST00000560444 STRCQ7RTU9 1775 aa31.27■■■□□ 2.6
PIF1-208ENST00000560444 TCP11L2Q8N4U5 519 aa31.26■■■□□ 2.59
PIF1-208ENST00000560444 TTC21AQ8NDW8 1320 aa31.26■■■□□ 2.59
PIF1-208ENST00000560444 NRKQ7Z2Y5 1582 aa31.26■■■□□ 2.59
PIF1-208ENST00000560444 SSH2Q76I76 1423 aa31.25■■■□□ 2.59
PIF1-208ENST00000560444 IQSEC2Q5JU85 1478 aa31.25■■■□□ 2.59
PIF1-208ENST00000560444 E9PSI1 815 aa31.25■■■□□ 2.59
PIF1-208ENST00000560444 CCDC27Q2M243 656 aa31.25■■■□□ 2.59
PIF1-208ENST00000560444 WWC1Q8IX03 1113 aa31.24■■■□□ 2.59
PIF1-208ENST00000560444 U2SURPO15042 1029 aaKnown RBP31.23■■■□□ 2.59
PIF1-208ENST00000560444 PHF23Q9BUL5 403 aaPredicted RBP31.23■■■□□ 2.59
PIF1-208ENST00000560444 ZRANB1Q9UGI0 708 aa31.23■■■□□ 2.59
PIF1-208ENST00000560444 RRP1P56182 461 aaKnown RBP31.22■■■□□ 2.59
PIF1-208ENST00000560444 NGDNQ8NEJ9 315 aaKnown RBP31.22■■■□□ 2.59
PIF1-208ENST00000560444 FMN2Q9NZ56 1722 aa31.2■■■□□ 2.59
PIF1-208ENST00000560444 WDR63Q8IWG1 891 aa31.2■■■□□ 2.58
PIF1-208ENST00000560444 PMFBP1Q8TBY8 1022 aa31.2■■■□□ 2.58
PIF1-208ENST00000560444 RBM33Q96EV2 1170 aaKnown RBP31.2■■■□□ 2.58
PIF1-208ENST00000560444 PLEKHF1Q96S99 279 aa31.2■■■□□ 2.58
PIF1-208ENST00000560444 CDK12Q9NYV4 1490 aaPredicted RBP31.19■■■□□ 2.58
PIF1-208ENST00000560444 NWD1Q149M9 1564 aa31.19■■■□□ 2.58
PIF1-208ENST00000560444 OVOS2A0A0J9YW53 1432 aa31.18■■■□□ 2.58
PIF1-208ENST00000560444 OVOS2Q6IE36 1432 aa31.18■■■□□ 2.58
PIF1-208ENST00000560444 PPM1GO15355 546 aaPredicted RBP31.17■■■□□ 2.58
PIF1-208ENST00000560444 FCHSD2O94868 740 aa31.17■■■□□ 2.58
PIF1-208ENST00000560444 ADGRL3Q9HAR2 1447 aa31.16■■■□□ 2.58
PIF1-208ENST00000560444 FBLN1P23142 703 aa31.16■■■□□ 2.58
PIF1-208ENST00000560444 EMILIN1Q9Y6C2 1016 aa31.16■■■□□ 2.58
PIF1-208ENST00000560444 USP31Q70CQ4 1352 aa31.15■■■□□ 2.58
PIF1-208ENST00000560444 MAP2P11137 1827 aaKnown RBP31.15■■■□□ 2.58
PIF1-208ENST00000560444 MAPK8IP3Q9UPT6 1336 aa31.13■■■□□ 2.57
PIF1-208ENST00000560444 PROSER2Q86WR7 435 aaPredicted RBP31.13■■■□□ 2.57
PIF1-208ENST00000560444 NALCNQ8IZF0 1738 aa31.13■■■□□ 2.57
PIF1-208ENST00000560444 IL13P35225 146 aa31.12■■■□□ 2.57
PIF1-208ENST00000560444 SPINK5Q9NQ38 1064 aaPredicted RBP31.12■■■□□ 2.57
PIF1-208ENST00000560444 NEUROD2Q15784 382 aa31.11■■■□□ 2.57
PIF1-208ENST00000560444 RRP7AQ9Y3A4 280 aaKnown RBP31.11■■■□□ 2.57
PIF1-208ENST00000560444 RGPD8O14715 1765 aaPredicted RBP31.1■■■□□ 2.57
PIF1-208ENST00000560444 RRS1Q15050 365 aaKnown RBP31.09■■■□□ 2.57
PIF1-208ENST00000560444 STRCP1A6NGW2 1772 aa31.08■■■□□ 2.57
PIF1-208ENST00000560444 TMPOP42166 694 aaKnown RBP31.08■■■□□ 2.57
PIF1-208ENST00000560444 C14orf37Q86TY3 774 aa31.07■■■□□ 2.56
PIF1-208ENST00000560444 PHF8Q9UPP1 1060 aa31.07■■■□□ 2.56
PIF1-208ENST00000560444 DMRT2Q9Y5R5 561 aa31.07■■■□□ 2.56
PIF1-208ENST00000560444 NEFMP07197 916 aa31.06■■■□□ 2.56
PIF1-208ENST00000560444 RSPH6AQ9H0K4 717 aa31.06■■■□□ 2.56
PIF1-208ENST00000560444 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.02■■■□□ 2.56
PIF1-208ENST00000560444 ZNF335Q9H4Z2 1342 aaPredicted RBP31.02■■■□□ 2.56
PIF1-208ENST00000560444 MYH16Q9H6N6 1097 aa31.01■■■□□ 2.55
PIF1-208ENST00000560444 PRKAR2BP31323 418 aa30.99■■■□□ 2.55
PIF1-208ENST00000560444 TMEM94Q12767 1356 aa30.99■■■□□ 2.55
PIF1-208ENST00000560444 IL16Q14005 1332 aa30.99■■■□□ 2.55
PIF1-208ENST00000560444 TRIM35Q9UPQ4 493 aa30.98■■■□□ 2.55
PIF1-208ENST00000560444 RIPK4P57078 832 aa30.98■■■□□ 2.55
PIF1-208ENST00000560444 LRRC7Q96NW7 1537 aa30.98■■■□□ 2.55
PIF1-208ENST00000560444 NLRP6P59044 892 aa30.96■■■□□ 2.55
PIF1-208ENST00000560444 ESCO1Q5FWF5 840 aa30.96■■■□□ 2.55
PIF1-208ENST00000560444 C19orf44Q9H6X5 657 aa30.96■■■□□ 2.55
PIF1-208ENST00000560444 PIK3C2AO00443 1686 aa30.96■■■□□ 2.55
PIF1-208ENST00000560444 NCOA3Q9Y6Q9 1424 aa30.95■■■□□ 2.55
PIF1-208ENST00000560444 B4GALNT3Q6L9W6 998 aa30.95■■■□□ 2.54
PIF1-208ENST00000560444 HMOX1P09601 288 aa30.94■■■□□ 2.54
PIF1-208ENST00000560444 EIF4A2Q14240 407 aaKnown RBP30.94■■■□□ 2.54
PIF1-208ENST00000560444 USP54Q70EL1 1684 aa30.94■■■□□ 2.54
PIF1-208ENST00000560444 SBNO1A3KN83 1393 aa30.94■■■□□ 2.54
PIF1-208ENST00000560444 KIF24Q5T7B8 1368 aa30.94■■■□□ 2.54
PIF1-208ENST00000560444 ABTB2Q8N961 1025 aa30.93■■■□□ 2.54
PIF1-208ENST00000560444 PLIN1O60240 522 aa30.92■■■□□ 2.54
PIF1-208ENST00000560444 NFE2L2Q16236 605 aa30.92■■■□□ 2.54
PIF1-208ENST00000560444 MAP3K19Q56UN5 1328 aa30.92■■■□□ 2.54
PIF1-208ENST00000560444 PSME1Q06323 249 aa30.91■■■□□ 2.54
PIF1-208ENST00000560444 FLT4P35916 1363 aa30.91■■■□□ 2.54
PIF1-208ENST00000560444 EXOC6Q8TAG9 804 aa30.91■■■□□ 2.54
PIF1-208ENST00000560444 CCDC136Q96JN2 1154 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms