RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 FER1L4A9Z1Z3 1794 aa10.51□□□□□ -0.73
SMAD3-212ENST00000559937 DIP2AQ14689 1571 aa10.51□□□□□ -0.73
SMAD3-212ENST00000559937 NRKQ7Z2Y5 1582 aa10.51□□□□□ -0.73
SMAD3-212ENST00000559937 LMTK3Q96Q04 1460 aa10.5□□□□□ -0.73
SMAD3-212ENST00000559937 ANP32AP39687 249 aaKnown RBP10.5□□□□□ -0.73
SMAD3-212ENST00000559937 TNNT2P45379 298 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-212ENST00000559937 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
SMAD3-212ENST00000559937 ILDR1Q86SU0 546 aaPredicted RBP10.5□□□□□ -0.73
SMAD3-212ENST00000559937 MYH16Q9H6N6 1097 aa10.5□□□□□ -0.73
SMAD3-212ENST00000559937 IL16Q14005 1332 aa10.5□□□□□ -0.73
SMAD3-212ENST00000559937 TMEM2Q9UHN6 1383 aa10.5□□□□□ -0.73
SMAD3-212ENST00000559937 CDK12Q9NYV4 1490 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-212ENST00000559937 CEBPAP49715 358 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-212ENST00000559937 ERICH6Q7L0X2 663 aa10.49□□□□□ -0.73
SMAD3-212ENST00000559937 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
SMAD3-212ENST00000559937 NALCNQ8IZF0 1738 aa10.49□□□□□ -0.73
SMAD3-212ENST00000559937 PLEKHG1Q9ULL1 1385 aa10.49□□□□□ -0.73
SMAD3-212ENST00000559937 SLIT1O75093 1534 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 LRRC7Q96NW7 1537 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 WASLO00401 505 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-212ENST00000559937 U2AF1L5P0DN76 240 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-212ENST00000559937 HSPA2P54652 639 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 U2AF1Q01081 240 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMAD3-212ENST00000559937 BACH2Q9BYV9 841 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 GGNBP2Q9H3C7 697 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
SMAD3-212ENST00000559937 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
SMAD3-212ENST00000559937 DLG5Q8TDM6 1919 aa10.47□□□□□ -0.73
SMAD3-212ENST00000559937 PLEKHF1Q96S99 279 aa10.47□□□□□ -0.73
SMAD3-212ENST00000559937 CABP1Q9NZU7 370 aa10.47□□□□□ -0.73
SMAD3-212ENST00000559937 METP08581 1390 aa10.47□□□□□ -0.73
SMAD3-212ENST00000559937 ADAMTS13Q76LX8 1427 aa10.47□□□□□ -0.73
SMAD3-212ENST00000559937 ARHGAP23Q9P227 1491 aa10.47□□□□□ -0.73
SMAD3-212ENST00000559937 DIAPH1O60610 1272 aaKnown RBP10.46□□□□□ -0.73
SMAD3-212ENST00000559937 BCAR3O75815 825 aa10.46□□□□□ -0.73
SMAD3-212ENST00000559937 PDE4AP27815 886 aa10.46□□□□□ -0.73
SMAD3-212ENST00000559937 RARSP54136 660 aaKnown RBP10.46□□□□□ -0.73
SMAD3-212ENST00000559937 MAPK8IP3Q9UPT6 1336 aa10.46□□□□□ -0.73
SMAD3-212ENST00000559937 SETD1BQ9UPS6 1966 aaKnown RBP10.46□□□□□ -0.74
SMAD3-212ENST00000559937 TMPOP42166 694 aaKnown RBP10.45□□□□□ -0.74
SMAD3-212ENST00000559937 IPO9Q96P70 1041 aaKnown RBP10.45□□□□□ -0.74
SMAD3-212ENST00000559937 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
SMAD3-212ENST00000559937 FCHSD2O94868 740 aa10.44□□□□□ -0.74
SMAD3-212ENST00000559937 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
SMAD3-212ENST00000559937 RRP7AQ9Y3A4 280 aaKnown RBP10.44□□□□□ -0.74
SMAD3-212ENST00000559937 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
SMAD3-212ENST00000559937 FMN2Q9NZ56 1722 aa10.44□□□□□ -0.74
SMAD3-212ENST00000559937 U2SURPO15042 1029 aaKnown RBP10.43□□□□□ -0.74
SMAD3-212ENST00000559937 CANXP27824 592 aaKnown RBP10.43□□□□□ -0.74
SMAD3-212ENST00000559937 NEUROD2Q15784 382 aa10.43□□□□□ -0.74
SMAD3-212ENST00000559937 ZNF692Q9BU19 519 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-212ENST00000559937 USP54Q70EL1 1684 aa10.43□□□□□ -0.74
SMAD3-212ENST00000559937 PTCH1Q13635 1447 aa10.42□□□□□ -0.74
SMAD3-212ENST00000559937 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
SMAD3-212ENST00000559937 NUDT16Q96DE0 195 aaKnown RBP10.42□□□□□ -0.74
SMAD3-212ENST00000559937 CCDC61Q9Y6R9 512 aa10.42□□□□□ -0.74
SMAD3-212ENST00000559937 NEFMP07197 916 aa10.41□□□□□ -0.74
SMAD3-212ENST00000559937 PMFBP1Q8TBY8 1022 aa10.41□□□□□ -0.74
SMAD3-212ENST00000559937 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
SMAD3-212ENST00000559937 POLKQ9UBT6 870 aa10.41□□□□□ -0.74
SMAD3-212ENST00000559937 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
SMAD3-212ENST00000559937 RGPD1P0DJD0 1748 aa10.41□□□□□ -0.74
SMAD3-212ENST00000559937 CALD1Q05682 793 aaKnown RBP10.4□□□□□ -0.74
SMAD3-212ENST00000559937 TXNDC2Q86VQ3 553 aa10.4□□□□□ -0.74
SMAD3-212ENST00000559937 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
SMAD3-212ENST00000559937 ZNF142P52746 1687 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-212ENST00000559937 ROBO2Q9HCK4 1378 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 PLEKHG3A1L390 1219 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 ZKSCAN2Q63HK3 967 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 FBXO41Q8TF61 875 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 DDRGK1Q96HY6 314 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 SENP3Q9H4L4 574 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-212ENST00000559937 ZBTB47Q9UFB7 747 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-212ENST00000559937 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
SMAD3-212ENST00000559937 KIF16BQ96L93 1317 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 RIPK4P57078 832 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 NFE2L2Q16236 605 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 ALDH1L2Q3SY69 923 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.38□□□□□ -0.754e-6■■□□□ 13.1
SMAD3-212ENST00000559937 PANK1Q8TE04 598 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 COG3Q96JB2 828 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 TBX22Q9Y458 520 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 EID1Q9Y6B2 187 aa10.38□□□□□ -0.75
SMAD3-212ENST00000559937 RGPD8O14715 1765 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-212ENST00000559937 PRR36Q9H6K5 1346 aa10.37□□□□□ -0.75
SMAD3-212ENST00000559937 USP6P35125 1406 aa10.37□□□□□ -0.75
SMAD3-212ENST00000559937 BRPF1P55201 1214 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-212ENST00000559937 LMOD3Q0VAK6 560 aa10.37□□□□□ -0.75
SMAD3-212ENST00000559937 MVPQ14764 893 aaKnown RBP10.37□□□□□ -0.75
SMAD3-212ENST00000559937 PTPRUQ92729 1446 aa10.37□□□□□ -0.75
SMAD3-212ENST00000559937 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-212ENST00000559937 PIK3R4Q99570 1358 aa10.37□□□□□ -0.75
SMAD3-212ENST00000559937 PEAK1Q9H792 1746 aa10.36□□□□□ -0.75
SMAD3-212ENST00000559937 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-212ENST00000559937 SSH2Q76I76 1423 aa10.36□□□□□ -0.75
SMAD3-212ENST00000559937 ANKARQ7Z5J8 1434 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms