RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CARD14Q9BXL6 1004 aa19.68■□□□□ 0.74
SMAD6-204ENST00000559931 SOS2Q07890 1332 aaPredicted RBP19.67■□□□□ 0.74
SMAD6-204ENST00000559931 PLEKHG5O94827 1062 aa19.66■□□□□ 0.74
SMAD6-204ENST00000559931 ABTB2Q8N961 1025 aa19.66■□□□□ 0.74
SMAD6-204ENST00000559931 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
SMAD6-204ENST00000559931 TTC21BQ7Z4L5 1316 aa19.66■□□□□ 0.74
SMAD6-204ENST00000559931 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
SMAD6-204ENST00000559931 BRD4O60885 1362 aaPredicted RBP19.65■□□□□ 0.74
SMAD6-204ENST00000559931 EDC4Q6P2E9 1401 aaKnown RBP19.65■□□□□ 0.74
SMAD6-204ENST00000559931 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
SMAD6-204ENST00000559931 CNGB1Q14028 1251 aaPredicted RBP19.64■□□□□ 0.73
SMAD6-204ENST00000559931 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.73
SMAD6-204ENST00000559931 JCADQ9P266 1359 aa19.64■□□□□ 0.73
SMAD6-204ENST00000559931 PXDNQ92626 1479 aa19.64■□□□□ 0.73
SMAD6-204ENST00000559931 SBNO1A3KN83 1393 aa19.63■□□□□ 0.73
SMAD6-204ENST00000559931 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
SMAD6-204ENST00000559931 TTC21AQ8NDW8 1320 aa19.63■□□□□ 0.73
SMAD6-204ENST00000559931 SPATA31A3Q5VYP0 1347 aa19.62■□□□□ 0.73
SMAD6-204ENST00000559931 NLRP6P59044 892 aa19.62■□□□□ 0.73
SMAD6-204ENST00000559931 NME9Q86XW9 330 aa19.62■□□□□ 0.73
SMAD6-204ENST00000559931 SHPRHQ149N8 1683 aa19.61■□□□□ 0.73
SMAD6-204ENST00000559931 PER1O15534 1290 aaPredicted RBP19.6■□□□□ 0.73
SMAD6-204ENST00000559931 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
SMAD6-204ENST00000559931 TNS3Q68CZ2 1445 aa19.59■□□□□ 0.73
SMAD6-204ENST00000559931 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
SMAD6-204ENST00000559931 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
SMAD6-204ENST00000559931 FYB1O15117 783 aa19.59■□□□□ 0.73
SMAD6-204ENST00000559931 GGNBP2Q9H3C7 697 aa19.59■□□□□ 0.73
SMAD6-204ENST00000559931 ZRANB1Q9UGI0 708 aa19.59■□□□□ 0.73
SMAD6-204ENST00000559931 ARHGEF10O15013 1369 aa19.58■□□□□ 0.73
SMAD6-204ENST00000559931 NUTM2BA6NNL0 878 aaPredicted RBP19.58■□□□□ 0.72
SMAD6-204ENST00000559931 NUTM2EB1AL46 878 aaPredicted RBP19.58■□□□□ 0.72
SMAD6-204ENST00000559931 HAP1P54257 671 aaPredicted RBP19.58■□□□□ 0.72
SMAD6-204ENST00000559931 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
SMAD6-204ENST00000559931 NUTM2AQ8IVF1 878 aaPredicted RBP19.58■□□□□ 0.72
SMAD6-204ENST00000559931 COG3Q96JB2 828 aa19.58■□□□□ 0.72
SMAD6-204ENST00000559931 PNPLA6Q8IY17 1366 aa19.57■□□□□ 0.72
SMAD6-204ENST00000559931 NRKQ7Z2Y5 1582 aa19.56■□□□□ 0.72
SMAD6-204ENST00000559931 MED1Q15648 1581 aaPredicted RBP19.55■□□□□ 0.72
SMAD6-204ENST00000559931 CABLES1Q8TDN4 633 aa19.55■□□□□ 0.72
SMAD6-204ENST00000559931 KIF20BQ96Q89 1820 aa19.55■□□□□ 0.72
SMAD6-204ENST00000559931 SOX12O15370 315 aa19.54■□□□□ 0.72
SMAD6-204ENST00000559931 AMER1Q5JTC6 1135 aaPredicted RBP19.54■□□□□ 0.72
SMAD6-204ENST00000559931 MORC1Q86VD1 984 aa19.54■□□□□ 0.72
SMAD6-204ENST00000559931 ALS2Q96Q42 1657 aa19.54■□□□□ 0.72
SMAD6-204ENST00000559931 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
SMAD6-204ENST00000559931 PIK3C2AO00443 1686 aa19.52■□□□□ 0.72
SMAD6-204ENST00000559931 TNNT2P45379 298 aaPredicted RBP19.52■□□□□ 0.72
SMAD6-204ENST00000559931 MEX3CQ5U5Q3 659 aaKnown RBP19.51■□□□□ 0.71
SMAD6-204ENST00000559931 NSD2O96028 1365 aa19.51■□□□□ 0.71
SMAD6-204ENST00000559931 USP31Q70CQ4 1352 aa19.51■□□□□ 0.71
SMAD6-204ENST00000559931 LRP6O75581 1613 aa19.51■□□□□ 0.71
SMAD6-204ENST00000559931 COL22A1Q8NFW1 1626 aaPredicted RBP19.5■□□□□ 0.71
SMAD6-204ENST00000559931 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
SMAD6-204ENST00000559931 KCNH5Q8NCM2 988 aa19.49■□□□□ 0.71
SMAD6-204ENST00000559931 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
SMAD6-204ENST00000559931 GCP02774 474 aa19.48■□□□□ 0.71
SMAD6-204ENST00000559931 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
SMAD6-204ENST00000559931 NPC1L1Q9UHC9 1359 aa19.47■□□□□ 0.71
SMAD6-204ENST00000559931 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
SMAD6-204ENST00000559931 ZC3H6P61129 1189 aaKnown RBP19.46■□□□□ 0.71
SMAD6-204ENST00000559931 USP19O94966 1318 aa19.46■□□□□ 0.71
SMAD6-204ENST00000559931 ANKRD26Q9UPS8 1709 aa19.45■□□□□ 0.7
SMAD6-204ENST00000559931 OVOS2A0A0J9YW53 1432 aa19.45■□□□□ 0.7
SMAD6-204ENST00000559931 OVOS2Q6IE36 1432 aa19.45■□□□□ 0.7
SMAD6-204ENST00000559931 ANP32CO43423 234 aa19.45■□□□□ 0.7
SMAD6-204ENST00000559931 FBLN1P23142 703 aa19.45■□□□□ 0.7
SMAD6-204ENST00000559931 PPM1GO15355 546 aaPredicted RBP19.43■□□□□ 0.7
SMAD6-204ENST00000559931 RALBP1Q15311 655 aa19.43■□□□□ 0.7
SMAD6-204ENST00000559931 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
SMAD6-204ENST00000559931 MARF1Q9Y4F3 1742 aaKnown RBP19.42■□□□□ 0.7
SMAD6-204ENST00000559931 C8orf37Q96NL8 207 aa19.42■□□□□ 0.7
SMAD6-204ENST00000559931 USP54Q70EL1 1684 aa19.41■□□□□ 0.7
SMAD6-204ENST00000559931 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
SMAD6-204ENST00000559931 PRDM11Q9NQV5 511 aa19.41■□□□□ 0.7
SMAD6-204ENST00000559931 SLIT3O75094 1523 aa19.41■□□□□ 0.7
SMAD6-204ENST00000559931 PHRF1Q9P1Y6 1649 aaKnown RBP19.4■□□□□ 0.7
SMAD6-204ENST00000559931 MAP2P11137 1827 aaKnown RBP19.4■□□□□ 0.7
SMAD6-204ENST00000559931 AMPHP49418 695 aa19.4■□□□□ 0.7
SMAD6-204ENST00000559931 CHRNA2Q15822 529 aa19.39■□□□□ 0.69
SMAD6-204ENST00000559931 NGLY1Q96IV0 654 aa19.39■□□□□ 0.69
SMAD6-204ENST00000559931 PRKRIP1Q9H875 184 aaPredicted RBP19.39■□□□□ 0.69
SMAD6-204ENST00000559931 CRYBG1Q9Y4K1 1723 aa19.39■□□□□ 0.69
SMAD6-204ENST00000559931 ARHGEF25Q86VW2 580 aa19.38■□□□□ 0.69
SMAD6-204ENST00000559931 KIAA0232Q92628 1395 aa19.38■□□□□ 0.69
SMAD6-204ENST00000559931 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
SMAD6-204ENST00000559931 MAP3K19Q56UN5 1328 aa19.37■□□□□ 0.69
SMAD6-204ENST00000559931 PPP2R1AP30153 589 aa19.37■□□□□ 0.69
SMAD6-204ENST00000559931 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
SMAD6-204ENST00000559931 RGS17Q9UGC6 210 aaPredicted RBP19.37■□□□□ 0.69
SMAD6-204ENST00000559931 AATKQ6ZMQ8 1374 aa19.36■□□□□ 0.69
SMAD6-204ENST00000559931 AFF2P51816 1311 aa19.36■□□□□ 0.69
SMAD6-204ENST00000559931 FAM83GA6ND36 823 aa19.36■□□□□ 0.69
SMAD6-204ENST00000559931 MTHFSP49914 203 aa19.36■□□□□ 0.69
SMAD6-204ENST00000559931 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
SMAD6-204ENST00000559931 LTN1O94822 1766 aa19.36■□□□□ 0.69
SMAD6-204ENST00000559931 NFAT5O94916 1531 aa19.35■□□□□ 0.69
SMAD6-204ENST00000559931 CPDO75976 1380 aa19.34■□□□□ 0.69
SMAD6-204ENST00000559931 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
SMAD6-204ENST00000559931 EVA1CP58658 441 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms