RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
HMG20A-209ENST00000559728 XPCQ01831 940 aaPredicted RBP12.66□□□□□ -0.38
HMG20A-209ENST00000559728 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
HMG20A-209ENST00000559728 NHSL1Q5SYE7 1610 aa12.66□□□□□ -0.38
HMG20A-209ENST00000559728 KIF7Q2M1P5 1343 aa12.65□□□□□ -0.38
HMG20A-209ENST00000559728 RGPD8O14715 1765 aaPredicted RBP12.65□□□□□ -0.38
HMG20A-209ENST00000559728 WASHC2AQ641Q2 1341 aa12.64□□□□□ -0.39
HMG20A-209ENST00000559728 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
HMG20A-209ENST00000559728 MKRN4PQ13434 485 aaPredicted RBP12.64□□□□□ -0.39
HMG20A-209ENST00000559728 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
HMG20A-209ENST00000559728 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
HMG20A-209ENST00000559728 A0A1W2PP64 1363 aa12.62□□□□□ -0.39
HMG20A-209ENST00000559728 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
HMG20A-209ENST00000559728 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
HMG20A-209ENST00000559728 USP6P35125 1406 aa12.62□□□□□ -0.39
HMG20A-209ENST00000559728 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
HMG20A-209ENST00000559728 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
HMG20A-209ENST00000559728 CCDC7Q96M83 1385 aa12.61□□□□□ -0.39
HMG20A-209ENST00000559728 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
HMG20A-209ENST00000559728 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
HMG20A-209ENST00000559728 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
HMG20A-209ENST00000559728 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
HMG20A-209ENST00000559728 PSME1Q06323 249 aa12.6□□□□□ -0.39
HMG20A-209ENST00000559728 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
HMG20A-209ENST00000559728 ANKRD36BQ8N2N9 1353 aa12.59□□□□□ -0.39
HMG20A-209ENST00000559728 MYOM1P52179 1685 aa12.59□□□□□ -0.39
HMG20A-209ENST00000559728 LRRC59Q96AG4 307 aaKnown RBP12.59□□□□□ -0.39
HMG20A-209ENST00000559728 PHLPP1O60346 1717 aa12.59□□□□□ -0.39
HMG20A-209ENST00000559728 ITSN1Q15811 1721 aa12.59□□□□□ -0.39
HMG20A-209ENST00000559728 TNS3Q68CZ2 1445 aa12.58□□□□□ -0.4
HMG20A-209ENST00000559728 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
HMG20A-209ENST00000559728 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.4
HMG20A-209ENST00000559728 KTN1Q86UP2 1357 aaKnown RBP12.57□□□□□ -0.4
HMG20A-209ENST00000559728 JCADQ9P266 1359 aa12.57□□□□□ -0.4
HMG20A-209ENST00000559728 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
HMG20A-209ENST00000559728 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
HMG20A-209ENST00000559728 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
HMG20A-209ENST00000559728 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
HMG20A-209ENST00000559728 HDGFL2Q7Z4V5 671 aaPredicted RBP12.55□□□□□ -0.4
HMG20A-209ENST00000559728 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
HMG20A-209ENST00000559728 PANK3Q9H999 370 aa12.55□□□□□ -0.4
HMG20A-209ENST00000559728 TERF2IPQ9NYB0 399 aa12.55□□□□□ -0.4
HMG20A-209ENST00000559728 ZRANB1Q9UGI0 708 aa12.55□□□□□ -0.4
HMG20A-209ENST00000559728 LRP6O75581 1613 aa12.55□□□□□ -0.4
HMG20A-209ENST00000559728 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
HMG20A-209ENST00000559728 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
HMG20A-209ENST00000559728 NME9Q86XW9 330 aa12.54□□□□□ -0.4
HMG20A-209ENST00000559728 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
HMG20A-209ENST00000559728 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
HMG20A-209ENST00000559728 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
HMG20A-209ENST00000559728 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
HMG20A-209ENST00000559728 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
HMG20A-209ENST00000559728 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
HMG20A-209ENST00000559728 USP19O94966 1318 aa12.53□□□□□ -0.4
HMG20A-209ENST00000559728 TTC21AQ8NDW8 1320 aa12.53□□□□□ -0.4
HMG20A-209ENST00000559728 ARHGEF10O15013 1369 aa12.53□□□□□ -0.4
HMG20A-209ENST00000559728 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
HMG20A-209ENST00000559728 SHPRHQ149N8 1683 aa12.52□□□□□ -0.4
HMG20A-209ENST00000559728 FYB1O15117 783 aa12.52□□□□□ -0.41
HMG20A-209ENST00000559728 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
HMG20A-209ENST00000559728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMG20A-209ENST00000559728 ABTB2Q8N961 1025 aa12.52□□□□□ -0.41
HMG20A-209ENST00000559728 SPATA31A6Q5VVP1 1343 aa12.52□□□□□ -0.41
HMG20A-209ENST00000559728 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
HMG20A-209ENST00000559728 OVOS2A0A0J9YW53 1432 aa12.51□□□□□ -0.41
HMG20A-209ENST00000559728 OVOS2Q6IE36 1432 aa12.51□□□□□ -0.41
HMG20A-209ENST00000559728 CRYBG1Q9Y4K1 1723 aa12.49□□□□□ -0.41
HMG20A-209ENST00000559728 SLIT3O75094 1523 aa12.49□□□□□ -0.41
HMG20A-209ENST00000559728 NLRP6P59044 892 aa12.49□□□□□ -0.41
HMG20A-209ENST00000559728 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
HMG20A-209ENST00000559728 LMOD2Q6P5Q4 547 aa12.49□□□□□ -0.41
HMG20A-209ENST00000559728 MARF1Q9Y4F3 1742 aaKnown RBP12.48□□□□□ -0.41
HMG20A-209ENST00000559728 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
HMG20A-209ENST00000559728 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
HMG20A-209ENST00000559728 GGNBP2Q9H3C7 697 aa12.48□□□□□ -0.41
HMG20A-209ENST00000559728 NUTM2BA6NNL0 878 aaPredicted RBP12.47□□□□□ -0.41
HMG20A-209ENST00000559728 NUTM2EB1AL46 878 aaPredicted RBP12.47□□□□□ -0.41
HMG20A-209ENST00000559728 GCP02774 474 aa12.47□□□□□ -0.41
HMG20A-209ENST00000559728 NUTM2AQ8IVF1 878 aaPredicted RBP12.47□□□□□ -0.41
HMG20A-209ENST00000559728 USP54Q70EL1 1684 aa12.46□□□□□ -0.41
HMG20A-209ENST00000559728 PLEKHG5O94827 1062 aa12.46□□□□□ -0.41
HMG20A-209ENST00000559728 FBLN1P23142 703 aa12.46□□□□□ -0.41
HMG20A-209ENST00000559728 NFAT5O94916 1531 aa12.46□□□□□ -0.42
HMG20A-209ENST00000559728 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
HMG20A-209ENST00000559728 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
HMG20A-209ENST00000559728 FKBP8Q14318 412 aa12.45□□□□□ -0.42
HMG20A-209ENST00000559728 ABCA3Q99758 1704 aa12.45□□□□□ -0.42
HMG20A-209ENST00000559728 CPDO75976 1380 aa12.44□□□□□ -0.42
HMG20A-209ENST00000559728 CGNL1Q0VF96 1302 aa12.44□□□□□ -0.42
HMG20A-209ENST00000559728 DDX10Q13206 875 aaKnown RBP12.44□□□□□ -0.42
HMG20A-209ENST00000559728 RGS17Q9UGC6 210 aaPredicted RBP12.44□□□□□ -0.42
HMG20A-209ENST00000559728 PHRF1Q9P1Y6 1649 aaKnown RBP12.44□□□□□ -0.42
HMG20A-209ENST00000559728 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
HMG20A-209ENST00000559728 ARHGEF25Q86VW2 580 aa12.43□□□□□ -0.42
HMG20A-209ENST00000559728 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
HMG20A-209ENST00000559728 ZC3H6P61129 1189 aaKnown RBP12.42□□□□□ -0.42
HMG20A-209ENST00000559728 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
HMG20A-209ENST00000559728 COG3Q96JB2 828 aa12.42□□□□□ -0.42
HMG20A-209ENST00000559728 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
HMG20A-209ENST00000559728 NSD2O96028 1365 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms