RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SBNO1A3KN83 1393 aa20.53■□□□□ 0.88
SNRPA1-207ENST00000559309 TERF2IPQ9NYB0 399 aa20.52■□□□□ 0.88
SNRPA1-207ENST00000559309 PHLPP1O60346 1717 aa20.52■□□□□ 0.88
SNRPA1-207ENST00000559309 MARF1Q9Y4F3 1742 aaKnown RBP20.51■□□□□ 0.87
SNRPA1-207ENST00000559309 TMC1Q8TDI8 760 aa20.51■□□□□ 0.87
SNRPA1-207ENST00000559309 PIK3C2AO00443 1686 aa20.51■□□□□ 0.87
SNRPA1-207ENST00000559309 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-207ENST00000559309 NGDNQ8NEJ9 315 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-207ENST00000559309 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
SNRPA1-207ENST00000559309 CRYBG1Q9Y4K1 1723 aa20.5■□□□□ 0.87
SNRPA1-207ENST00000559309 COL22A1Q8NFW1 1626 aaPredicted RBP20.49■□□□□ 0.87
SNRPA1-207ENST00000559309 KRT28Q7Z3Y7 464 aa20.48■□□□□ 0.87
SNRPA1-207ENST00000559309 HDGFL2Q7Z4V5 671 aaPredicted RBP20.48■□□□□ 0.87
SNRPA1-207ENST00000559309 PANK3Q9H999 370 aa20.48■□□□□ 0.87
SNRPA1-207ENST00000559309 TTC21BQ7Z4L5 1316 aa20.48■□□□□ 0.87
SNRPA1-207ENST00000559309 TNS3Q68CZ2 1445 aa20.47■□□□□ 0.87
SNRPA1-207ENST00000559309 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
SNRPA1-207ENST00000559309 TTC21AQ8NDW8 1320 aa20.47■□□□□ 0.87
SNRPA1-207ENST00000559309 NSD3Q9BZ95 1437 aa20.46■□□□□ 0.87
SNRPA1-207ENST00000559309 USP31Q70CQ4 1352 aa20.46■□□□□ 0.87
SNRPA1-207ENST00000559309 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
SNRPA1-207ENST00000559309 PSME1Q06323 249 aa20.45■□□□□ 0.86
SNRPA1-207ENST00000559309 KIF20BQ96Q89 1820 aa20.45■□□□□ 0.86
SNRPA1-207ENST00000559309 SHPRHQ149N8 1683 aa20.45■□□□□ 0.86
SNRPA1-207ENST00000559309 ANKRD26Q9UPS8 1709 aa20.44■□□□□ 0.86
SNRPA1-207ENST00000559309 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
SNRPA1-207ENST00000559309 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
SNRPA1-207ENST00000559309 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
SNRPA1-207ENST00000559309 AMER1Q5JTC6 1135 aaPredicted RBP20.42■□□□□ 0.86
SNRPA1-207ENST00000559309 POTEAQ6S8J7 498 aa20.42■□□□□ 0.86
SNRPA1-207ENST00000559309 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
SNRPA1-207ENST00000559309 XPCQ01831 940 aaPredicted RBP20.41■□□□□ 0.86
SNRPA1-207ENST00000559309 SLIT3O75094 1523 aa20.41■□□□□ 0.86
SNRPA1-207ENST00000559309 ARHGEF10O15013 1369 aa20.4■□□□□ 0.86
SNRPA1-207ENST00000559309 FYB1O15117 783 aa20.4■□□□□ 0.86
SNRPA1-207ENST00000559309 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
SNRPA1-207ENST00000559309 LRRC59Q96AG4 307 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-207ENST00000559309 NSD2O96028 1365 aa20.39■□□□□ 0.85
SNRPA1-207ENST00000559309 USP19O94966 1318 aa20.39■□□□□ 0.85
SNRPA1-207ENST00000559309 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-207ENST00000559309 PHRF1Q9P1Y6 1649 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-207ENST00000559309 JCADQ9P266 1359 aa20.36■□□□□ 0.85
SNRPA1-207ENST00000559309 CGNL1Q0VF96 1302 aa20.36■□□□□ 0.85
SNRPA1-207ENST00000559309 NME9Q86XW9 330 aa20.36■□□□□ 0.85
SNRPA1-207ENST00000559309 NFAT5O94916 1531 aa20.35■□□□□ 0.85
SNRPA1-207ENST00000559309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
SNRPA1-207ENST00000559309 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
SNRPA1-207ENST00000559309 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
SNRPA1-207ENST00000559309 ABTB2Q8N961 1025 aa20.32■□□□□ 0.84
SNRPA1-207ENST00000559309 PAK3O75914 559 aaPredicted RBP20.31■□□□□ 0.84
SNRPA1-207ENST00000559309 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
SNRPA1-207ENST00000559309 NLRP6P59044 892 aa20.29■□□□□ 0.84
SNRPA1-207ENST00000559309 GGNBP2Q9H3C7 697 aa20.29■□□□□ 0.84
SNRPA1-207ENST00000559309 PARD3Q8TEW0 1356 aa20.29■□□□□ 0.84
SNRPA1-207ENST00000559309 AATKQ6ZMQ8 1374 aa20.28■□□□□ 0.84
SNRPA1-207ENST00000559309 SPATA31A6Q5VVP1 1343 aa20.27■□□□□ 0.84
SNRPA1-207ENST00000559309 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
SNRPA1-207ENST00000559309 COL18A1P39060 1754 aa20.26■□□□□ 0.83
SNRPA1-207ENST00000559309 CPDO75976 1380 aa20.26■□□□□ 0.83
SNRPA1-207ENST00000559309 COG3Q96JB2 828 aa20.26■□□□□ 0.83
SNRPA1-207ENST00000559309 ABCC6O95255 1503 aa20.26■□□□□ 0.83
SNRPA1-207ENST00000559309 LRP6O75581 1613 aa20.25■□□□□ 0.83
SNRPA1-207ENST00000559309 GCP02774 474 aa20.25■□□□□ 0.83
SNRPA1-207ENST00000559309 LMO7Q8WWI1 1683 aa20.24■□□□□ 0.83
SNRPA1-207ENST00000559309 NUTM2GQ5VZR2 741 aa20.24■□□□□ 0.83
SNRPA1-207ENST00000559309 KCNH5Q8NCM2 988 aa20.23■□□□□ 0.83
SNRPA1-207ENST00000559309 LTN1O94822 1766 aa20.23■□□□□ 0.83
SNRPA1-207ENST00000559309 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
SNRPA1-207ENST00000559309 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
SNRPA1-207ENST00000559309 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-207ENST00000559309 CC2D1BQ5T0F9 858 aaKnown RBP20.21■□□□□ 0.83
SNRPA1-207ENST00000559309 ARHGEF25Q86VW2 580 aa20.21■□□□□ 0.83
SNRPA1-207ENST00000559309 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
SNRPA1-207ENST00000559309 LMOD2Q6P5Q4 547 aa20.2■□□□□ 0.82
SNRPA1-207ENST00000559309 PRKRIP1Q9H875 184 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-207ENST00000559309 ZNF772Q68DY9 489 aaPredicted RBP20.19■□□□□ 0.82
SNRPA1-207ENST00000559309 COL14A1Q05707 1796 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-207ENST00000559309 RALBP1Q15311 655 aa20.18■□□□□ 0.82
SNRPA1-207ENST00000559309 MORC1Q86VD1 984 aa20.18■□□□□ 0.82
SNRPA1-207ENST00000559309 INSRP06213 1382 aa20.18■□□□□ 0.82
SNRPA1-207ENST00000559309 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
SNRPA1-207ENST00000559309 FBLN1P23142 703 aa20.16■□□□□ 0.82
SNRPA1-207ENST00000559309 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
SNRPA1-207ENST00000559309 RTL1A6NKG5 1358 aa20.16■□□□□ 0.82
SNRPA1-207ENST00000559309 KIAA0232Q92628 1395 aa20.16■□□□□ 0.82
SNRPA1-207ENST00000559309 SLIT2O94813 1529 aa20.16■□□□□ 0.82
SNRPA1-207ENST00000559309 NWD2Q9ULI1 1742 aa20.16■□□□□ 0.82
SNRPA1-207ENST00000559309 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
SNRPA1-207ENST00000559309 CDK12Q9NYV4 1490 aaPredicted RBP20.15■□□□□ 0.82
SNRPA1-207ENST00000559309 PLCH1Q4KWH8 1693 aa20.15■□□□□ 0.82
SNRPA1-207ENST00000559309 NRAPQ86VF7 1730 aa20.15■□□□□ 0.82
SNRPA1-207ENST00000559309 CAMTA1Q9Y6Y1 1673 aa20.13■□□□□ 0.81
SNRPA1-207ENST00000559309 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
SNRPA1-207ENST00000559309 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
SNRPA1-207ENST00000559309 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
SNRPA1-207ENST00000559309 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
SNRPA1-207ENST00000559309 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
SNRPA1-207ENST00000559309 FLT4P35916 1363 aa20.11■□□□□ 0.81
SNRPA1-207ENST00000559309 FAM83GA6ND36 823 aa20.11■□□□□ 0.81
SNRPA1-207ENST00000559309 RRS1Q15050 365 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms