RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.57■■□□□ 1.04
CDC42BPB-204ENST00000559043 MON2Q7Z3U7 1717 aa21.57■■□□□ 1.04
CDC42BPB-204ENST00000559043 TTC21BQ7Z4L5 1316 aa21.56■■□□□ 1.04
CDC42BPB-204ENST00000559043 AMER1Q5JTC6 1135 aaPredicted RBP21.56■■□□□ 1.04
CDC42BPB-204ENST00000559043 ZRANB1Q9UGI0 708 aa21.56■■□□□ 1.04
CDC42BPB-204ENST00000559043 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
CDC42BPB-204ENST00000559043 PXDNQ92626 1479 aa21.55■■□□□ 1.04
CDC42BPB-204ENST00000559043 KNSTRNQ9Y448 316 aa21.54■■□□□ 1.04
CDC42BPB-204ENST00000559043 SUPT16HQ9Y5B9 1047 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-204ENST00000559043 EDC4Q6P2E9 1401 aaKnown RBP21.54■■□□□ 1.04
CDC42BPB-204ENST00000559043 SOS2Q07890 1332 aaPredicted RBP21.54■■□□□ 1.04
CDC42BPB-204ENST00000559043 FYB1O15117 783 aa21.54■■□□□ 1.04
CDC42BPB-204ENST00000559043 NME9Q86XW9 330 aa21.54■■□□□ 1.04
CDC42BPB-204ENST00000559043 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
CDC42BPB-204ENST00000559043 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
CDC42BPB-204ENST00000559043 PAK3O75914 559 aaPredicted RBP21.52■■□□□ 1.04
CDC42BPB-204ENST00000559043 NHSL1Q5SYE7 1610 aa21.52■■□□□ 1.04
CDC42BPB-204ENST00000559043 TRPM3Q9HCF6 1732 aaPredicted RBP21.51■■□□□ 1.03
CDC42BPB-204ENST00000559043 GGNBP2Q9H3C7 697 aa21.5■■□□□ 1.03
CDC42BPB-204ENST00000559043 PRKRIP1Q9H875 184 aaPredicted RBP21.5■■□□□ 1.03
CDC42BPB-204ENST00000559043 CC2D1BQ5T0F9 858 aaKnown RBP21.49■■□□□ 1.03
CDC42BPB-204ENST00000559043 NUTM2GQ5VZR2 741 aa21.49■■□□□ 1.03
CDC42BPB-204ENST00000559043 CGNL1Q0VF96 1302 aa21.48■■□□□ 1.03
CDC42BPB-204ENST00000559043 AHDC1Q5TGY3 1603 aaPredicted RBP21.48■■□□□ 1.03
CDC42BPB-204ENST00000559043 SPATA31A3Q5VYP0 1347 aa21.48■■□□□ 1.03
CDC42BPB-204ENST00000559043 ABTB2Q8N961 1025 aa21.47■■□□□ 1.03
CDC42BPB-204ENST00000559043 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
CDC42BPB-204ENST00000559043 SBNO1A3KN83 1393 aa21.47■■□□□ 1.03
CDC42BPB-204ENST00000559043 BRD4O60885 1362 aaPredicted RBP21.46■■□□□ 1.03
CDC42BPB-204ENST00000559043 PIK3C2AO00443 1686 aa21.45■■□□□ 1.03
CDC42BPB-204ENST00000559043 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
CDC42BPB-204ENST00000559043 FBLN1P23142 703 aa21.44■■□□□ 1.02
CDC42BPB-204ENST00000559043 NPC1L1Q9UHC9 1359 aa21.44■■□□□ 1.02
CDC42BPB-204ENST00000559043 ALS2Q96Q42 1657 aa21.44■■□□□ 1.02
CDC42BPB-204ENST00000559043 NLRP6P59044 892 aa21.43■■□□□ 1.02
CDC42BPB-204ENST00000559043 PHLPP1O60346 1717 aa21.42■■□□□ 1.02
CDC42BPB-204ENST00000559043 TNS3Q68CZ2 1445 aa21.42■■□□□ 1.02
CDC42BPB-204ENST00000559043 COL16A1Q07092 1604 aaPredicted RBP21.42■■□□□ 1.02
CDC42BPB-204ENST00000559043 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
CDC42BPB-204ENST00000559043 HSPA1LP34931 641 aa21.41■■□□□ 1.02
CDC42BPB-204ENST00000559043 USP31Q70CQ4 1352 aa21.41■■□□□ 1.02
CDC42BPB-204ENST00000559043 KIF20BQ96Q89 1820 aa21.41■■□□□ 1.02
CDC42BPB-204ENST00000559043 LRRC59Q96AG4 307 aaKnown RBP21.41■■□□□ 1.02
CDC42BPB-204ENST00000559043 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
CDC42BPB-204ENST00000559043 OVOS2A0A0J9YW53 1432 aa21.4■■□□□ 1.02
CDC42BPB-204ENST00000559043 OVOS2Q6IE36 1432 aa21.4■■□□□ 1.02
CDC42BPB-204ENST00000559043 CABLES1Q8TDN4 633 aa21.4■■□□□ 1.02
CDC42BPB-204ENST00000559043 TNNT2P45379 298 aaPredicted RBP21.39■■□□□ 1.01
CDC42BPB-204ENST00000559043 CCDC184Q52MB2 194 aa21.39■■□□□ 1.01
CDC42BPB-204ENST00000559043 COG3Q96JB2 828 aa21.39■■□□□ 1.01
CDC42BPB-204ENST00000559043 MORC1Q86VD1 984 aa21.38■■□□□ 1.01
CDC42BPB-204ENST00000559043 NSD2O96028 1365 aa21.38■■□□□ 1.01
CDC42BPB-204ENST00000559043 NLRP13Q86W25 1043 aa21.37■■□□□ 1.01
CDC42BPB-204ENST00000559043 PARD3Q8TEW0 1356 aa21.37■■□□□ 1.01
CDC42BPB-204ENST00000559043 MED1Q15648 1581 aaPredicted RBP21.36■■□□□ 1.01
CDC42BPB-204ENST00000559043 SOX12O15370 315 aa21.36■■□□□ 1.01
CDC42BPB-204ENST00000559043 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
CDC42BPB-204ENST00000559043 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
CDC42BPB-204ENST00000559043 USP19O94966 1318 aa21.35■■□□□ 1.01
CDC42BPB-204ENST00000559043 ANKRD26Q9UPS8 1709 aa21.35■■□□□ 1.01
CDC42BPB-204ENST00000559043 PNPLA6Q8IY17 1366 aa21.35■■□□□ 1.01
CDC42BPB-204ENST00000559043 FBXO41Q8TF61 875 aa21.34■■□□□ 1.01
CDC42BPB-204ENST00000559043 USP54Q70EL1 1684 aa21.33■■□□□ 1.01
CDC42BPB-204ENST00000559043 GCP02774 474 aa21.33■■□□□ 1.01
CDC42BPB-204ENST00000559043 MRS2Q9HD23 443 aa21.32■■□□□ 1
CDC42BPB-204ENST00000559043 RALBP1Q15311 655 aa21.32■■□□□ 1
CDC42BPB-204ENST00000559043 PPP2R1AP30153 589 aa21.31■■□□□ 1
CDC42BPB-204ENST00000559043 CRYBG1Q9Y4K1 1723 aa21.31■■□□□ 1
CDC42BPB-204ENST00000559043 RRS1Q15050 365 aaKnown RBP21.3■■□□□ 1
CDC42BPB-204ENST00000559043 SLIT3O75094 1523 aa21.3■■□□□ 1
CDC42BPB-204ENST00000559043 POLKQ9UBT6 870 aa21.29■■□□□ 1
CDC42BPB-204ENST00000559043 NFAT5O94916 1531 aa21.28■■□□□ 1
CDC42BPB-204ENST00000559043 FKBP8Q14318 412 aa21.28■■□□□ 1
CDC42BPB-204ENST00000559043 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
CDC42BPB-204ENST00000559043 ZC3H6P61129 1189 aaKnown RBP21.27■■□□□ 1
CDC42BPB-204ENST00000559043 COL22A1Q8NFW1 1626 aaPredicted RBP21.27■■□□□ 1
CDC42BPB-204ENST00000559043 PHRF1Q9P1Y6 1649 aaKnown RBP21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 AATKQ6ZMQ8 1374 aa21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 JCADQ9P266 1359 aa21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 MAP2P11137 1827 aaKnown RBP21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 MTHFSP49914 203 aa21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
CDC42BPB-204ENST00000559043 MYBBP1AQ9BQG0 1328 aaKnown RBP21.25■□□□□ 0.99
CDC42BPB-204ENST00000559043 NEFLP07196 543 aa21.25■□□□□ 0.99
CDC42BPB-204ENST00000559043 ARHGEF25Q86VW2 580 aa21.25■□□□□ 0.99
CDC42BPB-204ENST00000559043 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
CDC42BPB-204ENST00000559043 SHPRHQ149N8 1683 aa21.23■□□□□ 0.99
CDC42BPB-204ENST00000559043 FAM9BQ8IZU0 186 aa21.23■□□□□ 0.99
CDC42BPB-204ENST00000559043 NUTM2BA6NNL0 878 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-204ENST00000559043 NUTM2EB1AL46 878 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-204ENST00000559043 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-204ENST00000559043 ZBED9Q6R2W3 1325 aa21.22■□□□□ 0.99
CDC42BPB-204ENST00000559043 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
CDC42BPB-204ENST00000559043 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
CDC42BPB-204ENST00000559043 PEAK1Q9H792 1746 aa21.21■□□□□ 0.99
CDC42BPB-204ENST00000559043 ZBTB7CA1YPR0 619 aa21.21■□□□□ 0.99
CDC42BPB-204ENST00000559043 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-204ENST00000559043 CHRNA2Q15822 529 aa21.21■□□□□ 0.99
CDC42BPB-204ENST00000559043 AXIN2Q9Y2T1 843 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms