RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 DAXXQ9UER7 740 aaPredicted RBP15.3■□□□□ 0.04
HMG20A-206ENST00000558845 PROSER2Q86WR7 435 aaPredicted RBP15.29■□□□□ 0.04
HMG20A-206ENST00000558845 NSD3Q9BZ95 1437 aa15.28■□□□□ 0.04
HMG20A-206ENST00000558845 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
HMG20A-206ENST00000558845 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
HMG20A-206ENST00000558845 CABP1Q9NZU7 370 aa15.28■□□□□ 0.04
HMG20A-206ENST00000558845 POLR3AO14802 1390 aaPredicted RBP15.27■□□□□ 0.04
HMG20A-206ENST00000558845 TMEM94Q12767 1356 aa15.27■□□□□ 0.04
HMG20A-206ENST00000558845 AKAP12Q02952 1782 aa15.27■□□□□ 0.04
HMG20A-206ENST00000558845 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
HMG20A-206ENST00000558845 C19orf44Q9H6X5 657 aa15.27■□□□□ 0.04
HMG20A-206ENST00000558845 MON2Q7Z3U7 1717 aa15.26■□□□□ 0.03
HMG20A-206ENST00000558845 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
HMG20A-206ENST00000558845 EDC4Q6P2E9 1401 aaKnown RBP15.26■□□□□ 0.03
HMG20A-206ENST00000558845 CGNL1Q0VF96 1302 aa15.25■□□□□ 0.03
HMG20A-206ENST00000558845 BRD4O60885 1362 aaPredicted RBP15.24■□□□□ 0.03
HMG20A-206ENST00000558845 MYBBP1AQ9BQG0 1328 aaKnown RBP15.24■□□□□ 0.03
HMG20A-206ENST00000558845 ZNF335Q9H4Z2 1342 aaPredicted RBP15.23■□□□□ 0.03
HMG20A-206ENST00000558845 SSH2Q76I76 1423 aa15.23■□□□□ 0.03
HMG20A-206ENST00000558845 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
HMG20A-206ENST00000558845 XIRP1Q702N8 1843 aaKnown RBP15.22■□□□□ 0.03
HMG20A-206ENST00000558845 USP6P35125 1406 aa15.22■□□□□ 0.03
HMG20A-206ENST00000558845 MSH6P52701 1360 aa15.21■□□□□ 0.02
HMG20A-206ENST00000558845 ANKRD26Q9UPS8 1709 aa15.2■□□□□ 0.02
HMG20A-206ENST00000558845 ACEP12821 1306 aa15.2■□□□□ 0.02
HMG20A-206ENST00000558845 MST1RQ04912 1400 aa15.2■□□□□ 0.02
HMG20A-206ENST00000558845 C14orf37Q86TY3 774 aa15.2■□□□□ 0.02
HMG20A-206ENST00000558845 CADPS2Q86UW7 1296 aa15.2■□□□□ 0.02
HMG20A-206ENST00000558845 RGPD8O14715 1765 aaPredicted RBP15.2■□□□□ 0.02
HMG20A-206ENST00000558845 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
HMG20A-206ENST00000558845 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
HMG20A-206ENST00000558845 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
HMG20A-206ENST00000558845 NLRP13Q86W25 1043 aa15.19■□□□□ 0.02
HMG20A-206ENST00000558845 TTC21AQ8NDW8 1320 aa15.18■□□□□ 0.02
HMG20A-206ENST00000558845 LTBP4Q8N2S1 1624 aa15.18■□□□□ 0.02
HMG20A-206ENST00000558845 KIF20BQ96Q89 1820 aa15.18■□□□□ 0.02
HMG20A-206ENST00000558845 FYB1O15117 783 aa15.18■□□□□ 0.02
HMG20A-206ENST00000558845 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
HMG20A-206ENST00000558845 ATF3P18847 181 aa15.17■□□□□ 0.02
HMG20A-206ENST00000558845 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
HMG20A-206ENST00000558845 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
HMG20A-206ENST00000558845 NUTM2FA1L443 756 aa15.15■□□□□ 0.02
HMG20A-206ENST00000558845 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
HMG20A-206ENST00000558845 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
HMG20A-206ENST00000558845 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
HMG20A-206ENST00000558845 NGDNQ8NEJ9 315 aaKnown RBP15.15■□□□□ 0.02
HMG20A-206ENST00000558845 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
HMG20A-206ENST00000558845 USP31Q70CQ4 1352 aa15.14■□□□□ 0.01
HMG20A-206ENST00000558845 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
HMG20A-206ENST00000558845 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
HMG20A-206ENST00000558845 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
HMG20A-206ENST00000558845 MORC1Q86VD1 984 aa15.13■□□□□ 0.01
HMG20A-206ENST00000558845 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
HMG20A-206ENST00000558845 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
HMG20A-206ENST00000558845 INSRP06213 1382 aa15.12■□□□□ 0.01
HMG20A-206ENST00000558845 ESCO1Q5FWF5 840 aa15.12■□□□□ 0.01
HMG20A-206ENST00000558845 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
HMG20A-206ENST00000558845 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
HMG20A-206ENST00000558845 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
HMG20A-206ENST00000558845 GGNBP2Q9H3C7 697 aa15.1■□□□□ 0.01
HMG20A-206ENST00000558845 SMG6Q86US8 1419 aaKnown RBP15.09■□□□□ 0.01
HMG20A-206ENST00000558845 NME9Q86XW9 330 aa15.09■□□□□ 0.01
HMG20A-206ENST00000558845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.09■□□□□ 0.01
HMG20A-206ENST00000558845 PIK3C2AO00443 1686 aa15.09■□□□□ 0.01
HMG20A-206ENST00000558845 TRPM3Q9HCF6 1732 aaPredicted RBP15.09■□□□□ 0.01
HMG20A-206ENST00000558845 IQSEC2Q5JU85 1478 aa15.08■□□□□ 0.01
HMG20A-206ENST00000558845 HAX1O00165 279 aa15.08■□□□□ 0
HMG20A-206ENST00000558845 PNISRQ8TF01 805 aaKnown RBP15.08■□□□□ 0
HMG20A-206ENST00000558845 COG3Q96JB2 828 aa15.08■□□□□ 0
HMG20A-206ENST00000558845 CNGB1Q14028 1251 aaPredicted RBP15.07■□□□□ 0
HMG20A-206ENST00000558845 NPHP3Q7Z494 1330 aa15.07■□□□□ 0
HMG20A-206ENST00000558845 SBNO1A3KN83 1393 aa15.07■□□□□ 0
HMG20A-206ENST00000558845 SLAIN2Q9P270 581 aa15.06■□□□□ 0
HMG20A-206ENST00000558845 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
HMG20A-206ENST00000558845 PSME1Q06323 249 aa15.05■□□□□ -0
HMG20A-206ENST00000558845 MARF1Q9Y4F3 1742 aaKnown RBP15.04■□□□□ -0
HMG20A-206ENST00000558845 PXDNQ92626 1479 aa15.04■□□□□ -0
HMG20A-206ENST00000558845 FOXO3O43524 673 aa15.04■□□□□ -0
HMG20A-206ENST00000558845 BRINP3Q76B58 766 aa15.04■□□□□ -0
HMG20A-206ENST00000558845 ALS2Q96Q42 1657 aa15.03■□□□□ -0
HMG20A-206ENST00000558845 CDK12Q9NYV4 1490 aaPredicted RBP15.03■□□□□ -0
HMG20A-206ENST00000558845 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
HMG20A-206ENST00000558845 MTHFSP49914 203 aa15.03■□□□□ -0
HMG20A-206ENST00000558845 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
HMG20A-206ENST00000558845 COL3A1P02461 1466 aaPredicted RBP15.02■□□□□ -0
HMG20A-206ENST00000558845 KRT28Q7Z3Y7 464 aa15.02■□□□□ -0
HMG20A-206ENST00000558845 CFAP53Q96M91 514 aa15.02■□□□□ -0
HMG20A-206ENST00000558845 SLIT3O75094 1523 aa15.02□□□□□ -0.01
HMG20A-206ENST00000558845 POLKQ9UBT6 870 aa15.01□□□□□ -0.01
HMG20A-206ENST00000558845 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
HMG20A-206ENST00000558845 NHSL1Q5SYE7 1610 aa15.01□□□□□ -0.01
HMG20A-206ENST00000558845 USP19O94966 1318 aa15□□□□□ -0.01
HMG20A-206ENST00000558845 SOS2Q07890 1332 aaPredicted RBP15□□□□□ -0.01
HMG20A-206ENST00000558845 NLRP6P59044 892 aa15□□□□□ -0.01
HMG20A-206ENST00000558845 ABTB2Q8N961 1025 aa15□□□□□ -0.01
HMG20A-206ENST00000558845 TNS3Q68CZ2 1445 aa15□□□□□ -0.01
HMG20A-206ENST00000558845 MED1Q15648 1581 aaPredicted RBP14.99□□□□□ -0.01
HMG20A-206ENST00000558845 TNNT2P45379 298 aaPredicted RBP14.99□□□□□ -0.01
HMG20A-206ENST00000558845 SHPRHQ149N8 1683 aa14.99□□□□□ -0.01
HMG20A-206ENST00000558845 BLMP54132 1417 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms