RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 TRPM3Q9HCF6 1732 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-205ENST00000558745 AFF2P51816 1311 aa19.46■□□□□ 0.71
TSPAN3-205ENST00000558745 SLC12A5Q9H2X9 1139 aa19.46■□□□□ 0.71
TSPAN3-205ENST00000558745 HAP1P54257 671 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-205ENST00000558745 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
TSPAN3-205ENST00000558745 RXRBP28702 533 aa19.42■□□□□ 0.7
TSPAN3-205ENST00000558745 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
TSPAN3-205ENST00000558745 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
TSPAN3-205ENST00000558745 ALS2Q96Q42 1657 aa19.41■□□□□ 0.7
TSPAN3-205ENST00000558745 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-205ENST00000558745 TMF1P82094 1093 aa19.4■□□□□ 0.7
TSPAN3-205ENST00000558745 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
TSPAN3-205ENST00000558745 FAM83GA6ND36 823 aa19.39■□□□□ 0.69
TSPAN3-205ENST00000558745 QTRT2Q9H974 415 aaKnown RBP19.39■□□□□ 0.69
TSPAN3-205ENST00000558745 USP21Q9UK80 565 aa19.39■□□□□ 0.69
TSPAN3-205ENST00000558745 USP6P35125 1406 aa19.39■□□□□ 0.69
TSPAN3-205ENST00000558745 FNBP4Q8N3X1 1017 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-205ENST00000558745 ZNF692Q9BU19 519 aaPredicted RBP19.38■□□□□ 0.69
TSPAN3-205ENST00000558745 TTC21BQ7Z4L5 1316 aa19.37■□□□□ 0.69
TSPAN3-205ENST00000558745 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
TSPAN3-205ENST00000558745 PUS7Q96PZ0 661 aaKnown RBP19.37■□□□□ 0.69
TSPAN3-205ENST00000558745 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 CPSF1Q10570 1443 aaKnown RBP19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 KTN1Q86UP2 1357 aaKnown RBP19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 ZC3H6P61129 1189 aaKnown RBP19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 ZRANB1Q9UGI0 708 aa19.36■□□□□ 0.69
TSPAN3-205ENST00000558745 NLRP6P59044 892 aa19.35■□□□□ 0.69
TSPAN3-205ENST00000558745 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
TSPAN3-205ENST00000558745 NLRP13Q86W25 1043 aa19.34■□□□□ 0.69
TSPAN3-205ENST00000558745 ABCA3Q99758 1704 aa19.34■□□□□ 0.69
TSPAN3-205ENST00000558745 CHRNA2Q15822 529 aa19.33■□□□□ 0.69
TSPAN3-205ENST00000558745 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.69
TSPAN3-205ENST00000558745 POLR3GLQ9BT43 218 aa19.33■□□□□ 0.69
TSPAN3-205ENST00000558745 MARF1Q9Y4F3 1742 aaKnown RBP19.33■□□□□ 0.69
TSPAN3-205ENST00000558745 BCL9LQ86UU0 1499 aa19.33■□□□□ 0.69
TSPAN3-205ENST00000558745 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
TSPAN3-205ENST00000558745 GCP02774 474 aa19.31■□□□□ 0.68
TSPAN3-205ENST00000558745 NME9Q86XW9 330 aa19.31■□□□□ 0.68
TSPAN3-205ENST00000558745 A0A1W2PP64 1363 aa19.31■□□□□ 0.68
TSPAN3-205ENST00000558745 C11orf95C9JLR9 678 aaPredicted RBP19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 SOX12O15370 315 aa19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 UNC5CLQ8IV45 518 aa19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 TERF2IPQ9NYB0 399 aa19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 TRPC5Q9UL62 973 aaPredicted RBP19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 CRYBG1Q9Y4K1 1723 aa19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 SLIT2O94813 1529 aa19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 BRD4O60885 1362 aaPredicted RBP19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 KIAA0232Q92628 1395 aa19.3■□□□□ 0.68
TSPAN3-205ENST00000558745 ZBTB7CA1YPR0 619 aa19.29■□□□□ 0.68
TSPAN3-205ENST00000558745 PRDM11Q9NQV5 511 aa19.29■□□□□ 0.68
TSPAN3-205ENST00000558745 BTG4Q9NY30 223 aa19.29■□□□□ 0.68
TSPAN3-205ENST00000558745 USP19O94966 1318 aa19.29■□□□□ 0.68
TSPAN3-205ENST00000558745 RBM6P78332 1123 aaKnown RBP19.28■□□□□ 0.68
TSPAN3-205ENST00000558745 TTC21AQ8NDW8 1320 aa19.28■□□□□ 0.68
TSPAN3-205ENST00000558745 CDCA8Q53HL2 280 aa19.27■□□□□ 0.68
TSPAN3-205ENST00000558745 PIK3C2AO00443 1686 aa19.27■□□□□ 0.68
TSPAN3-205ENST00000558745 ATRNO75882 1429 aa19.27■□□□□ 0.68
TSPAN3-205ENST00000558745 PHRF1Q9P1Y6 1649 aaKnown RBP19.27■□□□□ 0.68
TSPAN3-205ENST00000558745 MON2Q7Z3U7 1717 aa19.26■□□□□ 0.67
TSPAN3-205ENST00000558745 GJD4Q96KN9 370 aaPredicted RBP19.25■□□□□ 0.67
TSPAN3-205ENST00000558745 CCDC9Q9Y3X0 531 aaKnown RBP19.25■□□□□ 0.67
TSPAN3-205ENST00000558745 NRKQ7Z2Y5 1582 aa19.24■□□□□ 0.67
TSPAN3-205ENST00000558745 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
TSPAN3-205ENST00000558745 CARD14Q9BXL6 1004 aa19.24■□□□□ 0.67
TSPAN3-205ENST00000558745 PLCH1Q4KWH8 1693 aa19.23■□□□□ 0.67
TSPAN3-205ENST00000558745 ANKRD36BQ8N2N9 1353 aa19.23■□□□□ 0.67
TSPAN3-205ENST00000558745 STRN4Q9NRL3 753 aa19.23■□□□□ 0.67
TSPAN3-205ENST00000558745 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
TSPAN3-205ENST00000558745 FBLN1P23142 703 aa19.22■□□□□ 0.67
TSPAN3-205ENST00000558745 VPS72Q15906 364 aa19.22■□□□□ 0.67
TSPAN3-205ENST00000558745 COL14A1Q05707 1796 aaKnown RBP19.21■□□□□ 0.67
TSPAN3-205ENST00000558745 SLIT3O75094 1523 aa19.2■□□□□ 0.66
TSPAN3-205ENST00000558745 USP31Q70CQ4 1352 aa19.2■□□□□ 0.66
TSPAN3-205ENST00000558745 CPDO75976 1380 aa19.19■□□□□ 0.66
TSPAN3-205ENST00000558745 RGS12O14924 1447 aa19.19■□□□□ 0.66
TSPAN3-205ENST00000558745 EVA1CP58658 441 aa19.19■□□□□ 0.66
TSPAN3-205ENST00000558745 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
TSPAN3-205ENST00000558745 AXIN2Q9Y2T1 843 aa19.19■□□□□ 0.66
TSPAN3-205ENST00000558745 CAMTA1Q9Y6Y1 1673 aa19.18■□□□□ 0.66
TSPAN3-205ENST00000558745 FYB1O15117 783 aa19.18■□□□□ 0.66
TSPAN3-205ENST00000558745 ARHGEF25Q86VW2 580 aa19.18■□□□□ 0.66
TSPAN3-205ENST00000558745 KCNH5Q8NCM2 988 aa19.18■□□□□ 0.66
TSPAN3-205ENST00000558745 MYOM1P52179 1685 aa19.18■□□□□ 0.66
TSPAN3-205ENST00000558745 NWD2Q9ULI1 1742 aa19.18■□□□□ 0.66
TSPAN3-205ENST00000558745 GLI3P10071 1580 aa19.17■□□□□ 0.66
TSPAN3-205ENST00000558745 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-205ENST00000558745 NRAPQ86VF7 1730 aa19.16■□□□□ 0.66
TSPAN3-205ENST00000558745 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-205ENST00000558745 USP35Q9P2H5 1018 aa19.16■□□□□ 0.66
TSPAN3-205ENST00000558745 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-205ENST00000558745 COG3Q96JB2 828 aa19.15■□□□□ 0.66
TSPAN3-205ENST00000558745 PANK3Q9H999 370 aa19.15■□□□□ 0.66
TSPAN3-205ENST00000558745 KIF7Q2M1P5 1343 aa19.15■□□□□ 0.66
TSPAN3-205ENST00000558745 SPATA31A5Q5VU36 1347 aa19.14■□□□□ 0.65
TSPAN3-205ENST00000558745 SPATA31A7Q8IWB4 1347 aa19.14■□□□□ 0.65
TSPAN3-205ENST00000558745 NSD3Q9BZ95 1437 aa19.14■□□□□ 0.65
TSPAN3-205ENST00000558745 OVOS2A0A0J9YW53 1432 aa19.13■□□□□ 0.65
TSPAN3-205ENST00000558745 OVOS2Q6IE36 1432 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms