RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 XPCQ01831 940 aaPredicted RBP20■□□□□ 0.79
HMBOX1-212ENST00000558662 NUCB1Q02818 461 aa20■□□□□ 0.79
HMBOX1-212ENST00000558662 KIAA2012Q0VF49 1180 aa20■□□□□ 0.79
HMBOX1-212ENST00000558662 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
HMBOX1-212ENST00000558662 RGL3Q3MIN7 710 aa20■□□□□ 0.79
HMBOX1-212ENST00000558662 CLTCL1P53675 1640 aa19.99■□□□□ 0.79
HMBOX1-212ENST00000558662 LRSAM1Q6UWE0 723 aa19.98■□□□□ 0.79
HMBOX1-212ENST00000558662 KIF2CQ99661 725 aa19.98■□□□□ 0.79
HMBOX1-212ENST00000558662 UHRF1BP1LA0JNW5 1464 aa19.98■□□□□ 0.79
HMBOX1-212ENST00000558662 CYP2E1P05181 493 aaPredicted RBP19.98■□□□□ 0.79
HMBOX1-212ENST00000558662 SSFA2P28290 1259 aa19.98■□□□□ 0.79
HMBOX1-212ENST00000558662 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
HMBOX1-212ENST00000558662 RABEP1Q15276 862 aa19.97■□□□□ 0.79
HMBOX1-212ENST00000558662 RBSNQ9H1K0 784 aa19.97■□□□□ 0.79
HMBOX1-212ENST00000558662 LMBRD1Q9NUN5 540 aa19.97■□□□□ 0.79
HMBOX1-212ENST00000558662 ABCA8O94911 1581 aa19.97■□□□□ 0.79
HMBOX1-212ENST00000558662 MBD3O95983 291 aa19.96■□□□□ 0.79
HMBOX1-212ENST00000558662 PDE4CQ08493 712 aa19.96■□□□□ 0.79
HMBOX1-212ENST00000558662 PREX2Q70Z35 1606 aa19.96■□□□□ 0.79
HMBOX1-212ENST00000558662 ADGRB2O60241 1585 aa19.96■□□□□ 0.79
HMBOX1-212ENST00000558662 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
HMBOX1-212ENST00000558662 PPP4R3BQ5MIZ7 849 aa19.95■□□□□ 0.78
HMBOX1-212ENST00000558662 CAVIN1Q6NZI2 390 aaKnown RBP19.93■□□□□ 0.78
HMBOX1-212ENST00000558662 ZHX1Q9UKY1 873 aaPredicted RBP19.93■□□□□ 0.78
HMBOX1-212ENST00000558662 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
HMBOX1-212ENST00000558662 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
HMBOX1-212ENST00000558662 UVSSAQ2YD98 709 aa19.92■□□□□ 0.78
HMBOX1-212ENST00000558662 TCP11L2Q8N4U5 519 aa19.92■□□□□ 0.78
HMBOX1-212ENST00000558662 GCC1Q96CN9 775 aa19.92■□□□□ 0.78
HMBOX1-212ENST00000558662 SAMD9LQ8IVG5 1584 aa19.92■□□□□ 0.78
HMBOX1-212ENST00000558662 ABCC11Q96J66 1382 aa19.92■□□□□ 0.78
HMBOX1-212ENST00000558662 IPO8O15397 1037 aaKnown RBP19.91■□□□□ 0.78
HMBOX1-212ENST00000558662 CHD1LQ86WJ1 897 aa19.91■□□□□ 0.78
HMBOX1-212ENST00000558662 PRIM1P49642 420 aaKnown RBP19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 PLB1Q6P1J6 1458 aa19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 MCTP1Q6DN14 999 aa19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 SYAP1Q96A49 352 aaPredicted RBP19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 ZBTB40Q9NUA8 1239 aa19.9■□□□□ 0.78
HMBOX1-212ENST00000558662 IL16Q14005 1332 aa19.89■□□□□ 0.78
HMBOX1-212ENST00000558662 PIBF1Q8WXW3 757 aa19.89■□□□□ 0.77
HMBOX1-212ENST00000558662 FEZ1Q99689 392 aa19.89■□□□□ 0.77
HMBOX1-212ENST00000558662 TRPM2O94759 1503 aa19.88■□□□□ 0.77
HMBOX1-212ENST00000558662 KIF3AQ9Y496 699 aa19.88■□□□□ 0.77
HMBOX1-212ENST00000558662 PHF14O94880 888 aa19.88■□□□□ 0.77
HMBOX1-212ENST00000558662 CFAP53Q96M91 514 aa19.88■□□□□ 0.77
HMBOX1-212ENST00000558662 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
HMBOX1-212ENST00000558662 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
HMBOX1-212ENST00000558662 ZNF518AQ6AHZ1 1483 aa19.87■□□□□ 0.77
HMBOX1-212ENST00000558662 ERVK-7P63135 1459 aa19.86■□□□□ 0.77
HMBOX1-212ENST00000558662 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
HMBOX1-212ENST00000558662 TNNQ9UQP3 1299 aa19.86■□□□□ 0.77
HMBOX1-212ENST00000558662 CDC45O75419 566 aa19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 PTMAP06454 111 aaKnown RBP19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 TRIM27P14373 513 aa19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 BBXQ8WY36 941 aaPredicted RBP19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 DIAPH3Q9NSV4 1193 aa19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 SPTLC3Q9NUV7 552 aa19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 NOS1P29475 1434 aa19.85■□□□□ 0.77
HMBOX1-212ENST00000558662 MED14O60244 1454 aa19.84■□□□□ 0.77
HMBOX1-212ENST00000558662 TPM3P06753 285 aa19.84■□□□□ 0.77
HMBOX1-212ENST00000558662 ITPRIPQ8IWB1 547 aa19.84■□□□□ 0.77
HMBOX1-212ENST00000558662 SMC4Q9NTJ3 1288 aa19.84■□□□□ 0.77
HMBOX1-212ENST00000558662 BRPF1P55201 1214 aaPredicted RBP19.83■□□□□ 0.77
HMBOX1-212ENST00000558662 SYCP1Q15431 976 aa19.83■□□□□ 0.77
HMBOX1-212ENST00000558662 PPRC1Q5VV67 1664 aaKnown RBP19.83■□□□□ 0.77
HMBOX1-212ENST00000558662 CD2BP2O95400 341 aaKnown RBP19.83■□□□□ 0.76
HMBOX1-212ENST00000558662 ALDH1L2Q3SY69 923 aa19.83■□□□□ 0.76
HMBOX1-212ENST00000558662 DNTTIP2Q5QJE6 756 aaKnown RBP19.83■□□□□ 0.76
HMBOX1-212ENST00000558662 TBC1D9Q6ZT07 1266 aa19.83■□□□□ 0.76
HMBOX1-212ENST00000558662 MYOM2P54296 1465 aa19.82■□□□□ 0.76
HMBOX1-212ENST00000558662 FAM193AP78312 1265 aa19.82■□□□□ 0.76
HMBOX1-212ENST00000558662 GABPB1Q06547 395 aaPredicted RBP19.82■□□□□ 0.76
HMBOX1-212ENST00000558662 ZNF710Q8N1W2 664 aa19.82■□□□□ 0.76
HMBOX1-212ENST00000558662 TSPY26PQ9H489 355 aa19.82■□□□□ 0.76
HMBOX1-212ENST00000558662 NSD2O96028 1365 aa19.82■□□□□ 0.76
HMBOX1-212ENST00000558662 ATP10BO94823 1461 aa19.81■□□□□ 0.76
HMBOX1-212ENST00000558662 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
HMBOX1-212ENST00000558662 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.769e-9■■■■■ 30.5
HMBOX1-212ENST00000558662 FKBP5Q13451 457 aaPredicted RBP19.81■□□□□ 0.76
HMBOX1-212ENST00000558662 PDCL2Q8N4E4 241 aa19.81■□□□□ 0.76
HMBOX1-212ENST00000558662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.81■□□□□ 0.76
HMBOX1-212ENST00000558662 AK9Q5TCS8 1911 aa19.81■□□□□ 0.76
HMBOX1-212ENST00000558662 ST18O60284 1047 aa19.8■□□□□ 0.76
HMBOX1-212ENST00000558662 NOLC1Q14978 699 aaKnown RBP eCLIP19.8■□□□□ 0.76
HMBOX1-212ENST00000558662 BCL2L13Q9BXK5 485 aa19.8■□□□□ 0.76
HMBOX1-212ENST00000558662 CHAF1AQ13111 956 aaPredicted RBP19.8■□□□□ 0.76
HMBOX1-212ENST00000558662 GPT2Q8TD30 523 aa19.8■□□□□ 0.76
HMBOX1-212ENST00000558662 PTPRTO14522 1441 aa19.8■□□□□ 0.76
HMBOX1-212ENST00000558662 CARD14Q9BXL6 1004 aa19.79■□□□□ 0.76
HMBOX1-212ENST00000558662 MORC1Q86VD1 984 aa19.78■□□□□ 0.76
HMBOX1-212ENST00000558662 IPO4Q8TEX9 1081 aaKnown RBP19.78■□□□□ 0.76
HMBOX1-212ENST00000558662 PRPF40AO75400 957 aaKnown RBP19.78■□□□□ 0.76
HMBOX1-212ENST00000558662 ANKRD7Q92527 254 aa19.78■□□□□ 0.76
HMBOX1-212ENST00000558662 LNPKQ9C0E8 428 aa19.78■□□□□ 0.76
HMBOX1-212ENST00000558662 CBX1P83916 185 aa19.77■□□□□ 0.76
HMBOX1-212ENST00000558662 OGFRQ9NZT2 677 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms