RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 RTEL1-TNFRSF6BF6WH68 1400 aa19.15■□□□□ 0.66
AP4E1-202ENST00000558439 MCCP23508 829 aa19.15■□□□□ 0.66
AP4E1-202ENST00000558439 WDR7Q9Y4E6 1490 aa19.15■□□□□ 0.66
AP4E1-202ENST00000558439 TTC37Q6PGP7 1564 aa19.15■□□□□ 0.66
AP4E1-202ENST00000558439 TSPYL4Q9UJ04 414 aa19.15■□□□□ 0.66
AP4E1-202ENST00000558439 KDM5DQ9BY66 1539 aa19.15■□□□□ 0.66
AP4E1-202ENST00000558439 TRAK2O60296 914 aa19.14■□□□□ 0.66
AP4E1-202ENST00000558439 NFE2L2Q16236 605 aa19.14■□□□□ 0.66
AP4E1-202ENST00000558439 EIF2S2P20042 333 aaKnown RBP19.14■□□□□ 0.65
AP4E1-202ENST00000558439 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.65
AP4E1-202ENST00000558439 FKBP5Q13451 457 aaPredicted RBP19.14■□□□□ 0.65
AP4E1-202ENST00000558439 CFAP44Q96MT7 982 aa19.14■□□□□ 0.65
AP4E1-202ENST00000558439 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
AP4E1-202ENST00000558439 MIS18AQ9NYP9 233 aa19.13■□□□□ 0.65
AP4E1-202ENST00000558439 ANO8Q9HCE9 1232 aaPredicted RBP19.13■□□□□ 0.65
AP4E1-202ENST00000558439 FAM83GA6ND36 823 aa19.12■□□□□ 0.65
AP4E1-202ENST00000558439 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
AP4E1-202ENST00000558439 ST18O60284 1047 aa19.12■□□□□ 0.65
AP4E1-202ENST00000558439 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
AP4E1-202ENST00000558439 ATP10AO60312 1499 aa19.11■□□□□ 0.65
AP4E1-202ENST00000558439 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
AP4E1-202ENST00000558439 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
AP4E1-202ENST00000558439 MCM10Q7L590 875 aa19.1■□□□□ 0.65
AP4E1-202ENST00000558439 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
AP4E1-202ENST00000558439 ANKRD36BQ8N2N9 1353 aa19.1■□□□□ 0.65
AP4E1-202ENST00000558439 CDC45O75419 566 aa19.1■□□□□ 0.65
AP4E1-202ENST00000558439 CCDC61Q9Y6R9 512 aa19.09■□□□□ 0.65
AP4E1-202ENST00000558439 NPC1L1Q9UHC9 1359 aa19.09■□□□□ 0.65
AP4E1-202ENST00000558439 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
AP4E1-202ENST00000558439 ERCC6L2Q5T890 1561 aa19.09■□□□□ 0.65
AP4E1-202ENST00000558439 UGGT1Q9NYU2 1555 aa19.09■□□□□ 0.65
AP4E1-202ENST00000558439 TBC1D32Q96NH3 1257 aa19.09■□□□□ 0.65
AP4E1-202ENST00000558439 MCM4P33991 863 aa19.08■□□□□ 0.65
AP4E1-202ENST00000558439 NLRP6P59044 892 aa19.08■□□□□ 0.65
AP4E1-202ENST00000558439 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.65
AP4E1-202ENST00000558439 DNTTIP2Q5QJE6 756 aaKnown RBP19.07■□□□□ 0.64
AP4E1-202ENST00000558439 TAOK2Q9UL54 1235 aa19.07■□□□□ 0.64
AP4E1-202ENST00000558439 CCDC27Q2M243 656 aa19.06■□□□□ 0.64
AP4E1-202ENST00000558439 A0A0G2JS52 829 aa19.06■□□□□ 0.64
AP4E1-202ENST00000558439 MSNP26038 577 aaKnown RBP19.06■□□□□ 0.64
AP4E1-202ENST00000558439 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
AP4E1-202ENST00000558439 ANO2Q9NQ90 1003 aa19.05■□□□□ 0.64
AP4E1-202ENST00000558439 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
AP4E1-202ENST00000558439 PTPRTO14522 1441 aa19.05■□□□□ 0.64
AP4E1-202ENST00000558439 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
AP4E1-202ENST00000558439 ATP7AQ04656 1500 aa19.05■□□□□ 0.64
AP4E1-202ENST00000558439 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
AP4E1-202ENST00000558439 TRMT2AQ8IZ69 625 aaKnown RBP19.04■□□□□ 0.64
AP4E1-202ENST00000558439 MCTP1Q6DN14 999 aa19.04■□□□□ 0.64
AP4E1-202ENST00000558439 TSPYL6Q8N831 410 aa19.04■□□□□ 0.64
AP4E1-202ENST00000558439 ZNF518AQ6AHZ1 1483 aa19.04■□□□□ 0.64
AP4E1-202ENST00000558439 REC8O95072 547 aa19.04■□□□□ 0.64
AP4E1-202ENST00000558439 PREX2Q70Z35 1606 aa19.04■□□□□ 0.64
AP4E1-202ENST00000558439 MBIPQ9NS73 344 aa19.03■□□□□ 0.64
AP4E1-202ENST00000558439 POLKQ9UBT6 870 aa19.03■□□□□ 0.64
AP4E1-202ENST00000558439 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
AP4E1-202ENST00000558439 ADCY10Q96PN6 1610 aa19.03■□□□□ 0.64
AP4E1-202ENST00000558439 INSRP06213 1382 aa19.03■□□□□ 0.64
AP4E1-202ENST00000558439 ALDH1L2Q3SY69 923 aa19.03■□□□□ 0.64
AP4E1-202ENST00000558439 PRDM15P57071 1507 aaPredicted RBP19.02■□□□□ 0.64
AP4E1-202ENST00000558439 WASLO00401 505 aaPredicted RBP19.02■□□□□ 0.64
AP4E1-202ENST00000558439 NSD2O96028 1365 aa19.02■□□□□ 0.64
AP4E1-202ENST00000558439 ABCC11Q96J66 1382 aa19.02■□□□□ 0.64
AP4E1-202ENST00000558439 ZNF428Q96B54 188 aa19.02■□□□□ 0.63
AP4E1-202ENST00000558439 PTMSP20962 102 aa19.01■□□□□ 0.63
AP4E1-202ENST00000558439 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
AP4E1-202ENST00000558439 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
AP4E1-202ENST00000558439 ERVK-7P63135 1459 aa19.01■□□□□ 0.63
AP4E1-202ENST00000558439 FGD1P98174 961 aa19■□□□□ 0.63
AP4E1-202ENST00000558439 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
AP4E1-202ENST00000558439 NAP1L2Q9ULW6 460 aaPredicted RBP19■□□□□ 0.63
AP4E1-202ENST00000558439 SKOR2Q2VWA4 1001 aaPredicted RBP19■□□□□ 0.63
AP4E1-202ENST00000558439 GLIPR1L2Q4G1C9 344 aa19■□□□□ 0.63
AP4E1-202ENST00000558439 F6X3S4 739 aa18.99■□□□□ 0.63
AP4E1-202ENST00000558439 TEFQ10587 303 aa18.99■□□□□ 0.63
AP4E1-202ENST00000558439 C8orf58Q8NAV2 365 aa18.99■□□□□ 0.63
AP4E1-202ENST00000558439 IFT57Q9NWB7 429 aa18.99■□□□□ 0.63
AP4E1-202ENST00000558439 HDAC1Q13547 482 aaPredicted RBP18.98■□□□□ 0.63
AP4E1-202ENST00000558439 TRPM1Q7Z4N2 1603 aa18.98■□□□□ 0.63
AP4E1-202ENST00000558439 KRT24Q2M2I5 525 aa18.98■□□□□ 0.63
AP4E1-202ENST00000558439 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
AP4E1-202ENST00000558439 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
AP4E1-202ENST00000558439 K7ELQ4 463 aaPredicted RBP18.97■□□□□ 0.63
AP4E1-202ENST00000558439 NEK4P51957 841 aa18.97■□□□□ 0.63
AP4E1-202ENST00000558439 EXOC6BQ9Y2D4 811 aa18.97■□□□□ 0.63
AP4E1-202ENST00000558439 NPATQ14207 1427 aa18.97■□□□□ 0.63
AP4E1-202ENST00000558439 ABTB2Q8N961 1025 aa18.96■□□□□ 0.63
AP4E1-202ENST00000558439 MRE11P49959 708 aa18.96■□□□□ 0.63
AP4E1-202ENST00000558439 ZBTB40Q9NUA8 1239 aa18.96■□□□□ 0.63
AP4E1-202ENST00000558439 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
AP4E1-202ENST00000558439 CSB-PGBD3P0DP91 1061 aa18.95■□□□□ 0.62
AP4E1-202ENST00000558439 NUCB1Q02818 461 aa18.95■□□□□ 0.62
AP4E1-202ENST00000558439 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
AP4E1-202ENST00000558439 CCDC9Q9Y3X0 531 aaKnown RBP18.95■□□□□ 0.62
AP4E1-202ENST00000558439 IL16Q14005 1332 aa18.95■□□□□ 0.62
AP4E1-202ENST00000558439 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
AP4E1-202ENST00000558439 VAMP4O75379 141 aa18.94■□□□□ 0.62
AP4E1-202ENST00000558439 CEBPAP49715 358 aaPredicted RBP18.94■□□□□ 0.62
AP4E1-202ENST00000558439 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
AP4E1-202ENST00000558439 CAVIN1Q6NZI2 390 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms