RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 SPATA31A3Q5VYP0 1347 aa14.45□□□□□ -0.1
LRRC28-204ENST00000558172 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
LRRC28-204ENST00000558172 SHPRHQ149N8 1683 aa14.45□□□□□ -0.1
LRRC28-204ENST00000558172 TTC21AQ8NDW8 1320 aa14.44□□□□□ -0.1
LRRC28-204ENST00000558172 NRKQ7Z2Y5 1582 aa14.44□□□□□ -0.1
LRRC28-204ENST00000558172 TNS3Q68CZ2 1445 aa14.44□□□□□ -0.1
LRRC28-204ENST00000558172 EDC4Q6P2E9 1401 aaKnown RBP14.44□□□□□ -0.1
LRRC28-204ENST00000558172 SSH2Q76I76 1423 aa14.44□□□□□ -0.1
LRRC28-204ENST00000558172 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
LRRC28-204ENST00000558172 ARHGEF10O15013 1369 aa14.44□□□□□ -0.1
LRRC28-204ENST00000558172 JCADQ9P266 1359 aa14.44□□□□□ -0.1
LRRC28-204ENST00000558172 TTC21BQ7Z4L5 1316 aa14.43□□□□□ -0.1
LRRC28-204ENST00000558172 COL22A1Q8NFW1 1626 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-204ENST00000558172 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-204ENST00000558172 PANK3Q9H999 370 aa14.42□□□□□ -0.1
LRRC28-204ENST00000558172 LMOD2Q6P5Q4 547 aa14.41□□□□□ -0.1
LRRC28-204ENST00000558172 ABTB2Q8N961 1025 aa14.41□□□□□ -0.1
LRRC28-204ENST00000558172 KIF20BQ96Q89 1820 aa14.41□□□□□ -0.1
LRRC28-204ENST00000558172 PNPLA6Q8IY17 1366 aa14.4□□□□□ -0.1
LRRC28-204ENST00000558172 CARD14Q9BXL6 1004 aa14.4□□□□□ -0.1
LRRC28-204ENST00000558172 PIK3C2AO00443 1686 aa14.39□□□□□ -0.11
LRRC28-204ENST00000558172 NLRP13Q86W25 1043 aa14.39□□□□□ -0.11
LRRC28-204ENST00000558172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.39□□□□□ -0.11
LRRC28-204ENST00000558172 NSD3Q9BZ95 1437 aa14.39□□□□□ -0.11
LRRC28-204ENST00000558172 USP54Q70EL1 1684 aa14.39□□□□□ -0.11
LRRC28-204ENST00000558172 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
LRRC28-204ENST00000558172 NLRP6P59044 892 aa14.38□□□□□ -0.11
LRRC28-204ENST00000558172 KNSTRNQ9Y448 316 aa14.38□□□□□ -0.11
LRRC28-204ENST00000558172 USP31Q70CQ4 1352 aa14.37□□□□□ -0.11
LRRC28-204ENST00000558172 MED1Q15648 1581 aaPredicted RBP14.37□□□□□ -0.11
LRRC28-204ENST00000558172 CGNL1Q0VF96 1302 aa14.37□□□□□ -0.11
LRRC28-204ENST00000558172 CRYBG1Q9Y4K1 1723 aa14.36□□□□□ -0.11
LRRC28-204ENST00000558172 ABCA3Q99758 1704 aa14.35□□□□□ -0.11
LRRC28-204ENST00000558172 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
LRRC28-204ENST00000558172 MARF1Q9Y4F3 1742 aaKnown RBP14.35□□□□□ -0.11
LRRC28-204ENST00000558172 FYB1O15117 783 aa14.35□□□□□ -0.11
LRRC28-204ENST00000558172 PER1O15534 1290 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-204ENST00000558172 NME9Q86XW9 330 aa14.35□□□□□ -0.11
LRRC28-204ENST00000558172 PHRF1Q9P1Y6 1649 aaKnown RBP14.34□□□□□ -0.11
LRRC28-204ENST00000558172 HAP1P54257 671 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-204ENST00000558172 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
LRRC28-204ENST00000558172 NUTM2GQ5VZR2 741 aa14.34□□□□□ -0.11
LRRC28-204ENST00000558172 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
LRRC28-204ENST00000558172 COG3Q96JB2 828 aa14.34□□□□□ -0.11
LRRC28-204ENST00000558172 USP19O94966 1318 aa14.34□□□□□ -0.11
LRRC28-204ENST00000558172 NSD2O96028 1365 aa14.34□□□□□ -0.11
LRRC28-204ENST00000558172 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
LRRC28-204ENST00000558172 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
LRRC28-204ENST00000558172 SLIT3O75094 1523 aa14.32□□□□□ -0.12
LRRC28-204ENST00000558172 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-204ENST00000558172 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-204ENST00000558172 GCP02774 474 aa14.31□□□□□ -0.12
LRRC28-204ENST00000558172 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
LRRC28-204ENST00000558172 CABLES1Q8TDN4 633 aa14.31□□□□□ -0.12
LRRC28-204ENST00000558172 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
LRRC28-204ENST00000558172 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
LRRC28-204ENST00000558172 NPC1L1Q9UHC9 1359 aa14.31□□□□□ -0.12
LRRC28-204ENST00000558172 MAP2P11137 1827 aaKnown RBP14.3□□□□□ -0.12
LRRC28-204ENST00000558172 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
LRRC28-204ENST00000558172 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
LRRC28-204ENST00000558172 LTN1O94822 1766 aa14.28□□□□□ -0.12
LRRC28-204ENST00000558172 LRP6O75581 1613 aa14.27□□□□□ -0.12
LRRC28-204ENST00000558172 CPDO75976 1380 aa14.27□□□□□ -0.12
LRRC28-204ENST00000558172 ADAMTS2O95450 1211 aa14.27□□□□□ -0.13
LRRC28-204ENST00000558172 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.13
LRRC28-204ENST00000558172 MORC1Q86VD1 984 aa14.27□□□□□ -0.13
LRRC28-204ENST00000558172 COL14A1Q05707 1796 aaKnown RBP14.27□□□□□ -0.13
LRRC28-204ENST00000558172 NFAT5O94916 1531 aa14.26□□□□□ -0.13
LRRC28-204ENST00000558172 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
LRRC28-204ENST00000558172 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
LRRC28-204ENST00000558172 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 AATKQ6ZMQ8 1374 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 KIAA0232Q92628 1395 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 SOX12O15370 315 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
LRRC28-204ENST00000558172 FAM83GA6ND36 823 aa14.23□□□□□ -0.13
LRRC28-204ENST00000558172 ABCC6O95255 1503 aa14.23□□□□□ -0.13
LRRC28-204ENST00000558172 COL18A1P39060 1754 aa14.23□□□□□ -0.13
LRRC28-204ENST00000558172 PLCH1Q4KWH8 1693 aa14.23□□□□□ -0.13
LRRC28-204ENST00000558172 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
LRRC28-204ENST00000558172 C8orf37Q96NL8 207 aa14.22□□□□□ -0.13
LRRC28-204ENST00000558172 KIF24Q5T7B8 1368 aa14.22□□□□□ -0.13
LRRC28-204ENST00000558172 FNBP4Q8N3X1 1017 aaPredicted RBP14.21□□□□□ -0.13
LRRC28-204ENST00000558172 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.21□□□□□ -0.14
LRRC28-204ENST00000558172 LMO7Q8WWI1 1683 aa14.2□□□□□ -0.14
LRRC28-204ENST00000558172 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
LRRC28-204ENST00000558172 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
LRRC28-204ENST00000558172 TNNT2P45379 298 aaPredicted RBP14.2□□□□□ -0.14
LRRC28-204ENST00000558172 AMPHP49418 695 aa14.2□□□□□ -0.14
LRRC28-204ENST00000558172 RTL1A6NKG5 1358 aa14.2□□□□□ -0.14
LRRC28-204ENST00000558172 SLIT2O94813 1529 aa14.2□□□□□ -0.14
LRRC28-204ENST00000558172 FBLN1P23142 703 aa14.19□□□□□ -0.14
LRRC28-204ENST00000558172 CNGB1Q14028 1251 aaPredicted RBP14.19□□□□□ -0.14
LRRC28-204ENST00000558172 RRS1Q15050 365 aaKnown RBP14.19□□□□□ -0.14
LRRC28-204ENST00000558172 RALBP1Q15311 655 aa14.19□□□□□ -0.14
LRRC28-204ENST00000558172 CHRNA2Q15822 529 aa14.19□□□□□ -0.14
LRRC28-204ENST00000558172 IP6K1Q92551 441 aa14.19□□□□□ -0.14
LRRC28-204ENST00000558172 POLKQ9UBT6 870 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms