RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 STRCP1A6NGW2 1772 aa27.28■■□□□ 1.96
SNRPA1-205ENST00000558036 SALL2Q9Y467 1007 aaPredicted RBP27.28■■□□□ 1.96
SNRPA1-205ENST00000558036 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
SNRPA1-205ENST00000558036 NRKQ7Z2Y5 1582 aa27.25■■□□□ 1.95
SNRPA1-205ENST00000558036 TMEM94Q12767 1356 aa27.25■■□□□ 1.95
SNRPA1-205ENST00000558036 COG3Q96JB2 828 aa27.25■■□□□ 1.95
SNRPA1-205ENST00000558036 GTF3C3Q9Y5Q9 886 aa27.24■■□□□ 1.95
SNRPA1-205ENST00000558036 ESCO1Q5FWF5 840 aa27.23■■□□□ 1.95
SNRPA1-205ENST00000558036 SSH2Q76I76 1423 aa27.23■■□□□ 1.95
SNRPA1-205ENST00000558036 SCAF1Q9H7N4 1312 aaKnown RBP27.23■■□□□ 1.95
SNRPA1-205ENST00000558036 PHF8Q9UPP1 1060 aa27.23■■□□□ 1.95
SNRPA1-205ENST00000558036 CFAP53Q96M91 514 aa27.22■■□□□ 1.95
SNRPA1-205ENST00000558036 CCDC146Q8IYE0 955 aa27.22■■□□□ 1.95
SNRPA1-205ENST00000558036 C19orf44Q9H6X5 657 aa27.21■■□□□ 1.95
SNRPA1-205ENST00000558036 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.95
SNRPA1-205ENST00000558036 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
SNRPA1-205ENST00000558036 POLKQ9UBT6 870 aa27.19■■□□□ 1.94
SNRPA1-205ENST00000558036 INSRP06213 1382 aa27.19■■□□□ 1.94
SNRPA1-205ENST00000558036 SHPRHQ149N8 1683 aa27.18■■□□□ 1.94
SNRPA1-205ENST00000558036 ZNF335Q9H4Z2 1342 aaPredicted RBP27.18■■□□□ 1.94
SNRPA1-205ENST00000558036 EMILIN1Q9Y6C2 1016 aa27.17■■□□□ 1.94
SNRPA1-205ENST00000558036 RRS1Q15050 365 aaKnown RBP27.16■■□□□ 1.94
SNRPA1-205ENST00000558036 OVOS2A0A0J9YW53 1432 aa27.15■■□□□ 1.94
SNRPA1-205ENST00000558036 OVOS2Q6IE36 1432 aa27.15■■□□□ 1.94
SNRPA1-205ENST00000558036 TTC21AQ8NDW8 1320 aa27.15■■□□□ 1.94
SNRPA1-205ENST00000558036 PAK3O75914 559 aaPredicted RBP27.14■■□□□ 1.94
SNRPA1-205ENST00000558036 SOX12O15370 315 aa27.14■■□□□ 1.93
SNRPA1-205ENST00000558036 COL3A1P02461 1466 aaPredicted RBP27.13■■□□□ 1.93
SNRPA1-205ENST00000558036 ATF3P18847 181 aa27.13■■□□□ 1.93
SNRPA1-205ENST00000558036 NUTM2GQ5VZR2 741 aa27.13■■□□□ 1.93
SNRPA1-205ENST00000558036 FOXO3O43524 673 aa27.11■■□□□ 1.93
SNRPA1-205ENST00000558036 AATKQ6ZMQ8 1374 aa27.11■■□□□ 1.93
SNRPA1-205ENST00000558036 PNPLA6Q8IY17 1366 aa27.11■■□□□ 1.93
SNRPA1-205ENST00000558036 C1orf167Q5SNV9 1468 aa27.1■■□□□ 1.93
SNRPA1-205ENST00000558036 U2AF1L5P0DN76 240 aaPredicted RBP27.1■■□□□ 1.93
SNRPA1-205ENST00000558036 U2AF1Q01081 240 aaKnown RBP eCLIP27.1■■□□□ 1.93
SNRPA1-205ENST00000558036 XPCQ01831 940 aaPredicted RBP27.1■■□□□ 1.93
SNRPA1-205ENST00000558036 U2SURPO15042 1029 aaKnown RBP27.1■■□□□ 1.93
SNRPA1-205ENST00000558036 PSME1Q06323 249 aa27.1■■□□□ 1.93
SNRPA1-205ENST00000558036 PIK3C2AO00443 1686 aa27.09■■□□□ 1.93
SNRPA1-205ENST00000558036 APAF1O14727 1248 aa27.08■■□□□ 1.93
SNRPA1-205ENST00000558036 NLRP6P59044 892 aa27.08■■□□□ 1.93
SNRPA1-205ENST00000558036 NCOA3Q9Y6Q9 1424 aa27.08■■□□□ 1.93
SNRPA1-205ENST00000558036 ABTB2Q8N961 1025 aa27.08■■□□□ 1.93
SNRPA1-205ENST00000558036 MAP2P11137 1827 aaKnown RBP27.07■■□□□ 1.92
SNRPA1-205ENST00000558036 DIAPH1O60610 1272 aaKnown RBP27.07■■□□□ 1.92
SNRPA1-205ENST00000558036 MST1RQ04912 1400 aa27.06■■□□□ 1.92
SNRPA1-205ENST00000558036 LRRC7Q96NW7 1537 aa27.06■■□□□ 1.92
SNRPA1-205ENST00000558036 NUDCQ9Y266 331 aa27.05■■□□□ 1.92
SNRPA1-205ENST00000558036 MSH6P52701 1360 aa27.05■■□□□ 1.92
SNRPA1-205ENST00000558036 USP31Q70CQ4 1352 aa27.05■■□□□ 1.92
SNRPA1-205ENST00000558036 SMG6Q86US8 1419 aaKnown RBP27.05■■□□□ 1.92
SNRPA1-205ENST00000558036 DCCP43146 1447 aa27.04■■□□□ 1.92
SNRPA1-205ENST00000558036 CADPS2Q86UW7 1296 aa27.03■■□□□ 1.92
SNRPA1-205ENST00000558036 CDCA7LQ96GN5 454 aa27.02■■□□□ 1.92
SNRPA1-205ENST00000558036 XIRP1Q702N8 1843 aaKnown RBP27.02■■□□□ 1.92
SNRPA1-205ENST00000558036 CDK12Q9NYV4 1490 aaPredicted RBP27.02■■□□□ 1.92
SNRPA1-205ENST00000558036 DDX17Q92841 729 aaKnown RBP27.01■■□□□ 1.91
SNRPA1-205ENST00000558036 RUNDC1Q96C34 613 aa27.01■■□□□ 1.91
SNRPA1-205ENST00000558036 DMRT2Q9Y5R5 561 aa27■■□□□ 1.91
SNRPA1-205ENST00000558036 RRP7AQ9Y3A4 280 aaKnown RBP26.99■■□□□ 1.91
SNRPA1-205ENST00000558036 SUPT16HQ9Y5B9 1047 aaKnown RBP26.99■■□□□ 1.91
SNRPA1-205ENST00000558036 MAP3K19Q56UN5 1328 aa26.98■■□□□ 1.91
SNRPA1-205ENST00000558036 NEUROD2Q15784 382 aa26.98■■□□□ 1.91
SNRPA1-205ENST00000558036 PLEKHG5O94827 1062 aa26.97■■□□□ 1.91
SNRPA1-205ENST00000558036 IL13P35225 146 aa26.97■■□□□ 1.91
SNRPA1-205ENST00000558036 KRT28Q7Z3Y7 464 aa26.97■■□□□ 1.91
SNRPA1-205ENST00000558036 TCP11L2Q8N4U5 519 aa26.97■■□□□ 1.91
SNRPA1-205ENST00000558036 LMOD2Q6P5Q4 547 aa26.96■■□□□ 1.91
SNRPA1-205ENST00000558036 MARF1Q9Y4F3 1742 aaKnown RBP26.95■■□□□ 1.91
SNRPA1-205ENST00000558036 HSP90AB2PQ58FF8 381 aa26.95■■□□□ 1.91
SNRPA1-205ENST00000558036 PEAK1Q9H792 1746 aa26.95■■□□□ 1.9
SNRPA1-205ENST00000558036 ZNF521Q96K83 1311 aa26.95■■□□□ 1.9
SNRPA1-205ENST00000558036 PDE3BQ13370 1112 aa26.94■■□□□ 1.9
SNRPA1-205ENST00000558036 HMOX1P09601 288 aa26.93■■□□□ 1.9
SNRPA1-205ENST00000558036 PLEKHF1Q96S99 279 aa26.93■■□□□ 1.9
SNRPA1-205ENST00000558036 KIF1AQ12756 1690 aa26.93■■□□□ 1.9
SNRPA1-205ENST00000558036 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
SNRPA1-205ENST00000558036 EIF4A2Q14240 407 aaKnown RBP26.91■■□□□ 1.9
SNRPA1-205ENST00000558036 AMPHP49418 695 aa26.89■■□□□ 1.9
SNRPA1-205ENST00000558036 RSPH6AQ9H0K4 717 aa26.89■■□□□ 1.89
SNRPA1-205ENST00000558036 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
SNRPA1-205ENST00000558036 SBNO1A3KN83 1393 aa26.88■■□□□ 1.89
SNRPA1-205ENST00000558036 PRKAR2BP31323 418 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 GOLGA2Q08379 1002 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 BRINP3Q76B58 766 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 WWC1Q8IX03 1113 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 SLAIN2Q9P270 581 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 TRPM3Q9HCF6 1732 aaPredicted RBP26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 MAPK8IP3Q9UPT6 1336 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 FCHSD2O94868 740 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 SPINK5Q9NQ38 1064 aaPredicted RBP26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 FLT4P35916 1363 aa26.87■■□□□ 1.89
SNRPA1-205ENST00000558036 FKBP8Q14318 412 aa26.85■■□□□ 1.89
SNRPA1-205ENST00000558036 NPHP3Q7Z494 1330 aa26.85■■□□□ 1.89
SNRPA1-205ENST00000558036 ZBTB7CA1YPR0 619 aa26.83■■□□□ 1.89
SNRPA1-205ENST00000558036 AEBP1Q8IUX7 1158 aa26.83■■□□□ 1.89
SNRPA1-205ENST00000558036 NGEFQ8N5V2 710 aa26.83■■□□□ 1.89
SNRPA1-205ENST00000558036 HOXC9P31274 260 aa26.83■■□□□ 1.88
SNRPA1-205ENST00000558036 IRX6P78412 446 aaPredicted RBP26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms