RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 SH3BP2P78314 561 aa7.17□□□□□ -1.26
GPHN-216ENST00000557678 CABLES1Q8TDN4 633 aa7.17□□□□□ -1.26
GPHN-216ENST00000557678 CFAP99D6REC4 459 aa7.16□□□□□ -1.26
GPHN-216ENST00000557678 DESI1Q6ICB0 168 aa7.16□□□□□ -1.26
GPHN-216ENST00000557678 STK17AQ9UEE5 414 aa7.16□□□□□ -1.26
GPHN-216ENST00000557678 WIPF1O43516 503 aa7.15□□□□□ -1.26
GPHN-216ENST00000557678 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.26
GPHN-216ENST00000557678 MYSM1Q5VVJ2 828 aa7.15□□□□□ -1.26
GPHN-216ENST00000557678 BCANQ96GW7 911 aa7.15□□□□□ -1.26
GPHN-216ENST00000557678 AGERQ15109 404 aa7.14□□□□□ -1.27
GPHN-216ENST00000557678 PRPF38BQ5VTL8 546 aaKnown RBP7.14□□□□□ -1.27
GPHN-216ENST00000557678 LYPD8Q6UX82 237 aa7.14□□□□□ -1.27
GPHN-216ENST00000557678 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
GPHN-216ENST00000557678 ATP13A2Q9NQ11 1180 aa7.14□□□□□ -1.27
GPHN-216ENST00000557678 LIMD1Q9UGP4 676 aa7.14□□□□□ -1.27
GPHN-216ENST00000557678 POLR3EQ9NVU0 708 aa7.13□□□□□ -1.27
GPHN-216ENST00000557678 MAP10Q9P2G4 905 aa7.13□□□□□ -1.27
GPHN-216ENST00000557678 SNRPBP14678 240 aaKnown RBP7.12□□□□□ -1.27
GPHN-216ENST00000557678 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
GPHN-216ENST00000557678 QPCTQ16769 361 aa7.12□□□□□ -1.27
GPHN-216ENST00000557678 RSPH6AQ9H0K4 717 aa7.12□□□□□ -1.27
GPHN-216ENST00000557678 TLL2Q9Y6L7 1015 aa7.12□□□□□ -1.27
GPHN-216ENST00000557678 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
GPHN-216ENST00000557678 CAPN5O15484 640 aaPredicted RBP7.11□□□□□ -1.27
GPHN-216ENST00000557678 SIAH2O43255 324 aa7.11□□□□□ -1.27
GPHN-216ENST00000557678 VARSP26640 1264 aaKnown RBP7.11□□□□□ -1.27
GPHN-216ENST00000557678 CLK2P49760 499 aaKnown RBP7.11□□□□□ -1.27
GPHN-216ENST00000557678 HELBQ8NG08 1087 aaPredicted RBP7.11□□□□□ -1.27
GPHN-216ENST00000557678 SENP2Q9HC62 589 aa7.11□□□□□ -1.27
GPHN-216ENST00000557678 PER1O15534 1290 aaPredicted RBP7.1□□□□□ -1.27
GPHN-216ENST00000557678 SLC24A1O60721 1099 aa7.1□□□□□ -1.27
GPHN-216ENST00000557678 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
GPHN-216ENST00000557678 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
GPHN-216ENST00000557678 FAM174AQ8TBP5 190 aa7.09□□□□□ -1.27
GPHN-216ENST00000557678 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
GPHN-216ENST00000557678 LILRB3O75022 631 aa7.08□□□□□ -1.28
GPHN-216ENST00000557678 F12P00748 615 aaPredicted RBP7.08□□□□□ -1.28
GPHN-216ENST00000557678 BMP1P13497 986 aa7.08□□□□□ -1.28
GPHN-216ENST00000557678 GPBP1L1Q9HC44 474 aaPredicted RBP7.08□□□□□ -1.28
GPHN-216ENST00000557678 NNTQ13423 1086 aa7.07□□□□□ -1.28
GPHN-216ENST00000557678 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
GPHN-216ENST00000557678 TRIM47Q96LD4 638 aa7.07□□□□□ -1.28
GPHN-216ENST00000557678 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
GPHN-216ENST00000557678 BPHLQ86WA6 291 aaPredicted RBP7.06□□□□□ -1.28
GPHN-216ENST00000557678 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
GPHN-216ENST00000557678 KDM4CQ9H3R0 1056 aa7.06□□□□□ -1.28
GPHN-216ENST00000557678 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
GPHN-216ENST00000557678 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
GPHN-216ENST00000557678 WDR4P57081 412 aaKnown RBP7.04□□□□□ -1.28
GPHN-216ENST00000557678 NBPF14Q5TI25 921 aa7.04□□□□□ -1.28
GPHN-216ENST00000557678 DDRGK1Q96HY6 314 aa7.04□□□□□ -1.28
GPHN-216ENST00000557678 CARD14Q9BXL6 1004 aa7.04□□□□□ -1.28
GPHN-216ENST00000557678 TERTO14746 1132 aaKnown RBP7.03□□□□□ -1.28
GPHN-216ENST00000557678 ADH1CP00326 375 aa7.03□□□□□ -1.28
GPHN-216ENST00000557678 CTDSPL2Q05D32 466 aa7.03□□□□□ -1.28
GPHN-216ENST00000557678 FAM117AQ9C073 453 aa7.03□□□□□ -1.28
GPHN-216ENST00000557678 SCARF1Q14162 830 aa7.02□□□□□ -1.29
GPHN-216ENST00000557678 SKIV2LQ15477 1246 aaKnown RBP7.02□□□□□ -1.29
GPHN-216ENST00000557678 TRIM46Q7Z4K8 759 aa7.02□□□□□ -1.29
GPHN-216ENST00000557678 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
GPHN-216ENST00000557678 ZIC2O95409 532 aaPredicted RBP7.01□□□□□ -1.29
GPHN-216ENST00000557678 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
GPHN-216ENST00000557678 MPNDQ8N594 471 aa7.01□□□□□ -1.29
GPHN-216ENST00000557678 ZFP42Q96MM3 310 aa7.01□□□□□ -1.29
GPHN-216ENST00000557678 AP1G2O75843 785 aa7□□□□□ -1.29
GPHN-216ENST00000557678 TIMP2P16035 220 aa7□□□□□ -1.29
GPHN-216ENST00000557678 SH3D19Q5HYK7 790 aa7□□□□□ -1.29
GPHN-216ENST00000557678 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
GPHN-216ENST00000557678 VASH1Q7L8A9 365 aaPredicted RBP7□□□□□ -1.29
GPHN-216ENST00000557678 LRRN4Q8WUT4 740 aa7□□□□□ -1.29
GPHN-216ENST00000557678 PURBQ96QR8 312 aaKnown RBP7□□□□□ -1.29
GPHN-216ENST00000557678 NR5A1Q13285 461 aa6.99□□□□□ -1.29
GPHN-216ENST00000557678 SLC16A10Q8TF71 515 aa6.99□□□□□ -1.29
GPHN-216ENST00000557678 CDK15Q96Q40 435 aa6.99□□□□□ -1.29
GPHN-216ENST00000557678 UPP2O95045 317 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 FSHRP23945 695 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 GMPRP36959 345 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 SUZ12Q15022 739 aaKnown RBP6.98□□□□□ -1.29
GPHN-216ENST00000557678 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 ITPKCQ96DU7 683 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 ARHGAP9Q9BRR9 750 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 ZFAND3Q9H8U3 227 aa6.98□□□□□ -1.29
GPHN-216ENST00000557678 NR3C2P08235 984 aa6.97□□□□□ -1.29
GPHN-216ENST00000557678 NR6A1Q15406 480 aa6.97□□□□□ -1.29
GPHN-216ENST00000557678 GPKOWQ92917 476 aaPredicted RBP eCLIP6.97□□□□□ -1.29
GPHN-216ENST00000557678 VEGFBP49765 207 aa6.96□□□□□ -1.3
GPHN-216ENST00000557678 NEUROD2Q15784 382 aa6.96□□□□□ -1.3
GPHN-216ENST00000557678 SH3BP5LQ7L8J4 393 aa6.96□□□□□ -1.3
GPHN-216ENST00000557678 ZBTB33Q86T24 672 aa6.96□□□□□ -1.3
GPHN-216ENST00000557678 NXF1Q9UBU9 619 aaKnown RBP6.96□□□□□ -1.3
GPHN-216ENST00000557678 FKBPLQ9UIM3 349 aa6.96□□□□□ -1.3
GPHN-216ENST00000557678 BMP2P12643 396 aa6.95□□□□□ -1.3
GPHN-216ENST00000557678 GRM5P41594 1212 aa6.95□□□□□ -1.3
GPHN-216ENST00000557678 SH3RF1Q7Z6J0 888 aa6.95□□□□□ -1.3
GPHN-216ENST00000557678 SLC10A4Q96EP9 437 aa6.95□□□□□ -1.3
GPHN-216ENST00000557678 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
GPHN-216ENST00000557678 MAN1A2O60476 641 aa6.94□□□□□ -1.3
GPHN-216ENST00000557678 ERFEQ4G0M1 354 aa6.94□□□□□ -1.3
GPHN-216ENST00000557678 FBXO31Q5XUX0 539 aaPredicted RBP6.94□□□□□ -1.3
GPHN-216ENST00000557678 CCDC116Q8IYX3 515 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms