RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 LMOD2Q6P5Q4 547 aa21.08■□□□□ 0.97
NEDD1-213ENST00000557644 SPATA31A3Q5VYP0 1347 aa21.08■□□□□ 0.96
NEDD1-213ENST00000557644 TTC21BQ7Z4L5 1316 aa21.08■□□□□ 0.96
NEDD1-213ENST00000557644 MON2Q7Z3U7 1717 aa21.07■□□□□ 0.96
NEDD1-213ENST00000557644 TRPM3Q9HCF6 1732 aaPredicted RBP21.07■□□□□ 0.96
NEDD1-213ENST00000557644 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
NEDD1-213ENST00000557644 LRRC59Q96AG4 307 aaKnown RBP21.07■□□□□ 0.96
NEDD1-213ENST00000557644 DDX10Q13206 875 aaKnown RBP21.07■□□□□ 0.96
NEDD1-213ENST00000557644 EDC4Q6P2E9 1401 aaKnown RBP21.06■□□□□ 0.96
NEDD1-213ENST00000557644 NSD3Q9BZ95 1437 aa21.06■□□□□ 0.96
NEDD1-213ENST00000557644 NUTM2GQ5VZR2 741 aa21.06■□□□□ 0.96
NEDD1-213ENST00000557644 TNS3Q68CZ2 1445 aa21.05■□□□□ 0.96
NEDD1-213ENST00000557644 NRKQ7Z2Y5 1582 aa21.05■□□□□ 0.96
NEDD1-213ENST00000557644 PLEKHG5O94827 1062 aa21.05■□□□□ 0.96
NEDD1-213ENST00000557644 NME9Q86XW9 330 aa21.04■□□□□ 0.96
NEDD1-213ENST00000557644 ABTB2Q8N961 1025 aa21.04■□□□□ 0.96
NEDD1-213ENST00000557644 ZRANB1Q9UGI0 708 aa21.03■□□□□ 0.96
NEDD1-213ENST00000557644 ILDR1Q86SU0 546 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-213ENST00000557644 BRD4O60885 1362 aaPredicted RBP21.02■□□□□ 0.96
NEDD1-213ENST00000557644 PER1O15534 1290 aaPredicted RBP21.02■□□□□ 0.96
NEDD1-213ENST00000557644 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
NEDD1-213ENST00000557644 ALS2Q96Q42 1657 aa21.01■□□□□ 0.95
NEDD1-213ENST00000557644 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
NEDD1-213ENST00000557644 FYB1O15117 783 aa21■□□□□ 0.95
NEDD1-213ENST00000557644 CABLES1Q8TDN4 633 aa21■□□□□ 0.95
NEDD1-213ENST00000557644 ARHGEF10O15013 1369 aa20.99■□□□□ 0.95
NEDD1-213ENST00000557644 PIK3C2AO00443 1686 aa20.99■□□□□ 0.95
NEDD1-213ENST00000557644 NLRP6P59044 892 aa20.99■□□□□ 0.95
NEDD1-213ENST00000557644 KNSTRNQ9Y448 316 aa20.99■□□□□ 0.95
NEDD1-213ENST00000557644 JCADQ9P266 1359 aa20.99■□□□□ 0.95
NEDD1-213ENST00000557644 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
NEDD1-213ENST00000557644 CGNL1Q0VF96 1302 aa20.97■□□□□ 0.95
NEDD1-213ENST00000557644 CNGB1Q14028 1251 aaPredicted RBP20.96■□□□□ 0.95
NEDD1-213ENST00000557644 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
NEDD1-213ENST00000557644 NLRP13Q86W25 1043 aa20.95■□□□□ 0.94
NEDD1-213ENST00000557644 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
NEDD1-213ENST00000557644 USP31Q70CQ4 1352 aa20.93■□□□□ 0.94
NEDD1-213ENST00000557644 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
NEDD1-213ENST00000557644 NUTM2BA6NNL0 878 aaPredicted RBP20.93■□□□□ 0.94
NEDD1-213ENST00000557644 NUTM2EB1AL46 878 aaPredicted RBP20.93■□□□□ 0.94
NEDD1-213ENST00000557644 SOX12O15370 315 aa20.93■□□□□ 0.94
NEDD1-213ENST00000557644 NUTM2AQ8IVF1 878 aaPredicted RBP20.93■□□□□ 0.94
NEDD1-213ENST00000557644 OVOS2A0A0J9YW53 1432 aa20.92■□□□□ 0.94
NEDD1-213ENST00000557644 OVOS2Q6IE36 1432 aa20.92■□□□□ 0.94
NEDD1-213ENST00000557644 CC2D1BQ5T0F9 858 aaKnown RBP20.92■□□□□ 0.94
NEDD1-213ENST00000557644 USP19O94966 1318 aa20.92■□□□□ 0.94
NEDD1-213ENST00000557644 COG3Q96JB2 828 aa20.92■□□□□ 0.94
NEDD1-213ENST00000557644 COL22A1Q8NFW1 1626 aaPredicted RBP20.91■□□□□ 0.94
NEDD1-213ENST00000557644 MARF1Q9Y4F3 1742 aaKnown RBP20.91■□□□□ 0.94
NEDD1-213ENST00000557644 KIF20BQ96Q89 1820 aa20.9■□□□□ 0.94
NEDD1-213ENST00000557644 FBLN1P23142 703 aa20.9■□□□□ 0.94
NEDD1-213ENST00000557644 GCP02774 474 aa20.89■□□□□ 0.94
NEDD1-213ENST00000557644 HAP1P54257 671 aaPredicted RBP20.89■□□□□ 0.93
NEDD1-213ENST00000557644 SPATA31A6Q5VVP1 1343 aa20.88■□□□□ 0.93
NEDD1-213ENST00000557644 CRYBG1Q9Y4K1 1723 aa20.88■□□□□ 0.93
NEDD1-213ENST00000557644 ADAMTS2O95450 1211 aa20.87■□□□□ 0.93
NEDD1-213ENST00000557644 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
NEDD1-213ENST00000557644 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
NEDD1-213ENST00000557644 LRP6O75581 1613 aa20.87■□□□□ 0.93
NEDD1-213ENST00000557644 SLIT3O75094 1523 aa20.87■□□□□ 0.93
NEDD1-213ENST00000557644 NSD2O96028 1365 aa20.86■□□□□ 0.93
NEDD1-213ENST00000557644 ABCA3Q99758 1704 aa20.86■□□□□ 0.93
NEDD1-213ENST00000557644 PHRF1Q9P1Y6 1649 aaKnown RBP20.86■□□□□ 0.93
NEDD1-213ENST00000557644 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
NEDD1-213ENST00000557644 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
NEDD1-213ENST00000557644 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
NEDD1-213ENST00000557644 KCNH5Q8NCM2 988 aa20.83■□□□□ 0.93
NEDD1-213ENST00000557644 NFAT5O94916 1531 aa20.83■□□□□ 0.92
NEDD1-213ENST00000557644 KIAA0232Q92628 1395 aa20.82■□□□□ 0.92
NEDD1-213ENST00000557644 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
NEDD1-213ENST00000557644 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
NEDD1-213ENST00000557644 CHRNA2Q15822 529 aa20.81■□□□□ 0.92
NEDD1-213ENST00000557644 ANKRD26Q9UPS8 1709 aa20.81■□□□□ 0.92
NEDD1-213ENST00000557644 FAM83GA6ND36 823 aa20.8■□□□□ 0.92
NEDD1-213ENST00000557644 ARHGEF25Q86VW2 580 aa20.79■□□□□ 0.92
NEDD1-213ENST00000557644 PRDM11Q9NQV5 511 aa20.79■□□□□ 0.92
NEDD1-213ENST00000557644 MEX3CQ5U5Q3 659 aaKnown RBP20.78■□□□□ 0.92
NEDD1-213ENST00000557644 C8orf37Q96NL8 207 aa20.78■□□□□ 0.92
NEDD1-213ENST00000557644 CPDO75976 1380 aa20.78■□□□□ 0.92
NEDD1-213ENST00000557644 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
NEDD1-213ENST00000557644 EMILIN1Q9Y6C2 1016 aa20.77■□□□□ 0.92
NEDD1-213ENST00000557644 POLKQ9UBT6 870 aa20.75■□□□□ 0.91
NEDD1-213ENST00000557644 AATKQ6ZMQ8 1374 aa20.75■□□□□ 0.91
NEDD1-213ENST00000557644 PARD3Q8TEW0 1356 aa20.75■□□□□ 0.91
NEDD1-213ENST00000557644 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
NEDD1-213ENST00000557644 NGLY1Q96IV0 654 aa20.74■□□□□ 0.91
NEDD1-213ENST00000557644 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
NEDD1-213ENST00000557644 PRKRIP1Q9H875 184 aaPredicted RBP20.73■□□□□ 0.91
NEDD1-213ENST00000557644 LTN1O94822 1766 aa20.72■□□□□ 0.91
NEDD1-213ENST00000557644 AMPHP49418 695 aa20.72■□□□□ 0.91
NEDD1-213ENST00000557644 BTG4Q9NY30 223 aa20.72■□□□□ 0.91
NEDD1-213ENST00000557644 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
NEDD1-213ENST00000557644 MAP2P11137 1827 aaKnown RBP20.7■□□□□ 0.9
NEDD1-213ENST00000557644 PEAK1Q9H792 1746 aa20.7■□□□□ 0.9
NEDD1-213ENST00000557644 HOXC9P31274 260 aa20.7■□□□□ 0.9
NEDD1-213ENST00000557644 MTHFSP49914 203 aa20.7■□□□□ 0.9
NEDD1-213ENST00000557644 RALBP1Q15311 655 aa20.7■□□□□ 0.9
NEDD1-213ENST00000557644 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
NEDD1-213ENST00000557644 HSP90AB2PQ58FF8 381 aa20.7■□□□□ 0.9
NEDD1-213ENST00000557644 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms