RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 NINLQ9Y2I6 1382 aa14.57□□□□□ -0.08
TGFB3-207ENST00000557493 SLIT2O94813 1529 aa14.56□□□□□ -0.08
TGFB3-207ENST00000557493 BAG6P46379 1132 aa14.56□□□□□ -0.08
TGFB3-207ENST00000557493 SAFB2Q14151 953 aaKnown RBP eCLIP14.55□□□□□ -0.08
TGFB3-207ENST00000557493 MINK1Q8N4C8 1332 aaPredicted RBP14.55□□□□□ -0.08
TGFB3-207ENST00000557493 PLEKHH1Q9ULM0 1364 aa14.55□□□□□ -0.08
TGFB3-207ENST00000557493 PXDNQ92626 1479 aa14.55□□□□□ -0.08
TGFB3-207ENST00000557493 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.55□□□□□ -0.08
TGFB3-207ENST00000557493 FOXO3O43524 673 aa14.54□□□□□ -0.08
TGFB3-207ENST00000557493 XPCQ01831 940 aaPredicted RBP14.54□□□□□ -0.08
TGFB3-207ENST00000557493 KRT27Q7Z3Y8 459 aa14.54□□□□□ -0.08
TGFB3-207ENST00000557493 KTN1Q86UP2 1357 aaKnown RBP14.53□□□□□ -0.08
TGFB3-207ENST00000557493 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.08
TGFB3-207ENST00000557493 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
TGFB3-207ENST00000557493 VPS72Q15906 364 aa14.52□□□□□ -0.09
TGFB3-207ENST00000557493 WAPLQ7Z5K2 1190 aa14.52□□□□□ -0.09
TGFB3-207ENST00000557493 CCER2I3L3R5 266 aa14.51□□□□□ -0.09
TGFB3-207ENST00000557493 CCDC9Q9Y3X0 531 aaKnown RBP14.51□□□□□ -0.09
TGFB3-207ENST00000557493 ONECUT3O60422 494 aaPredicted RBP14.5□□□□□ -0.09
TGFB3-207ENST00000557493 YY1P25490 414 aa14.5□□□□□ -0.09
TGFB3-207ENST00000557493 PANK3Q9H999 370 aa14.5□□□□□ -0.09
TGFB3-207ENST00000557493 USP32Q8NFA0 1604 aa14.5□□□□□ -0.09
TGFB3-207ENST00000557493 CDC42BPGQ6DT37 1551 aa14.49□□□□□ -0.09
TGFB3-207ENST00000557493 HAP1P54257 671 aaPredicted RBP14.49□□□□□ -0.09
TGFB3-207ENST00000557493 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
TGFB3-207ENST00000557493 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
TGFB3-207ENST00000557493 ANKRD36BQ8N2N9 1353 aa14.48□□□□□ -0.09
TGFB3-207ENST00000557493 SPATA31A3Q5VYP0 1347 aa14.48□□□□□ -0.09
TGFB3-207ENST00000557493 A0A0G2JS52 829 aa14.48□□□□□ -0.09
TGFB3-207ENST00000557493 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
TGFB3-207ENST00000557493 MYT1Q01538 1121 aa14.48□□□□□ -0.09
TGFB3-207ENST00000557493 R3HDM1Q15032 1099 aaKnown RBP14.48□□□□□ -0.09
TGFB3-207ENST00000557493 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
TGFB3-207ENST00000557493 ATP7BP35670 1465 aa14.48□□□□□ -0.09
TGFB3-207ENST00000557493 ITSN1Q15811 1721 aa14.47□□□□□ -0.09
TGFB3-207ENST00000557493 TOPAZ1Q8N9V7 1692 aa14.47□□□□□ -0.09
TGFB3-207ENST00000557493 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
TGFB3-207ENST00000557493 KNSTRNQ9Y448 316 aa14.47□□□□□ -0.09
TGFB3-207ENST00000557493 BRWD3Q6RI45 1802 aa14.47□□□□□ -0.09
TGFB3-207ENST00000557493 NPC1L1Q9UHC9 1359 aa14.47□□□□□ -0.09
TGFB3-207ENST00000557493 PER1O15534 1290 aaPredicted RBP14.46□□□□□ -0.09
TGFB3-207ENST00000557493 EN1Q05925 392 aaPredicted RBP14.46□□□□□ -0.09
TGFB3-207ENST00000557493 RALBP1Q15311 655 aa14.45□□□□□ -0.1
TGFB3-207ENST00000557493 PARD3Q8TEW0 1356 aa14.45□□□□□ -0.1
TGFB3-207ENST00000557493 FMN2Q9NZ56 1722 aa14.44□□□□□ -0.1
TGFB3-207ENST00000557493 NSD3Q9BZ95 1437 aa14.44□□□□□ -0.1
TGFB3-207ENST00000557493 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
TGFB3-207ENST00000557493 ANKARQ7Z5J8 1434 aa14.43□□□□□ -0.1
TGFB3-207ENST00000557493 KRT28Q7Z3Y7 464 aa14.43□□□□□ -0.1
TGFB3-207ENST00000557493 SLC12A5Q9H2X9 1139 aa14.43□□□□□ -0.1
TGFB3-207ENST00000557493 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
TGFB3-207ENST00000557493 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
TGFB3-207ENST00000557493 FAM98CQ17RN3 349 aaKnown RBP14.42□□□□□ -0.1
TGFB3-207ENST00000557493 HDGFL2Q7Z4V5 671 aaPredicted RBP14.42□□□□□ -0.1
TGFB3-207ENST00000557493 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
TGFB3-207ENST00000557493 NSD2O96028 1365 aa14.42□□□□□ -0.1
TGFB3-207ENST00000557493 MYBBP1AQ9BQG0 1328 aaKnown RBP14.41□□□□□ -0.1
TGFB3-207ENST00000557493 DISP2A7MBM2 1401 aa14.41□□□□□ -0.1
TGFB3-207ENST00000557493 TNS3Q68CZ2 1445 aa14.41□□□□□ -0.1
TGFB3-207ENST00000557493 CABLES1Q8TDN4 633 aa14.41□□□□□ -0.1
TGFB3-207ENST00000557493 CD163L1Q9NR16 1453 aa14.41□□□□□ -0.1
TGFB3-207ENST00000557493 AKAP12Q02952 1782 aa14.41□□□□□ -0.1
TGFB3-207ENST00000557493 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
TGFB3-207ENST00000557493 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
TGFB3-207ENST00000557493 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
TGFB3-207ENST00000557493 KIF20BQ96Q89 1820 aa14.4□□□□□ -0.1
TGFB3-207ENST00000557493 ANKRD26Q9UPS8 1709 aa14.4□□□□□ -0.1
TGFB3-207ENST00000557493 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
TGFB3-207ENST00000557493 PSME1Q06323 249 aa14.39□□□□□ -0.11
TGFB3-207ENST00000557493 CC2D1BQ5T0F9 858 aaKnown RBP14.39□□□□□ -0.11
TGFB3-207ENST00000557493 CARD14Q9BXL6 1004 aa14.39□□□□□ -0.11
TGFB3-207ENST00000557493 CCDC61Q9Y6R9 512 aa14.39□□□□□ -0.11
TGFB3-207ENST00000557493 CGNL1Q0VF96 1302 aa14.39□□□□□ -0.11
TGFB3-207ENST00000557493 NWD2Q9ULI1 1742 aa14.38□□□□□ -0.11
TGFB3-207ENST00000557493 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
TGFB3-207ENST00000557493 CNGB1Q14028 1251 aaPredicted RBP14.38□□□□□ -0.11
TGFB3-207ENST00000557493 KIF1AQ12756 1690 aa14.38□□□□□ -0.11
TGFB3-207ENST00000557493 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
TGFB3-207ENST00000557493 BRD4O60885 1362 aaPredicted RBP14.37□□□□□ -0.11
TGFB3-207ENST00000557493 PLCH1Q4KWH8 1693 aa14.37□□□□□ -0.11
TGFB3-207ENST00000557493 EZH2Q15910 746 aaKnown RBP14.37□□□□□ -0.11
TGFB3-207ENST00000557493 LMOD2Q6P5Q4 547 aa14.37□□□□□ -0.11
TGFB3-207ENST00000557493 CABP1Q9NZU7 370 aa14.37□□□□□ -0.11
TGFB3-207ENST00000557493 CPSF1Q10570 1443 aaKnown RBP14.37□□□□□ -0.11
TGFB3-207ENST00000557493 RGPD1P0DJD0 1748 aa14.37□□□□□ -0.11
TGFB3-207ENST00000557493 PRR36Q9H6K5 1346 aa14.37□□□□□ -0.11
TGFB3-207ENST00000557493 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
TGFB3-207ENST00000557493 NRKQ7Z2Y5 1582 aa14.36□□□□□ -0.11
TGFB3-207ENST00000557493 EDC4Q6P2E9 1401 aaKnown RBP14.36□□□□□ -0.11
TGFB3-207ENST00000557493 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
TGFB3-207ENST00000557493 FAM182BQ5T319 152 aa14.36□□□□□ -0.11
TGFB3-207ENST00000557493 NLRP13Q86W25 1043 aa14.36□□□□□ -0.11
TGFB3-207ENST00000557493 MRS2Q9HD23 443 aa14.35□□□□□ -0.11
TGFB3-207ENST00000557493 PHF8Q9UPP1 1060 aa14.35□□□□□ -0.11
TGFB3-207ENST00000557493 PLEKHG3A1L390 1219 aa14.34□□□□□ -0.11
TGFB3-207ENST00000557493 CAMKK2Q96RR4 588 aa14.34□□□□□ -0.11
TGFB3-207ENST00000557493 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
TGFB3-207ENST00000557493 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
TGFB3-207ENST00000557493 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
TGFB3-207ENST00000557493 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms