RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 ZNF518AQ6AHZ1 1483 aa17.25■□□□□ 0.35
LINC00639-205ENST00000557440 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
LINC00639-205ENST00000557440 RTF1Q92541 710 aaKnown RBP17.25■□□□□ 0.35
LINC00639-205ENST00000557440 AMPHP49418 695 aa17.25■□□□□ 0.35
LINC00639-205ENST00000557440 TRIM35Q9UPQ4 493 aa17.25■□□□□ 0.35
LINC00639-205ENST00000557440 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
LINC00639-205ENST00000557440 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
LINC00639-205ENST00000557440 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
LINC00639-205ENST00000557440 POLKQ9UBT6 870 aa17.23■□□□□ 0.35
LINC00639-205ENST00000557440 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
LINC00639-205ENST00000557440 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
LINC00639-205ENST00000557440 TBC1D2Q9BYX2 928 aa17.23■□□□□ 0.35
LINC00639-205ENST00000557440 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
LINC00639-205ENST00000557440 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
LINC00639-205ENST00000557440 YEATS2Q9ULM3 1422 aa17.22■□□□□ 0.35
LINC00639-205ENST00000557440 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
LINC00639-205ENST00000557440 TRPM2O94759 1503 aa17.21■□□□□ 0.34
LINC00639-205ENST00000557440 E9PCH4 1651 aa17.2■□□□□ 0.34
LINC00639-205ENST00000557440 UNC13BO14795 1591 aa17.2■□□□□ 0.34
LINC00639-205ENST00000557440 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
LINC00639-205ENST00000557440 POLR1AO95602 1720 aaPredicted RBP17.19■□□□□ 0.34
LINC00639-205ENST00000557440 SMARCA5O60264 1052 aaPredicted RBP17.19■□□□□ 0.34
LINC00639-205ENST00000557440 GNAI1P63096 354 aa17.19■□□□□ 0.34
LINC00639-205ENST00000557440 FCHSD2O94868 740 aa17.18■□□□□ 0.34
LINC00639-205ENST00000557440 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
LINC00639-205ENST00000557440 F6X3S4 739 aa17.17■□□□□ 0.34
LINC00639-205ENST00000557440 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
LINC00639-205ENST00000557440 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
LINC00639-205ENST00000557440 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
LINC00639-205ENST00000557440 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
LINC00639-205ENST00000557440 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
LINC00639-205ENST00000557440 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
LINC00639-205ENST00000557440 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
LINC00639-205ENST00000557440 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
LINC00639-205ENST00000557440 INSRP06213 1382 aa17.16■□□□□ 0.34
LINC00639-205ENST00000557440 PLXNC1O60486 1568 aa17.16■□□□□ 0.34
LINC00639-205ENST00000557440 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
LINC00639-205ENST00000557440 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
LINC00639-205ENST00000557440 MADDQ8WXG6 1647 aa17.15■□□□□ 0.34
LINC00639-205ENST00000557440 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
LINC00639-205ENST00000557440 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
LINC00639-205ENST00000557440 FOXO3O43524 673 aa17.15■□□□□ 0.34
LINC00639-205ENST00000557440 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
LINC00639-205ENST00000557440 TRIM6-TRIM34B2RNG4 842 aa17.14■□□□□ 0.33
LINC00639-205ENST00000557440 NLRP6P59044 892 aa17.14■□□□□ 0.33
LINC00639-205ENST00000557440 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
LINC00639-205ENST00000557440 USHBP1Q8N6Y0 703 aa17.13■□□□□ 0.33
LINC00639-205ENST00000557440 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
LINC00639-205ENST00000557440 RILPL2Q969X0 211 aa17.13■□□□□ 0.33
LINC00639-205ENST00000557440 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
LINC00639-205ENST00000557440 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
LINC00639-205ENST00000557440 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
LINC00639-205ENST00000557440 EID1Q9Y6B2 187 aa17.11■□□□□ 0.33
LINC00639-205ENST00000557440 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
LINC00639-205ENST00000557440 STK31Q9BXU1 1019 aa17.1■□□□□ 0.33
LINC00639-205ENST00000557440 KDM5AP29375 1690 aaKnown RBP17.1■□□□□ 0.33
LINC00639-205ENST00000557440 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
LINC00639-205ENST00000557440 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
LINC00639-205ENST00000557440 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
LINC00639-205ENST00000557440 SYNMO15061 1565 aa17.1■□□□□ 0.33
LINC00639-205ENST00000557440 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
LINC00639-205ENST00000557440 VAMP4O75379 141 aa17.09■□□□□ 0.33
LINC00639-205ENST00000557440 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
LINC00639-205ENST00000557440 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
LINC00639-205ENST00000557440 ZBTB40Q9NUA8 1239 aa17.09■□□□□ 0.33
LINC00639-205ENST00000557440 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
LINC00639-205ENST00000557440 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
LINC00639-205ENST00000557440 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
LINC00639-205ENST00000557440 CHMP5Q9NZZ3 219 aa17.08■□□□□ 0.33
LINC00639-205ENST00000557440 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC00639-205ENST00000557440 USP19O94966 1318 aa17.08■□□□□ 0.32
LINC00639-205ENST00000557440 OTUD7AQ8TE49 926 aaPredicted RBP17.07■□□□□ 0.32
LINC00639-205ENST00000557440 CHMP4BQ9H444 224 aaKnown RBP17.07■□□□□ 0.32
LINC00639-205ENST00000557440 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
LINC00639-205ENST00000557440 TAOK2Q9UL54 1235 aa17.07■□□□□ 0.32
LINC00639-205ENST00000557440 TRAK2O60296 914 aa17.06■□□□□ 0.32
LINC00639-205ENST00000557440 SPHKAPQ2M3C7 1700 aa17.06■□□□□ 0.32
LINC00639-205ENST00000557440 ACEP12821 1306 aa17.06■□□□□ 0.32
LINC00639-205ENST00000557440 ABCA6Q8N139 1617 aa17.06■□□□□ 0.32
LINC00639-205ENST00000557440 MAP4K4O95819 1239 aaPredicted RBP17.06■□□□□ 0.32
LINC00639-205ENST00000557440 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
LINC00639-205ENST00000557440 NINLQ9Y2I6 1382 aa17.05■□□□□ 0.32
LINC00639-205ENST00000557440 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
LINC00639-205ENST00000557440 NAP1L5Q96NT1 182 aaPredicted RBP17.05■□□□□ 0.32
LINC00639-205ENST00000557440 GOLGA6L22H0YM25 854 aa17.04■□□□□ 0.32
LINC00639-205ENST00000557440 MEIS3Q99687 375 aa17.04■□□□□ 0.32
LINC00639-205ENST00000557440 MAP3K4Q9Y6R4 1608 aa17.04■□□□□ 0.32
LINC00639-205ENST00000557440 CCDC9Q9Y3X0 531 aaKnown RBP17.04■□□□□ 0.32
LINC00639-205ENST00000557440 MCM4P33991 863 aa17.04■□□□□ 0.32
LINC00639-205ENST00000557440 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
LINC00639-205ENST00000557440 TBC1D9Q6ZT07 1266 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 MRPL50Q8N5N7 158 aaKnown RBP17.03■□□□□ 0.32
LINC00639-205ENST00000557440 PPIP5K1Q6PFW1 1433 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 ABCC11Q96J66 1382 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 SBNO2Q9Y2G9 1366 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 DTNBO60941 627 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 ANXA1P04083 346 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
LINC00639-205ENST00000557440 IL1RAPL2Q9NP60 686 aa17.03■□□□□ 0.32
LINC00639-205ENST00000557440 EFCAB6Q5THR3 1501 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms