RNA–Protein interactions for RNA: ENST00000557057.5

ALKBH1-204, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 1,750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-204ENST00000557057 COL3A1P02461 1466 aaPredicted RBP23.81■■□□□ 1.4
ALKBH1-204ENST00000557057 NALCNQ8IZF0 1738 aa23.8■■□□□ 1.4
ALKBH1-204ENST00000557057 PNPLA6Q8IY17 1366 aa23.79■■□□□ 1.4
ALKBH1-204ENST00000557057 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
ALKBH1-204ENST00000557057 COG3Q96JB2 828 aa23.78■■□□□ 1.4
ALKBH1-204ENST00000557057 SSH2Q76I76 1423 aa23.78■■□□□ 1.4
ALKBH1-204ENST00000557057 KDM4FA0A1W2PPD8 638 aa23.78■■□□□ 1.4
ALKBH1-204ENST00000557057 ADGRL3Q9HAR2 1447 aa23.77■■□□□ 1.4
ALKBH1-204ENST00000557057 AATKQ6ZMQ8 1374 aa23.77■■□□□ 1.4
ALKBH1-204ENST00000557057 ZNF521Q96K83 1311 aa23.77■■□□□ 1.4
ALKBH1-204ENST00000557057 ZRANB1Q9UGI0 708 aa23.77■■□□□ 1.4
ALKBH1-204ENST00000557057 APAF1O14727 1248 aa23.76■■□□□ 1.39
ALKBH1-204ENST00000557057 NGEFQ8N5V2 710 aa23.76■■□□□ 1.39
ALKBH1-204ENST00000557057 PMFBP1Q8TBY8 1022 aa23.76■■□□□ 1.39
ALKBH1-204ENST00000557057 RGPD8O14715 1765 aaPredicted RBP23.76■■□□□ 1.39
ALKBH1-204ENST00000557057 POLKQ9UBT6 870 aa23.75■■□□□ 1.39
ALKBH1-204ENST00000557057 RUNDC1Q96C34 613 aa23.74■■□□□ 1.39
ALKBH1-204ENST00000557057 CDCA7LQ96GN5 454 aa23.74■■□□□ 1.39
ALKBH1-204ENST00000557057 NGDNQ8NEJ9 315 aaKnown RBP23.73■■□□□ 1.39
ALKBH1-204ENST00000557057 TTC21AQ8NDW8 1320 aa23.73■■□□□ 1.39
ALKBH1-204ENST00000557057 RBM33Q96EV2 1170 aaKnown RBP23.73■■□□□ 1.39
ALKBH1-204ENST00000557057 OVOS2A0A0J9YW53 1432 aa23.72■■□□□ 1.39
ALKBH1-204ENST00000557057 OVOS2Q6IE36 1432 aa23.72■■□□□ 1.39
ALKBH1-204ENST00000557057 U2AF1L5P0DN76 240 aaPredicted RBP23.72■■□□□ 1.39
ALKBH1-204ENST00000557057 FBLN1P23142 703 aa23.72■■□□□ 1.39
ALKBH1-204ENST00000557057 U2AF1Q01081 240 aaKnown RBP eCLIP23.72■■□□□ 1.39
ALKBH1-204ENST00000557057 IQSEC2Q5JU85 1478 aa23.71■■□□□ 1.39
ALKBH1-204ENST00000557057 DIAPH1O60610 1272 aaKnown RBP23.7■■□□□ 1.39
ALKBH1-204ENST00000557057 MAP2P11137 1827 aaKnown RBP23.7■■□□□ 1.38
ALKBH1-204ENST00000557057 CDK12Q9NYV4 1490 aaPredicted RBP23.69■■□□□ 1.38
ALKBH1-204ENST00000557057 RNF123Q5XPI4 1314 aa23.69■■□□□ 1.38
ALKBH1-204ENST00000557057 HSPA2P54652 639 aa23.68■■□□□ 1.38
ALKBH1-204ENST00000557057 GOLGA2Q08379 1002 aa23.68■■□□□ 1.38
ALKBH1-204ENST00000557057 EMILIN1Q9Y6C2 1016 aa23.68■■□□□ 1.38
ALKBH1-204ENST00000557057 U2SURPO15042 1029 aaKnown RBP23.67■■□□□ 1.38
ALKBH1-204ENST00000557057 USP31Q70CQ4 1352 aa23.67■■□□□ 1.38
ALKBH1-204ENST00000557057 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
ALKBH1-204ENST00000557057 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
ALKBH1-204ENST00000557057 C14orf37Q86TY3 774 aa23.65■■□□□ 1.38
ALKBH1-204ENST00000557057 PROSER2Q86WR7 435 aaPredicted RBP23.65■■□□□ 1.38
ALKBH1-204ENST00000557057 TCP11L2Q8N4U5 519 aa23.65■■□□□ 1.38
ALKBH1-204ENST00000557057 NCBP3Q53F19 620 aaKnown RBP23.65■■□□□ 1.38
ALKBH1-204ENST00000557057 PHF8Q9UPP1 1060 aa23.65■■□□□ 1.38
ALKBH1-204ENST00000557057 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
ALKBH1-204ENST00000557057 ERICH6BQ5W0A0 696 aa23.63■■□□□ 1.37
ALKBH1-204ENST00000557057 IRX6P78412 446 aaPredicted RBP23.63■■□□□ 1.37
ALKBH1-204ENST00000557057 DUSP27Q5VZP5 1158 aa23.63■■□□□ 1.37
ALKBH1-204ENST00000557057 PLEKHF1Q96S99 279 aa23.63■■□□□ 1.37
ALKBH1-204ENST00000557057 RCAN3Q9UKA8 241 aa23.63■■□□□ 1.37
ALKBH1-204ENST00000557057 SLFN5Q08AF3 891 aa23.62■■□□□ 1.37
ALKBH1-204ENST00000557057 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
ALKBH1-204ENST00000557057 WWC1Q8IX03 1113 aa23.61■■□□□ 1.37
ALKBH1-204ENST00000557057 TRMT2AQ8IZ69 625 aaKnown RBP23.61■■□□□ 1.37
ALKBH1-204ENST00000557057 PIK3C2AO00443 1686 aa23.61■■□□□ 1.37
ALKBH1-204ENST00000557057 CCDC27Q2M243 656 aa23.6■■□□□ 1.37
ALKBH1-204ENST00000557057 IL13P35225 146 aa23.6■■□□□ 1.37
ALKBH1-204ENST00000557057 PNNQ9H307 717 aaKnown RBP23.6■■□□□ 1.37
ALKBH1-204ENST00000557057 E9PSI1 815 aa23.58■■□□□ 1.37
ALKBH1-204ENST00000557057 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
ALKBH1-204ENST00000557057 C19orf44Q9H6X5 657 aa23.58■■□□□ 1.37
ALKBH1-204ENST00000557057 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.37
ALKBH1-204ENST00000557057 NCOA3Q9Y6Q9 1424 aa23.58■■□□□ 1.37
ALKBH1-204ENST00000557057 FCHSD2O94868 740 aa23.57■■□□□ 1.36
ALKBH1-204ENST00000557057 STRCP1A6NGW2 1772 aa23.57■■□□□ 1.36
ALKBH1-204ENST00000557057 NEUROD2Q15784 382 aa23.57■■□□□ 1.36
ALKBH1-204ENST00000557057 SPINK5Q9NQ38 1064 aaPredicted RBP23.57■■□□□ 1.36
ALKBH1-204ENST00000557057 USP54Q70EL1 1684 aa23.56■■□□□ 1.36
ALKBH1-204ENST00000557057 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
ALKBH1-204ENST00000557057 LRRC7Q96NW7 1537 aa23.55■■□□□ 1.36
ALKBH1-204ENST00000557057 DMRT2Q9Y5R5 561 aa23.55■■□□□ 1.36
ALKBH1-204ENST00000557057 TMEM94Q12767 1356 aa23.55■■□□□ 1.36
ALKBH1-204ENST00000557057 RSPH6AQ9H0K4 717 aa23.55■■□□□ 1.36
ALKBH1-204ENST00000557057 NLRP6P59044 892 aa23.54■■□□□ 1.36
ALKBH1-204ENST00000557057 WDR63Q8IWG1 891 aa23.54■■□□□ 1.36
ALKBH1-204ENST00000557057 STRCQ7RTU9 1775 aa23.54■■□□□ 1.36
ALKBH1-204ENST00000557057 RRP1P56182 461 aaKnown RBP23.53■■□□□ 1.36
ALKBH1-204ENST00000557057 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 ABTB2Q8N961 1025 aa23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 DCCP43146 1447 aa23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 C1orf167Q5SNV9 1468 aa23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 PEAK1Q9H792 1746 aa23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 PAK3O75914 559 aaPredicted RBP23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 ORAI2Q96SN7 254 aa23.52■■□□□ 1.36
ALKBH1-204ENST00000557057 PSME1Q06323 249 aa23.51■■□□□ 1.35
ALKBH1-204ENST00000557057 MARF1Q9Y4F3 1742 aaKnown RBP23.51■■□□□ 1.35
ALKBH1-204ENST00000557057 MAP3K19Q56UN5 1328 aa23.51■■□□□ 1.35
ALKBH1-204ENST00000557057 PRKAR2BP31323 418 aa23.5■■□□□ 1.35
ALKBH1-204ENST00000557057 SOX12O15370 315 aa23.5■■□□□ 1.35
ALKBH1-204ENST00000557057 SBNO1A3KN83 1393 aa23.49■■□□□ 1.35
ALKBH1-204ENST00000557057 EIF4A2Q14240 407 aaKnown RBP23.49■■□□□ 1.35
ALKBH1-204ENST00000557057 HMOX1P09601 288 aa23.48■■□□□ 1.35
ALKBH1-204ENST00000557057 ATF3P18847 181 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 HSP90AB2PQ58FF8 381 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 FLT4P35916 1363 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 MST1RQ04912 1400 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 KIF1AQ12756 1690 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 NEFMP07197 916 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 NUTM2GQ5VZR2 741 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 PPP4R2Q9NY27 417 aa23.47■■□□□ 1.35
ALKBH1-204ENST00000557057 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 251.1 ms