RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 CCDC61Q9Y6R9 512 aa19.37■□□□□ 0.69
TMEM55B-207ENST00000557041 EFCAB6Q5THR3 1501 aa19.37■□□□□ 0.69
TMEM55B-207ENST00000557041 WASLO00401 505 aaPredicted RBP19.37■□□□□ 0.69
TMEM55B-207ENST00000557041 TRMT2AQ8IZ69 625 aaKnown RBP19.37■□□□□ 0.69
TMEM55B-207ENST00000557041 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
TMEM55B-207ENST00000557041 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
TMEM55B-207ENST00000557041 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
TMEM55B-207ENST00000557041 GZF1Q9H116 711 aaPredicted RBP19.35■□□□□ 0.69
TMEM55B-207ENST00000557041 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
TMEM55B-207ENST00000557041 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
TMEM55B-207ENST00000557041 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
TMEM55B-207ENST00000557041 MAP3K4Q9Y6R4 1608 aa19.34■□□□□ 0.69
TMEM55B-207ENST00000557041 MCM10Q7L590 875 aa19.34■□□□□ 0.69
TMEM55B-207ENST00000557041 TSPYL6Q8N831 410 aa19.34■□□□□ 0.69
TMEM55B-207ENST00000557041 SYNMO15061 1565 aa19.33■□□□□ 0.69
TMEM55B-207ENST00000557041 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.33■□□□□ 0.69
TMEM55B-207ENST00000557041 FCHSD2O94868 740 aa19.33■□□□□ 0.68
TMEM55B-207ENST00000557041 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
TMEM55B-207ENST00000557041 ABCA6Q8N139 1617 aa19.33■□□□□ 0.68
TMEM55B-207ENST00000557041 MLH3Q9UHC1 1453 aa19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 CEP152O94986 1710 aa19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 KIF1BO60333 1816 aa19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 TWISTNBQ3B726 338 aaPredicted RBP19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 MYOM2P54296 1465 aa19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 ABCA9Q8IUA7 1624 aa19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 KRT24Q2M2I5 525 aa19.32■□□□□ 0.68
TMEM55B-207ENST00000557041 PPRC1Q5VV67 1664 aaKnown RBP19.31■□□□□ 0.68
TMEM55B-207ENST00000557041 SBNO2Q9Y2G9 1366 aa19.3■□□□□ 0.68
TMEM55B-207ENST00000557041 CALD1Q05682 793 aaKnown RBP19.3■□□□□ 0.68
TMEM55B-207ENST00000557041 KIDINS220Q9ULH0 1771 aa19.3■□□□□ 0.68
TMEM55B-207ENST00000557041 ARAP3Q8WWN8 1544 aa19.29■□□□□ 0.68
TMEM55B-207ENST00000557041 GNAI1P63096 354 aa19.29■□□□□ 0.68
TMEM55B-207ENST00000557041 NFE2L2Q16236 605 aa19.29■□□□□ 0.68
TMEM55B-207ENST00000557041 ABCC3O15438 1527 aa19.29■□□□□ 0.68
TMEM55B-207ENST00000557041 INO80Q9ULG1 1556 aaPredicted RBP19.29■□□□□ 0.68
TMEM55B-207ENST00000557041 KIF16BQ96L93 1317 aa19.29■□□□□ 0.68
TMEM55B-207ENST00000557041 NLRP6P59044 892 aa19.28■□□□□ 0.68
TMEM55B-207ENST00000557041 HSP90AB2PQ58FF8 381 aa19.28■□□□□ 0.68
TMEM55B-207ENST00000557041 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
TMEM55B-207ENST00000557041 RIMS2Q9UQ26 1411 aa19.26■□□□□ 0.67
TMEM55B-207ENST00000557041 INSRP06213 1382 aa19.25■□□□□ 0.67
TMEM55B-207ENST00000557041 MBIPQ9NS73 344 aa19.25■□□□□ 0.67
TMEM55B-207ENST00000557041 HSP90AB1P08238 724 aaKnown RBP19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 TSPOAP1O95153 1857 aa19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 HECW2Q9P2P5 1572 aa19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 C22orf23Q9BZE7 217 aa19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 CCDC27Q2M243 656 aa19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
TMEM55B-207ENST00000557041 ACEP12821 1306 aa19.23■□□□□ 0.67
TMEM55B-207ENST00000557041 HSCBQ8IWL3 235 aa19.23■□□□□ 0.67
TMEM55B-207ENST00000557041 NSD2O96028 1365 aa19.23■□□□□ 0.67
TMEM55B-207ENST00000557041 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
TMEM55B-207ENST00000557041 PPIP5K1Q6PFW1 1433 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 ABCC11Q96J66 1382 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 TPRNQ4KMQ1 711 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 PLEKHF1Q96S99 279 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 RSPH6AQ9H0K4 717 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 NEO1Q92859 1461 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 XPCQ01831 940 aaPredicted RBP19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 METP08581 1390 aa19.22■□□□□ 0.67
TMEM55B-207ENST00000557041 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
TMEM55B-207ENST00000557041 IQGAP1P46940 1657 aa19.21■□□□□ 0.67
TMEM55B-207ENST00000557041 FOXO3O43524 673 aa19.2■□□□□ 0.66
TMEM55B-207ENST00000557041 LAMC1P11047 1609 aa19.2■□□□□ 0.66
TMEM55B-207ENST00000557041 GSE1Q14687 1217 aa19.2■□□□□ 0.66
TMEM55B-207ENST00000557041 IL27Q8NEV9 243 aa19.2■□□□□ 0.66
TMEM55B-207ENST00000557041 EIF2S2P20042 333 aaKnown RBP19.19■□□□□ 0.66
TMEM55B-207ENST00000557041 USHBP1Q8N6Y0 703 aa19.19■□□□□ 0.66
TMEM55B-207ENST00000557041 ABTB2Q8N961 1025 aa19.19■□□□□ 0.66
TMEM55B-207ENST00000557041 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
TMEM55B-207ENST00000557041 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
TMEM55B-207ENST00000557041 LTKP29376 864 aa19.18■□□□□ 0.66
TMEM55B-207ENST00000557041 PUS7Q96PZ0 661 aaKnown RBP19.18■□□□□ 0.66
TMEM55B-207ENST00000557041 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
TMEM55B-207ENST00000557041 F6X3S4 739 aa19.17■□□□□ 0.66
TMEM55B-207ENST00000557041 USP35Q9P2H5 1018 aa19.17■□□□□ 0.66
TMEM55B-207ENST00000557041 MROH2AA6NES4 1674 aa19.17■□□□□ 0.66
TMEM55B-207ENST00000557041 MROH1Q8NDA8 1641 aa19.17■□□□□ 0.66
TMEM55B-207ENST00000557041 STK31Q9BXU1 1019 aa19.16■□□□□ 0.66
TMEM55B-207ENST00000557041 NINLQ9Y2I6 1382 aa19.16■□□□□ 0.66
TMEM55B-207ENST00000557041 VAMP4O75379 141 aa19.16■□□□□ 0.66
TMEM55B-207ENST00000557041 EIF4A2Q14240 407 aaKnown RBP19.16■□□□□ 0.66
TMEM55B-207ENST00000557041 CHD1LQ86WJ1 897 aa19.16■□□□□ 0.66
TMEM55B-207ENST00000557041 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
TMEM55B-207ENST00000557041 CT47B1P0C2W7 299 aaPredicted RBP19.15■□□□□ 0.66
TMEM55B-207ENST00000557041 FKBP5Q13451 457 aaPredicted RBP19.15■□□□□ 0.66
TMEM55B-207ENST00000557041 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
TMEM55B-207ENST00000557041 BRPF3Q9ULD4 1205 aa19.15■□□□□ 0.66
TMEM55B-207ENST00000557041 IL13P35225 146 aa19.14■□□□□ 0.65
TMEM55B-207ENST00000557041 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
TMEM55B-207ENST00000557041 SMARCA5O60264 1052 aaPredicted RBP19.14■□□□□ 0.65
TMEM55B-207ENST00000557041 TULP4Q9NRJ4 1543 aa19.14■□□□□ 0.65
TMEM55B-207ENST00000557041 TNRQ92752 1358 aa19.13■□□□□ 0.65
TMEM55B-207ENST00000557041 GLI2P10070 1586 aa19.13■□□□□ 0.65
TMEM55B-207ENST00000557041 FRMPD1Q5SYB0 1578 aa19.13■□□□□ 0.65
TMEM55B-207ENST00000557041 VWDEQ8N2E2 1590 aa19.13■□□□□ 0.65
TMEM55B-207ENST00000557041 TTC21BQ7Z4L5 1316 aa19.13■□□□□ 0.65
TMEM55B-207ENST00000557041 TBC1D2Q9BYX2 928 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms