RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 GTF3C3Q9Y5Q9 886 aa18.5■□□□□ 0.55
EFCAB11-212ENST00000556639 POLR3AO14802 1390 aaPredicted RBP18.49■□□□□ 0.55
EFCAB11-212ENST00000556639 USP6P35125 1406 aa18.49■□□□□ 0.55
EFCAB11-212ENST00000556639 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
EFCAB11-212ENST00000556639 NRKQ7Z2Y5 1582 aa18.48■□□□□ 0.55
EFCAB11-212ENST00000556639 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
EFCAB11-212ENST00000556639 BLMP54132 1417 aaPredicted RBP18.47■□□□□ 0.55
EFCAB11-212ENST00000556639 TMEM94Q12767 1356 aa18.46■□□□□ 0.55
EFCAB11-212ENST00000556639 SSH2Q76I76 1423 aa18.46■□□□□ 0.55
EFCAB11-212ENST00000556639 SHPRHQ149N8 1683 aa18.46■□□□□ 0.55
EFCAB11-212ENST00000556639 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
EFCAB11-212ENST00000556639 ORAI2Q96SN7 254 aa18.45■□□□□ 0.54
EFCAB11-212ENST00000556639 COG3Q96JB2 828 aa18.45■□□□□ 0.54
EFCAB11-212ENST00000556639 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
EFCAB11-212ENST00000556639 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
EFCAB11-212ENST00000556639 POLKQ9UBT6 870 aa18.44■□□□□ 0.54
EFCAB11-212ENST00000556639 ZNF335Q9H4Z2 1342 aaPredicted RBP18.44■□□□□ 0.54
EFCAB11-212ENST00000556639 EMILIN1Q9Y6C2 1016 aa18.44■□□□□ 0.54
EFCAB11-212ENST00000556639 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
EFCAB11-212ENST00000556639 C19orf44Q9H6X5 657 aa18.43■□□□□ 0.54
EFCAB11-212ENST00000556639 MAP2P11137 1827 aaKnown RBP18.42■□□□□ 0.54
EFCAB11-212ENST00000556639 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
EFCAB11-212ENST00000556639 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
EFCAB11-212ENST00000556639 SOX12O15370 315 aa18.41■□□□□ 0.54
EFCAB11-212ENST00000556639 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
EFCAB11-212ENST00000556639 XPCQ01831 940 aaPredicted RBP18.4■□□□□ 0.54
EFCAB11-212ENST00000556639 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
EFCAB11-212ENST00000556639 OVOS2A0A0J9YW53 1432 aa18.39■□□□□ 0.53
EFCAB11-212ENST00000556639 OVOS2Q6IE36 1432 aa18.39■□□□□ 0.53
EFCAB11-212ENST00000556639 INSRP06213 1382 aa18.39■□□□□ 0.53
EFCAB11-212ENST00000556639 FOXO3O43524 673 aa18.38■□□□□ 0.53
EFCAB11-212ENST00000556639 APAF1O14727 1248 aa18.38■□□□□ 0.53
EFCAB11-212ENST00000556639 PIK3C2AO00443 1686 aa18.38■□□□□ 0.53
EFCAB11-212ENST00000556639 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
EFCAB11-212ENST00000556639 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
EFCAB11-212ENST00000556639 PNPLA6Q8IY17 1366 aa18.37■□□□□ 0.53
EFCAB11-212ENST00000556639 U2SURPO15042 1029 aaKnown RBP18.37■□□□□ 0.53
EFCAB11-212ENST00000556639 U2AF1L5P0DN76 240 aaPredicted RBP18.37■□□□□ 0.53
EFCAB11-212ENST00000556639 U2AF1Q01081 240 aaKnown RBP eCLIP18.37■□□□□ 0.53
EFCAB11-212ENST00000556639 C1orf167Q5SNV9 1468 aa18.36■□□□□ 0.53
EFCAB11-212ENST00000556639 ATF3P18847 181 aa18.36■□□□□ 0.53
EFCAB11-212ENST00000556639 CDCA7LQ96GN5 454 aa18.36■□□□□ 0.53
EFCAB11-212ENST00000556639 PSME1Q06323 249 aa18.35■□□□□ 0.53
EFCAB11-212ENST00000556639 AATKQ6ZMQ8 1374 aa18.35■□□□□ 0.53
EFCAB11-212ENST00000556639 NLRP6P59044 892 aa18.35■□□□□ 0.53
EFCAB11-212ENST00000556639 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
EFCAB11-212ENST00000556639 DDX17Q92841 729 aaKnown RBP18.35■□□□□ 0.53
EFCAB11-212ENST00000556639 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
EFCAB11-212ENST00000556639 LRRC7Q96NW7 1537 aa18.34■□□□□ 0.53
EFCAB11-212ENST00000556639 MST1RQ04912 1400 aa18.34■□□□□ 0.53
EFCAB11-212ENST00000556639 USP31Q70CQ4 1352 aa18.33■□□□□ 0.52
EFCAB11-212ENST00000556639 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
EFCAB11-212ENST00000556639 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
EFCAB11-212ENST00000556639 SUPT16HQ9Y5B9 1047 aaKnown RBP18.32■□□□□ 0.52
EFCAB11-212ENST00000556639 MARF1Q9Y4F3 1742 aaKnown RBP18.32■□□□□ 0.52
EFCAB11-212ENST00000556639 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
EFCAB11-212ENST00000556639 NCOA3Q9Y6Q9 1424 aa18.31■□□□□ 0.52
EFCAB11-212ENST00000556639 NEUROD2Q15784 382 aa18.31■□□□□ 0.52
EFCAB11-212ENST00000556639 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
EFCAB11-212ENST00000556639 MSH6P52701 1360 aa18.3■□□□□ 0.52
EFCAB11-212ENST00000556639 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
EFCAB11-212ENST00000556639 PEAK1Q9H792 1746 aa18.3■□□□□ 0.52
EFCAB11-212ENST00000556639 IL13P35225 146 aa18.29■□□□□ 0.52
EFCAB11-212ENST00000556639 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
EFCAB11-212ENST00000556639 HSP90AB2PQ58FF8 381 aa18.29■□□□□ 0.52
EFCAB11-212ENST00000556639 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
EFCAB11-212ENST00000556639 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
EFCAB11-212ENST00000556639 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
EFCAB11-212ENST00000556639 KRT28Q7Z3Y7 464 aa18.28■□□□□ 0.52
EFCAB11-212ENST00000556639 ZNF521Q96K83 1311 aa18.28■□□□□ 0.52
EFCAB11-212ENST00000556639 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
EFCAB11-212ENST00000556639 DCCP43146 1447 aa18.28■□□□□ 0.52
EFCAB11-212ENST00000556639 HMOX1P09601 288 aa18.27■□□□□ 0.52
EFCAB11-212ENST00000556639 LMOD2Q6P5Q4 547 aa18.27■□□□□ 0.52
EFCAB11-212ENST00000556639 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
EFCAB11-212ENST00000556639 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
EFCAB11-212ENST00000556639 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
EFCAB11-212ENST00000556639 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
EFCAB11-212ENST00000556639 TRPM3Q9HCF6 1732 aaPredicted RBP18.24■□□□□ 0.51
EFCAB11-212ENST00000556639 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
EFCAB11-212ENST00000556639 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
EFCAB11-212ENST00000556639 KIF1AQ12756 1690 aa18.23■□□□□ 0.51
EFCAB11-212ENST00000556639 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
EFCAB11-212ENST00000556639 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
EFCAB11-212ENST00000556639 FKBP8Q14318 412 aa18.22■□□□□ 0.51
EFCAB11-212ENST00000556639 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
EFCAB11-212ENST00000556639 AMPHP49418 695 aa18.22■□□□□ 0.51
EFCAB11-212ENST00000556639 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
EFCAB11-212ENST00000556639 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
EFCAB11-212ENST00000556639 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
EFCAB11-212ENST00000556639 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
EFCAB11-212ENST00000556639 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
EFCAB11-212ENST00000556639 SLAIN2Q9P270 581 aa18.21■□□□□ 0.51
EFCAB11-212ENST00000556639 ZBTB7CA1YPR0 619 aa18.2■□□□□ 0.5
EFCAB11-212ENST00000556639 FCHSD2O94868 740 aa18.2■□□□□ 0.5
EFCAB11-212ENST00000556639 SBNO1A3KN83 1393 aa18.2■□□□□ 0.5
EFCAB11-212ENST00000556639 HOXC9P31274 260 aa18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 TMPOP42166 694 aaKnown RBP18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
EFCAB11-212ENST00000556639 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms