RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-211ENST00000556272 CD109Q6YHK3 1445 aa9.61□□□□□ -0.87
PCNX1-211ENST00000556272 GLI2P10070 1586 aa9.61□□□□□ -0.87
PCNX1-211ENST00000556272 CFAP74Q9C0B2 1584 aa9.61□□□□□ -0.87
PCNX1-211ENST00000556272 ANP32AP39687 249 aaKnown RBP9.6□□□□□ -0.87
PCNX1-211ENST00000556272 SIRT1Q96EB6 747 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 DDRGK1Q96HY6 314 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
PCNX1-211ENST00000556272 SETBP1Q9Y6X0 1596 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 EFCAB6Q5THR3 1501 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 RGL3Q3MIN7 710 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.6□□□□□ -0.87
PCNX1-211ENST00000556272 PANK3Q9H999 370 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 NRXN1Q9ULB1 1477 aa9.6□□□□□ -0.87
PCNX1-211ENST00000556272 BRD1O95696 1058 aa9.59□□□□□ -0.87
PCNX1-211ENST00000556272 NGEFQ8N5V2 710 aa9.59□□□□□ -0.87
PCNX1-211ENST00000556272 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
PCNX1-211ENST00000556272 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
PCNX1-211ENST00000556272 ABCA6Q8N139 1617 aa9.58□□□□□ -0.88
PCNX1-211ENST00000556272 KCNA1Q09470 495 aa9.58□□□□□ -0.88
PCNX1-211ENST00000556272 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
PCNX1-211ENST00000556272 IVNS1ABPQ9Y6Y0 642 aa9.58□□□□□ -0.88
PCNX1-211ENST00000556272 ADGRL1O94910 1474 aa9.57□□□□□ -0.88
PCNX1-211ENST00000556272 TSPOAP1O95153 1857 aa9.57□□□□□ -0.88
PCNX1-211ENST00000556272 KNSTRNQ9Y448 316 aa9.57□□□□□ -0.88
PCNX1-211ENST00000556272 SND1Q7KZF4 910 aaKnown RBP eCLIP9.56□□□□□ -0.88
PCNX1-211ENST00000556272 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
PCNX1-211ENST00000556272 LOC102724159A0A0B4J2E5 919 aa9.56□□□□□ -0.88
PCNX1-211ENST00000556272 FAM69CQ0P6D2 419 aa9.56□□□□□ -0.88
PCNX1-211ENST00000556272 PWP2Q15269 919 aaKnown RBP9.56□□□□□ -0.88
PCNX1-211ENST00000556272 ZC3H13Q5T200 1668 aaKnown RBP9.56□□□□□ -0.88
PCNX1-211ENST00000556272 SMYD5Q6GMV2 418 aa9.56□□□□□ -0.88
PCNX1-211ENST00000556272 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
PCNX1-211ENST00000556272 ADGRB3O60242 1522 aa9.56□□□□□ -0.88
PCNX1-211ENST00000556272 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
PCNX1-211ENST00000556272 ZNF521Q96K83 1311 aa9.55□□□□□ -0.88
PCNX1-211ENST00000556272 PARP9Q8IXQ6 854 aa9.55□□□□□ -0.88
PCNX1-211ENST00000556272 ANKRD13AQ8IZ07 590 aa9.55□□□□□ -0.88
PCNX1-211ENST00000556272 EXOC6Q8TAG9 804 aa9.55□□□□□ -0.88
PCNX1-211ENST00000556272 KIDINS220Q9ULH0 1771 aa9.55□□□□□ -0.88
PCNX1-211ENST00000556272 CC2D1BQ5T0F9 858 aaKnown RBP9.55□□□□□ -0.88
PCNX1-211ENST00000556272 PPRC1Q5VV67 1664 aaKnown RBP9.55□□□□□ -0.88
PCNX1-211ENST00000556272 NEO1Q92859 1461 aa9.54□□□□□ -0.88
PCNX1-211ENST00000556272 PPP2R1AP30153 589 aa9.54□□□□□ -0.88
PCNX1-211ENST00000556272 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
PCNX1-211ENST00000556272 MRRFQ96E11 262 aaKnown RBP9.54□□□□□ -0.88
PCNX1-211ENST00000556272 ZNF518AQ6AHZ1 1483 aa9.54□□□□□ -0.88
PCNX1-211ENST00000556272 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
PCNX1-211ENST00000556272 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
PCNX1-211ENST00000556272 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
PCNX1-211ENST00000556272 NOL8Q76FK4 1167 aaKnown RBP9.53□□□□□ -0.88
PCNX1-211ENST00000556272 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
PCNX1-211ENST00000556272 PPLO60437 1756 aa9.53□□□□□ -0.88
PCNX1-211ENST00000556272 CANXP27824 592 aaKnown RBP9.53□□□□□ -0.88
PCNX1-211ENST00000556272 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
PCNX1-211ENST00000556272 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.53□□□□□ -0.88
PCNX1-211ENST00000556272 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
PCNX1-211ENST00000556272 MARCH6O60337 910 aa9.52□□□□□ -0.88
PCNX1-211ENST00000556272 GOPCQ9HD26 462 aa9.52□□□□□ -0.88
PCNX1-211ENST00000556272 RIPOR2Q9Y4F9 1068 aa9.52□□□□□ -0.88
PCNX1-211ENST00000556272 NINLQ9Y2I6 1382 aa9.52□□□□□ -0.88
PCNX1-211ENST00000556272 AFAP1Q8N556 730 aa9.52□□□□□ -0.89
PCNX1-211ENST00000556272 PRDM10Q9NQV6 1147 aa9.52□□□□□ -0.89
PCNX1-211ENST00000556272 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
PCNX1-211ENST00000556272 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
PCNX1-211ENST00000556272 BACH2Q9BYV9 841 aa9.52□□□□□ -0.89
PCNX1-211ENST00000556272 TXNDC2Q86VQ3 553 aa9.51□□□□□ -0.89
PCNX1-211ENST00000556272 POGZQ7Z3K3 1410 aa9.51□□□□□ -0.89
PCNX1-211ENST00000556272 TRMT2AQ8IZ69 625 aaKnown RBP9.51□□□□□ -0.89
PCNX1-211ENST00000556272 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
PCNX1-211ENST00000556272 HECW2Q9P2P5 1572 aa9.51□□□□□ -0.89
PCNX1-211ENST00000556272 RICTORQ6R327 1708 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 MLH3Q9UHC1 1453 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 GOLGA2Q08379 1002 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 PLEKHH1Q9ULM0 1364 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 PDE4AP27815 886 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 DUSP27Q5VZP5 1158 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 DRC1Q96MC2 740 aa9.5□□□□□ -0.89
PCNX1-211ENST00000556272 NKTRP30414 1462 aaKnown RBP9.5□□□□□ -0.89
PCNX1-211ENST00000556272 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-211ENST00000556272 ANKRD62A6NC57 917 aa9.49□□□□□ -0.89
PCNX1-211ENST00000556272 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
PCNX1-211ENST00000556272 CENPQQ7L2Z9 268 aaPredicted RBP9.49□□□□□ -0.89
PCNX1-211ENST00000556272 KDM2BQ8NHM5 1336 aa9.49□□□□□ -0.89
PCNX1-211ENST00000556272 QRICH2Q9H0J4 1663 aa9.49□□□□□ -0.89
PCNX1-211ENST00000556272 GSE1Q14687 1217 aa9.49□□□□□ -0.89
PCNX1-211ENST00000556272 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
PCNX1-211ENST00000556272 RPGRIP1LQ68CZ1 1315 aa9.48□□□□□ -0.89
PCNX1-211ENST00000556272 KDM4FA0A1W2PPD8 638 aa9.48□□□□□ -0.89
PCNX1-211ENST00000556272 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
PCNX1-211ENST00000556272 PIK3C2BO00750 1634 aa9.48□□□□□ -0.89
PCNX1-211ENST00000556272 GIMAP6Q6P9H5 292 aa9.48□□□□□ -0.89
PCNX1-211ENST00000556272 SHPRHQ149N8 1683 aa9.48□□□□□ -0.89
PCNX1-211ENST00000556272 ADGRB1O14514 1584 aa9.47□□□□□ -0.89
PCNX1-211ENST00000556272 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
PCNX1-211ENST00000556272 SGIP1Q9BQI5 828 aa9.47□□□□□ -0.89
PCNX1-211ENST00000556272 FRMPD1Q5SYB0 1578 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms