RNA–Protein interactions for RNA: ENST00000556245.1

PRKCH-221, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-221ENST00000556245 C8orf34Q49A92 452 aa15□□□□□ -0.01
PRKCH-221ENST00000556245 PLEKHF1Q96S99 279 aa15□□□□□ -0.01
PRKCH-221ENST00000556245 CABP1Q9NZU7 370 aa15□□□□□ -0.01
PRKCH-221ENST00000556245 IGHDP01880 384 aa14.99□□□□□ -0.01
PRKCH-221ENST00000556245 PMFBP1Q8TBY8 1022 aa14.99□□□□□ -0.01
PRKCH-221ENST00000556245 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
PRKCH-221ENST00000556245 ATP7BP35670 1465 aa14.98□□□□□ -0.01
PRKCH-221ENST00000556245 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
PRKCH-221ENST00000556245 PNPLA6Q8IY17 1366 aa14.97□□□□□ -0.01
PRKCH-221ENST00000556245 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.97□□□□□ -0.01
PRKCH-221ENST00000556245 IL16Q14005 1332 aa14.97□□□□□ -0.01
PRKCH-221ENST00000556245 SETD1AO15047 1707 aaKnown RBP14.97□□□□□ -0.01
PRKCH-221ENST00000556245 MLECQ14165 292 aa14.96□□□□□ -0.01
PRKCH-221ENST00000556245 BCL2L13Q9BXK5 485 aa14.96□□□□□ -0.01
PRKCH-221ENST00000556245 ESF1Q9H501 851 aaKnown RBP14.95□□□□□ -0.02
PRKCH-221ENST00000556245 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
PRKCH-221ENST00000556245 ZKSCAN2Q63HK3 967 aa14.95□□□□□ -0.02
PRKCH-221ENST00000556245 WAPLQ7Z5K2 1190 aa14.94□□□□□ -0.02
PRKCH-221ENST00000556245 DAXXQ9UER7 740 aaPredicted RBP14.94□□□□□ -0.02
PRKCH-221ENST00000556245 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
PRKCH-221ENST00000556245 RLBP1P12271 317 aa14.94□□□□□ -0.02
PRKCH-221ENST00000556245 NEFMP07197 916 aa14.94□□□□□ -0.02
PRKCH-221ENST00000556245 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
PRKCH-221ENST00000556245 CDC42BPGQ6DT37 1551 aa14.93□□□□□ -0.02
PRKCH-221ENST00000556245 FCHSD2O94868 740 aa14.93□□□□□ -0.02
PRKCH-221ENST00000556245 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 RIPK4P57078 832 aa14.93□□□□□ -0.02
PRKCH-221ENST00000556245 TSR2Q969E8 191 aaKnown RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 RWDD1Q9H446 243 aaPredicted RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 VIRMAQ69YN4 1812 aaKnown RBP14.93□□□□□ -0.02
PRKCH-221ENST00000556245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.92□□□□□ -0.02
PRKCH-221ENST00000556245 DZIP1LQ8IYY4 767 aaKnown RBP14.92□□□□□ -0.02
PRKCH-221ENST00000556245 SMC4Q9NTJ3 1288 aa14.92□□□□□ -0.02
PRKCH-221ENST00000556245 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
PRKCH-221ENST00000556245 WASLO00401 505 aaPredicted RBP14.91□□□□□ -0.02
PRKCH-221ENST00000556245 TNNQ9UQP3 1299 aa14.91□□□□□ -0.02
PRKCH-221ENST00000556245 NRXN3Q9Y4C0 1643 aa14.91□□□□□ -0.02
PRKCH-221ENST00000556245 EDC4Q6P2E9 1401 aaKnown RBP14.91□□□□□ -0.02
PRKCH-221ENST00000556245 ZMYM3Q14202 1370 aa14.91□□□□□ -0.02
PRKCH-221ENST00000556245 LAS1LQ9Y4W2 734 aaKnown RBP14.91□□□□□ -0.02
PRKCH-221ENST00000556245 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
PRKCH-221ENST00000556245 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
PRKCH-221ENST00000556245 SIRT1Q96EB6 747 aa14.9□□□□□ -0.02
PRKCH-221ENST00000556245 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
PRKCH-221ENST00000556245 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
PRKCH-221ENST00000556245 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
PRKCH-221ENST00000556245 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
PRKCH-221ENST00000556245 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
PRKCH-221ENST00000556245 METP08581 1390 aa14.88□□□□□ -0.03
PRKCH-221ENST00000556245 SSH1Q8WYL5 1049 aa14.87□□□□□ -0.03
PRKCH-221ENST00000556245 RSPH6AQ9H0K4 717 aa14.87□□□□□ -0.03
PRKCH-221ENST00000556245 DDX19BQ9UMR2 479 aa14.87□□□□□ -0.03
PRKCH-221ENST00000556245 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
PRKCH-221ENST00000556245 TECPR2O15040 1411 aa14.87□□□□□ -0.03
PRKCH-221ENST00000556245 PRKAR2BP31323 418 aa14.87□□□□□ -0.03
PRKCH-221ENST00000556245 KIF16BQ96L93 1317 aa14.87□□□□□ -0.03
PRKCH-221ENST00000556245 IPO8O15397 1037 aaKnown RBP14.86□□□□□ -0.03
PRKCH-221ENST00000556245 ATF7IPQ6VMQ6 1270 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 TRIM27P14373 513 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 CALD1Q05682 793 aaKnown RBP14.86□□□□□ -0.03
PRKCH-221ENST00000556245 TXNDC2Q86VQ3 553 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 PDZRN3Q9UPQ7 1066 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 KIF13AQ9H1H9 1805 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 TNRQ92752 1358 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
PRKCH-221ENST00000556245 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
PRKCH-221ENST00000556245 CDK12Q9NYV4 1490 aaPredicted RBP14.86□□□□□ -0.03
PRKCH-221ENST00000556245 ALDH1L2Q3SY69 923 aa14.85□□□□□ -0.03
PRKCH-221ENST00000556245 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
PRKCH-221ENST00000556245 CPS1P31327 1500 aa14.85□□□□□ -0.03
PRKCH-221ENST00000556245 NFE2L2Q16236 605 aa14.84□□□□□ -0.03
PRKCH-221ENST00000556245 COG3Q96JB2 828 aa14.84□□□□□ -0.03
PRKCH-221ENST00000556245 NME9Q86XW9 330 aa14.84□□□□□ -0.03
PRKCH-221ENST00000556245 ITPRIPQ8IWB1 547 aa14.84□□□□□ -0.03
PRKCH-221ENST00000556245 NOB1Q9ULX3 412 aaKnown RBP14.84□□□□□ -0.03
PRKCH-221ENST00000556245 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.03
PRKCH-221ENST00000556245 FBLN1P23142 703 aa14.83□□□□□ -0.04
PRKCH-221ENST00000556245 ZNF692Q9BU19 519 aaPredicted RBP14.83□□□□□ -0.04
PRKCH-221ENST00000556245 TMEM2Q9UHN6 1383 aa14.83□□□□□ -0.04
PRKCH-221ENST00000556245 SLC4A3P48751 1232 aa14.82□□□□□ -0.04
PRKCH-221ENST00000556245 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
PRKCH-221ENST00000556245 EMILIN1Q9Y6C2 1016 aa14.82□□□□□ -0.04
PRKCH-221ENST00000556245 IL13P35225 146 aa14.82□□□□□ -0.04
PRKCH-221ENST00000556245 UPF2Q9HAU5 1272 aaKnown RBP14.82□□□□□ -0.04
PRKCH-221ENST00000556245 ITSN1Q15811 1721 aa14.82□□□□□ -0.04
PRKCH-221ENST00000556245 HMOX1P09601 288 aa14.81□□□□□ -0.04
PRKCH-221ENST00000556245 AKAP12Q02952 1782 aa14.81□□□□□ -0.04
PRKCH-221ENST00000556245 UBR1Q8IWV7 1749 aa14.81□□□□□ -0.04
PRKCH-221ENST00000556245 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
PRKCH-221ENST00000556245 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
PRKCH-221ENST00000556245 USP19O94966 1318 aa14.8□□□□□ -0.04
PRKCH-221ENST00000556245 GNAI1P63096 354 aa14.8□□□□□ -0.04
PRKCH-221ENST00000556245 TMEM57Q8N5G2 664 aa14.79□□□□□ -0.04
PRKCH-221ENST00000556245 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
PRKCH-221ENST00000556245 BCL11AQ9H165 835 aa14.79□□□□□ -0.04
PRKCH-221ENST00000556245 C3P01024 1663 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms