RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 NLRP6P59044 892 aa18.57■□□□□ 0.56
NEK9-209ENST00000556170 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
NEK9-209ENST00000556170 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
NEK9-209ENST00000556170 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
NEK9-209ENST00000556170 ERVK-7P63135 1459 aa18.56■□□□□ 0.56
NEK9-209ENST00000556170 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
NEK9-209ENST00000556170 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
NEK9-209ENST00000556170 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
NEK9-209ENST00000556170 TRPM1Q7Z4N2 1603 aa18.55■□□□□ 0.56
NEK9-209ENST00000556170 SEC24BO95487 1268 aa18.54■□□□□ 0.56
NEK9-209ENST00000556170 NFE2L2Q16236 605 aa18.54■□□□□ 0.56
NEK9-209ENST00000556170 MCM10Q7L590 875 aa18.54■□□□□ 0.56
NEK9-209ENST00000556170 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
NEK9-209ENST00000556170 PHACTR3Q96KR7 559 aa18.53■□□□□ 0.56
NEK9-209ENST00000556170 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
NEK9-209ENST00000556170 ZNF521Q96K83 1311 aa18.53■□□□□ 0.56
NEK9-209ENST00000556170 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
NEK9-209ENST00000556170 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
NEK9-209ENST00000556170 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
NEK9-209ENST00000556170 TRPM2O94759 1503 aa18.52■□□□□ 0.56
NEK9-209ENST00000556170 YEATS2Q9ULM3 1422 aa18.52■□□□□ 0.56
NEK9-209ENST00000556170 API5Q9BZZ5 524 aaKnown RBP18.52■□□□□ 0.56
NEK9-209ENST00000556170 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.55
NEK9-209ENST00000556170 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
NEK9-209ENST00000556170 KDM2BQ8NHM5 1336 aa18.51■□□□□ 0.55
NEK9-209ENST00000556170 POGZQ7Z3K3 1410 aa18.51■□□□□ 0.55
NEK9-209ENST00000556170 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
NEK9-209ENST00000556170 AAMPQ13685 434 aa18.49■□□□□ 0.55
NEK9-209ENST00000556170 PLXNC1O60486 1568 aa18.49■□□□□ 0.55
NEK9-209ENST00000556170 TRIM6-TRIM34B2RNG4 842 aa18.49■□□□□ 0.55
NEK9-209ENST00000556170 GOLGA6L22H0YM25 854 aa18.49■□□□□ 0.55
NEK9-209ENST00000556170 UNC13BO14795 1591 aa18.49■□□□□ 0.55
NEK9-209ENST00000556170 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
NEK9-209ENST00000556170 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
NEK9-209ENST00000556170 SLC4A2P04920 1241 aa18.48■□□□□ 0.55
NEK9-209ENST00000556170 AEBP1Q8IUX7 1158 aa18.48■□□□□ 0.55
NEK9-209ENST00000556170 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
NEK9-209ENST00000556170 CT47B1P0C2W7 299 aaPredicted RBP18.47■□□□□ 0.55
NEK9-209ENST00000556170 ZNF692Q9BU19 519 aaPredicted RBP18.47■□□□□ 0.55
NEK9-209ENST00000556170 NINLQ9Y2I6 1382 aa18.47■□□□□ 0.55
NEK9-209ENST00000556170 CLTCL1P53675 1640 aa18.47■□□□□ 0.55
NEK9-209ENST00000556170 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
NEK9-209ENST00000556170 ABTB2Q8N961 1025 aa18.47■□□□□ 0.55
NEK9-209ENST00000556170 A0A0G2JS52 829 aa18.46■□□□□ 0.55
NEK9-209ENST00000556170 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.55
NEK9-209ENST00000556170 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.55
NEK9-209ENST00000556170 TRIM35Q9UPQ4 493 aa18.46■□□□□ 0.55
NEK9-209ENST00000556170 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
NEK9-209ENST00000556170 NSD2O96028 1365 aa18.45■□□□□ 0.54
NEK9-209ENST00000556170 HSP90AB2PQ58FF8 381 aa18.45■□□□□ 0.54
NEK9-209ENST00000556170 KRT24Q2M2I5 525 aa18.45■□□□□ 0.54
NEK9-209ENST00000556170 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
NEK9-209ENST00000556170 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
NEK9-209ENST00000556170 HMMRO75330 724 aa18.44■□□□□ 0.54
NEK9-209ENST00000556170 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
NEK9-209ENST00000556170 YTHDC2Q9H6S0 1430 aaKnown RBP18.44■□□□□ 0.54
NEK9-209ENST00000556170 BRPF3Q9ULD4 1205 aa18.44■□□□□ 0.54
NEK9-209ENST00000556170 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
NEK9-209ENST00000556170 PSME1Q06323 249 aa18.42■□□□□ 0.54
NEK9-209ENST00000556170 PKNOX2Q96KN3 472 aa18.42■□□□□ 0.54
NEK9-209ENST00000556170 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
NEK9-209ENST00000556170 C8orf58Q8NAV2 365 aa18.42■□□□□ 0.54
NEK9-209ENST00000556170 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
NEK9-209ENST00000556170 ACEP12821 1306 aa18.41■□□□□ 0.54
NEK9-209ENST00000556170 NAP1L5Q96NT1 182 aaPredicted RBP18.41■□□□□ 0.54
NEK9-209ENST00000556170 E9PCH4 1651 aa18.41■□□□□ 0.54
NEK9-209ENST00000556170 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
NEK9-209ENST00000556170 SBNO2Q9Y2G9 1366 aa18.4■□□□□ 0.54
NEK9-209ENST00000556170 F6X3S4 739 aa18.4■□□□□ 0.54
NEK9-209ENST00000556170 RIMS2Q9UQ26 1411 aa18.39■□□□□ 0.54
NEK9-209ENST00000556170 INSRP06213 1382 aa18.39■□□□□ 0.53
NEK9-209ENST00000556170 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
NEK9-209ENST00000556170 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
NEK9-209ENST00000556170 FOXD4L6Q3SYB3 417 aaPredicted RBP18.39■□□□□ 0.53
NEK9-209ENST00000556170 FOXD4L3Q6VB84 417 aaPredicted RBP18.39■□□□□ 0.53
NEK9-209ENST00000556170 TRIM44Q96DX7 344 aaPredicted RBP18.39■□□□□ 0.53
NEK9-209ENST00000556170 TEFQ10587 303 aa18.38■□□□□ 0.53
NEK9-209ENST00000556170 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
NEK9-209ENST00000556170 TBC1D2Q9BYX2 928 aa18.38■□□□□ 0.53
NEK9-209ENST00000556170 ABCC11Q96J66 1382 aa18.38■□□□□ 0.53
NEK9-209ENST00000556170 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
NEK9-209ENST00000556170 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
NEK9-209ENST00000556170 CHMP5Q9NZZ3 219 aa18.37■□□□□ 0.53
NEK9-209ENST00000556170 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
NEK9-209ENST00000556170 PPIP5K1Q6PFW1 1433 aa18.37■□□□□ 0.53
NEK9-209ENST00000556170 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
NEK9-209ENST00000556170 RSPH6AQ9H0K4 717 aa18.37■□□□□ 0.53
NEK9-209ENST00000556170 ALDH1L2Q3SY69 923 aa18.36■□□□□ 0.53
NEK9-209ENST00000556170 GBP4Q96PP9 640 aa18.36■□□□□ 0.53
NEK9-209ENST00000556170 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
NEK9-209ENST00000556170 MADDQ8WXG6 1647 aa18.36■□□□□ 0.53
NEK9-209ENST00000556170 KCNJ4P48050 445 aa18.36■□□□□ 0.53
NEK9-209ENST00000556170 SYNMO15061 1565 aa18.36■□□□□ 0.53
NEK9-209ENST00000556170 MYOM2P54296 1465 aa18.35■□□□□ 0.53
NEK9-209ENST00000556170 VAMP4O75379 141 aa18.35■□□□□ 0.53
NEK9-209ENST00000556170 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
NEK9-209ENST00000556170 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
NEK9-209ENST00000556170 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
NEK9-209ENST00000556170 FOXO3O43524 673 aa18.35■□□□□ 0.53
NEK9-209ENST00000556170 TET3O43151 1660 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms