RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
SLIRP-204ENST00000555890 KIF3BO15066 747 aa9.93□□□□□ -0.82
SLIRP-204ENST00000555890 PTCH1Q13635 1447 aa9.92□□□□□ -0.82
SLIRP-204ENST00000555890 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-204ENST00000555890 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-204ENST00000555890 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
SLIRP-204ENST00000555890 PARD3Q8TEW0 1356 aa9.91□□□□□ -0.82
SLIRP-204ENST00000555890 WASHC2CQ9Y4E1 1318 aa9.91□□□□□ -0.82
SLIRP-204ENST00000555890 ATF3P18847 181 aa9.91□□□□□ -0.82
SLIRP-204ENST00000555890 PLEKHH2Q8IVE3 1493 aa9.91□□□□□ -0.82
SLIRP-204ENST00000555890 UBR1Q8IWV7 1749 aa9.9□□□□□ -0.82
SLIRP-204ENST00000555890 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
SLIRP-204ENST00000555890 ARXQ96QS3 562 aa9.9□□□□□ -0.82
SLIRP-204ENST00000555890 CFDP1Q9UEE9 299 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-204ENST00000555890 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
SLIRP-204ENST00000555890 HFM1A2PYH4 1435 aa9.9□□□□□ -0.83
SLIRP-204ENST00000555890 SLIT1O75093 1534 aa9.89□□□□□ -0.83
SLIRP-204ENST00000555890 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
SLIRP-204ENST00000555890 C14orf37Q86TY3 774 aa9.89□□□□□ -0.83
SLIRP-204ENST00000555890 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
SLIRP-204ENST00000555890 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
SLIRP-204ENST00000555890 EID1Q9Y6B2 187 aa9.89□□□□□ -0.83
SLIRP-204ENST00000555890 GCC2Q8IWJ2 1684 aa9.89□□□□□ -0.83
SLIRP-204ENST00000555890 DLC1Q96QB1 1528 aa9.88□□□□□ -0.83
SLIRP-204ENST00000555890 PPP1R15AO75807 674 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-204ENST00000555890 PTGER2P43116 358 aa9.88□□□□□ -0.83
SLIRP-204ENST00000555890 ABHD8Q96I13 439 aa9.88□□□□□ -0.83
SLIRP-204ENST00000555890 NRKQ7Z2Y5 1582 aa9.88□□□□□ -0.83
SLIRP-204ENST00000555890 CFAP65Q6ZU64 1925 aaKnown RBP9.88□□□□□ -0.83
SLIRP-204ENST00000555890 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
SLIRP-204ENST00000555890 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-204ENST00000555890 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-204ENST00000555890 HTRA3P83110 453 aa9.87□□□□□ -0.83
SLIRP-204ENST00000555890 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
SLIRP-204ENST00000555890 KIF3CO14782 793 aa9.86□□□□□ -0.83
SLIRP-204ENST00000555890 DAPK1P53355 1430 aa9.86□□□□□ -0.83
SLIRP-204ENST00000555890 NAIPQ13075 1403 aa9.86□□□□□ -0.83
SLIRP-204ENST00000555890 CREBZFQ9NS37 354 aa9.86□□□□□ -0.83
SLIRP-204ENST00000555890 TET3O43151 1660 aa9.86□□□□□ -0.83
SLIRP-204ENST00000555890 KDM5AP29375 1690 aaKnown RBP9.86□□□□□ -0.83
SLIRP-204ENST00000555890 ROCK1Q13464 1354 aa9.86□□□□□ -0.83
SLIRP-204ENST00000555890 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
SLIRP-204ENST00000555890 MAMSTRQ6ZN01 415 aa9.85□□□□□ -0.83
SLIRP-204ENST00000555890 UNC5CLQ8IV45 518 aa9.85□□□□□ -0.83
SLIRP-204ENST00000555890 C19orf44Q9H6X5 657 aa9.85□□□□□ -0.83
SLIRP-204ENST00000555890 CHIC2Q9UKJ5 165 aa9.85□□□□□ -0.83
SLIRP-204ENST00000555890 ABCC5O15440 1437 aa9.84□□□□□ -0.83
SLIRP-204ENST00000555890 NCOA3Q9Y6Q9 1424 aa9.84□□□□□ -0.83
SLIRP-204ENST00000555890 TOMM70O94826 608 aa9.84□□□□□ -0.83
SLIRP-204ENST00000555890 PELP1Q8IZL8 1130 aaKnown RBP9.84□□□□□ -0.83
SLIRP-204ENST00000555890 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 MROH1Q8NDA8 1641 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 ZBTB7AO95365 584 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 RASEFQ8IZ41 740 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 SLC26A8Q96RN1 970 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 PRDM10Q9NQV6 1147 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 RRP7BPQ9NSQ0 103 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 WDR70Q9NW82 654 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 BRWD3Q6RI45 1802 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 GLI3P10071 1580 aa9.83□□□□□ -0.84
SLIRP-204ENST00000555890 GRIN3BO60391 1043 aa9.82□□□□□ -0.84
SLIRP-204ENST00000555890 APBA3O96018 575 aa9.82□□□□□ -0.84
SLIRP-204ENST00000555890 MAST1Q9Y2H9 1570 aa9.82□□□□□ -0.84
SLIRP-204ENST00000555890 TMEM2Q9UHN6 1383 aa9.81□□□□□ -0.84
SLIRP-204ENST00000555890 CCDC85CA6NKD9 419 aa9.81□□□□□ -0.84
SLIRP-204ENST00000555890 RSPH4AQ5TD94 716 aa9.81□□□□□ -0.84
SLIRP-204ENST00000555890 ARHGEF5Q12774 1597 aa9.8□□□□□ -0.84
SLIRP-204ENST00000555890 MAP3K5Q99683 1374 aa9.8□□□□□ -0.84
SLIRP-204ENST00000555890 RGPD1P0DJD0 1748 aa9.8□□□□□ -0.84
SLIRP-204ENST00000555890 A0A0G2JS52 829 aa9.8□□□□□ -0.84
SLIRP-204ENST00000555890 MYT1Q01538 1121 aa9.8□□□□□ -0.84
SLIRP-204ENST00000555890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.8□□□□□ -0.84
SLIRP-204ENST00000555890 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 TSPY4P0CV99 314 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 TSPY10P0CW01 314 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 PYGBP11216 843 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 PRPF38BQ5VTL8 546 aaKnown RBP9.79□□□□□ -0.84
SLIRP-204ENST00000555890 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 KCNV2Q8TDN2 545 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 MYOM1P52179 1685 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 ADGRL2O95490 1459 aa9.79□□□□□ -0.84
SLIRP-204ENST00000555890 ASXL1Q8IXJ9 1541 aa9.78□□□□□ -0.84
SLIRP-204ENST00000555890 CUL9Q8IWT3 2517 aa9.78□□□□□ -0.84
SLIRP-204ENST00000555890 DDX17Q92841 729 aaKnown RBP9.78□□□□□ -0.84
SLIRP-204ENST00000555890 FAM163AQ96GL9 167 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-204ENST00000555890 WDR90Q96KV7 1748 aa9.78□□□□□ -0.84
SLIRP-204ENST00000555890 PDE4DIPQ5VU43 2346 aa9.78□□□□□ -0.84
SLIRP-204ENST00000555890 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-204ENST00000555890 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
SLIRP-204ENST00000555890 METRNQ9UJH8 293 aa9.77□□□□□ -0.85
SLIRP-204ENST00000555890 PIK3C2BO00750 1634 aa9.77□□□□□ -0.85
SLIRP-204ENST00000555890 CCDC141Q6ZP82 1450 aa9.77□□□□□ -0.85
SLIRP-204ENST00000555890 ARHGAP31Q2M1Z3 1444 aa9.76□□□□□ -0.85
SLIRP-204ENST00000555890 GOLGB1Q14789 3259 aaKnown RBP9.76□□□□□ -0.85
SLIRP-204ENST00000555890 C7P10643 843 aa9.76□□□□□ -0.85
SLIRP-204ENST00000555890 CHD2O14647 1828 aaKnown RBP9.76□□□□□ -0.85
SLIRP-204ENST00000555890 CEP152O94986 1710 aa9.76□□□□□ -0.85
SLIRP-204ENST00000555890 ADGRB2O60241 1585 aa9.75□□□□□ -0.85
SLIRP-204ENST00000555890 TNRC18O15417 2968 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-204ENST00000555890 TRIM37O94972 964 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms