RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
EFCAB11-208ENST00000555872 RIPK4P57078 832 aa12.95□□□□□ -0.34
EFCAB11-208ENST00000555872 SLC20A2Q08357 652 aa12.95□□□□□ -0.34
EFCAB11-208ENST00000555872 UNC13BO14795 1591 aa12.95□□□□□ -0.34
EFCAB11-208ENST00000555872 LETM1O95202 739 aaPredicted RBP12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 TRAPPC8Q9Y2L5 1435 aa12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 NLRP13Q86W25 1043 aa12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 GEMIN8Q9NWZ8 242 aaKnown RBP12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
EFCAB11-208ENST00000555872 MAFGO15525 162 aa12.93□□□□□ -0.34
EFCAB11-208ENST00000555872 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
EFCAB11-208ENST00000555872 KDM5CP41229 1560 aa12.93□□□□□ -0.34
EFCAB11-208ENST00000555872 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 FAM13BQ9NYF5 915 aa12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 CGNQ9P2M7 1197 aaKnown RBP12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 ZNF518AQ6AHZ1 1483 aa12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 ATP7AQ04656 1500 aa12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 PZPP20742 1482 aa12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
EFCAB11-208ENST00000555872 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
EFCAB11-208ENST00000555872 STK26Q9P289 416 aa12.91□□□□□ -0.34
EFCAB11-208ENST00000555872 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
EFCAB11-208ENST00000555872 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
EFCAB11-208ENST00000555872 YY1AP1Q9H869 796 aa12.9□□□□□ -0.34
EFCAB11-208ENST00000555872 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
EFCAB11-208ENST00000555872 MLECQ14165 292 aa12.9□□□□□ -0.34
EFCAB11-208ENST00000555872 CEP120Q8N960 986 aa12.9□□□□□ -0.35
EFCAB11-208ENST00000555872 IQGAP3Q86VI3 1631 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 LOC102724159A0A0B4J2E5 919 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 PWP2Q15269 919 aaKnown RBP12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 POGZQ7Z3K3 1410 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 SPAG9O60271 1321 aaKnown RBP12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
EFCAB11-208ENST00000555872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
EFCAB11-208ENST00000555872 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
EFCAB11-208ENST00000555872 ZNF500O60304 480 aaPredicted RBP12.88□□□□□ -0.35
EFCAB11-208ENST00000555872 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
EFCAB11-208ENST00000555872 TSPOAP1O95153 1857 aa12.88□□□□□ -0.35
EFCAB11-208ENST00000555872 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
EFCAB11-208ENST00000555872 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
EFCAB11-208ENST00000555872 NBPF11Q86T75 865 aa12.87□□□□□ -0.35
EFCAB11-208ENST00000555872 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.87□□□□□ -0.35
EFCAB11-208ENST00000555872 IGHDP01880 384 aa12.87□□□□□ -0.35
EFCAB11-208ENST00000555872 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
EFCAB11-208ENST00000555872 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
EFCAB11-208ENST00000555872 ST20-MTHFSA0A0A6YYL1 179 aa12.85□□□□□ -0.35
EFCAB11-208ENST00000555872 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
EFCAB11-208ENST00000555872 FAM135AQ9P2D6 1515 aa12.85□□□□□ -0.35
EFCAB11-208ENST00000555872 TTC36A6NLP5 189 aa12.85□□□□□ -0.35
EFCAB11-208ENST00000555872 GAS2L3Q86XJ1 694 aa12.85□□□□□ -0.35
EFCAB11-208ENST00000555872 NLRP1Q9C000 1473 aa12.85□□□□□ -0.35
EFCAB11-208ENST00000555872 OFD1O75665 1012 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 AFAP1Q8N556 730 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 RNF217Q8TC41 542 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
EFCAB11-208ENST00000555872 NUP155O75694 1391 aa12.83□□□□□ -0.35
EFCAB11-208ENST00000555872 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
EFCAB11-208ENST00000555872 PARD3Q8TEW0 1356 aa12.83□□□□□ -0.36
EFCAB11-208ENST00000555872 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 GOLIM4O00461 696 aa12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 ZMYM4Q5VZL5 1548 aa12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 ZSCAN30Q86W11 494 aa12.82□□□□□ -0.36
EFCAB11-208ENST00000555872 BLMP54132 1417 aaPredicted RBP12.81□□□□□ -0.36
EFCAB11-208ENST00000555872 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
EFCAB11-208ENST00000555872 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
EFCAB11-208ENST00000555872 RNF17Q9BXT8 1623 aaKnown RBP12.81□□□□□ -0.36
EFCAB11-208ENST00000555872 KDM4AO75164 1064 aa12.81□□□□□ -0.36
EFCAB11-208ENST00000555872 MSNP26038 577 aaKnown RBP12.81□□□□□ -0.36
EFCAB11-208ENST00000555872 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 FRMPD1Q5SYB0 1578 aa12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 KCNJ4P48050 445 aa12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
EFCAB11-208ENST00000555872 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
EFCAB11-208ENST00000555872 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
EFCAB11-208ENST00000555872 CT47A1Q5JQC4 288 aaPredicted RBP12.79□□□□□ -0.36
EFCAB11-208ENST00000555872 TET3O43151 1660 aa12.79□□□□□ -0.36
EFCAB11-208ENST00000555872 TERF1P54274 439 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 SGSM3Q96HU1 749 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 EIF3AQ14152 1382 aaKnown RBP12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 YEATS2Q9ULM3 1422 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 ATP10AO60312 1499 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 A2MP01023 1474 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 BCAR3O75815 825 aa12.78□□□□□ -0.36
EFCAB11-208ENST00000555872 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms