RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 RUNDC1Q96C34 613 aa24.28■■□□□ 1.48
GABRB3-209ENST00000555632 TCP11L2Q8N4U5 519 aa24.27■■□□□ 1.48
GABRB3-209ENST00000555632 KCNA6P17658 529 aa24.26■■□□□ 1.47
GABRB3-209ENST00000555632 DIP2AQ14689 1571 aa24.26■■□□□ 1.47
GABRB3-209ENST00000555632 PTCH1Q13635 1447 aa24.26■■□□□ 1.47
GABRB3-209ENST00000555632 MON2Q7Z3U7 1717 aa24.26■■□□□ 1.47
GABRB3-209ENST00000555632 IQSEC2Q5JU85 1478 aa24.25■■□□□ 1.47
GABRB3-209ENST00000555632 PLIN1O60240 522 aa24.25■■□□□ 1.47
GABRB3-209ENST00000555632 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
GABRB3-209ENST00000555632 TRMT2AQ8IZ69 625 aaKnown RBP24.25■■□□□ 1.47
GABRB3-209ENST00000555632 POLKQ9UBT6 870 aa24.25■■□□□ 1.47
GABRB3-209ENST00000555632 AKAP12Q02952 1782 aa24.24■■□□□ 1.47
GABRB3-209ENST00000555632 NKTRP30414 1462 aaKnown RBP24.24■■□□□ 1.47
GABRB3-209ENST00000555632 U2SURPO15042 1029 aaKnown RBP24.24■■□□□ 1.47
GABRB3-209ENST00000555632 ACEP12821 1306 aa24.23■■□□□ 1.47
GABRB3-209ENST00000555632 XRN1Q8IZH2 1706 aaKnown RBP24.23■■□□□ 1.47
GABRB3-209ENST00000555632 PPM1GO15355 546 aaPredicted RBP24.23■■□□□ 1.47
GABRB3-209ENST00000555632 ZNF142P52746 1687 aaPredicted RBP24.22■■□□□ 1.47
GABRB3-209ENST00000555632 TOPAZ1Q8N9V7 1692 aa24.22■■□□□ 1.47
GABRB3-209ENST00000555632 PNPLA6Q8IY17 1366 aa24.22■■□□□ 1.47
GABRB3-209ENST00000555632 ITSN1Q15811 1721 aa24.22■■□□□ 1.47
GABRB3-209ENST00000555632 ANKLE2Q86XL3 938 aa24.22■■□□□ 1.47
GABRB3-209ENST00000555632 TSHZ2Q9NRE2 1034 aa24.22■■□□□ 1.47
GABRB3-209ENST00000555632 MAP2P11137 1827 aaKnown RBP24.21■■□□□ 1.47
GABRB3-209ENST00000555632 SETD1BQ9UPS6 1966 aaKnown RBP24.21■■□□□ 1.47
GABRB3-209ENST00000555632 ZNF692Q9BU19 519 aaPredicted RBP24.2■■□□□ 1.47
GABRB3-209ENST00000555632 EMILIN1Q9Y6C2 1016 aa24.2■■□□□ 1.47
GABRB3-209ENST00000555632 PLEKHG3A1L390 1219 aa24.19■■□□□ 1.46
GABRB3-209ENST00000555632 DIAPH1O60610 1272 aaKnown RBP24.19■■□□□ 1.46
GABRB3-209ENST00000555632 NGEFQ8N5V2 710 aa24.19■■□□□ 1.46
GABRB3-209ENST00000555632 PMFBP1Q8TBY8 1022 aa24.19■■□□□ 1.46
GABRB3-209ENST00000555632 EXOC6Q8TAG9 804 aa24.18■■□□□ 1.46
GABRB3-209ENST00000555632 PLEKHF1Q96S99 279 aa24.18■■□□□ 1.46
GABRB3-209ENST00000555632 PHF23Q9BUL5 403 aaPredicted RBP24.18■■□□□ 1.46
GABRB3-209ENST00000555632 E9PSI1 815 aa24.17■■□□□ 1.46
GABRB3-209ENST00000555632 RGPD8O14715 1765 aaPredicted RBP24.17■■□□□ 1.46
GABRB3-209ENST00000555632 RBM33Q96EV2 1170 aaKnown RBP24.17■■□□□ 1.46
GABRB3-209ENST00000555632 COG3Q96JB2 828 aa24.17■■□□□ 1.46
GABRB3-209ENST00000555632 TTC21BQ7Z4L5 1316 aa24.16■■□□□ 1.46
GABRB3-209ENST00000555632 RRS1Q15050 365 aaKnown RBP24.16■■□□□ 1.46
GABRB3-209ENST00000555632 NRKQ7Z2Y5 1582 aa24.15■■□□□ 1.46
GABRB3-209ENST00000555632 PIK3R4Q99570 1358 aa24.15■■□□□ 1.46
GABRB3-209ENST00000555632 USP6P35125 1406 aa24.14■■□□□ 1.46
GABRB3-209ENST00000555632 C20orf194Q5TEA3 1177 aa24.13■■□□□ 1.45
GABRB3-209ENST00000555632 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
GABRB3-209ENST00000555632 CCDC136Q96JN2 1154 aa24.11■■□□□ 1.45
GABRB3-209ENST00000555632 AATKQ6ZMQ8 1374 aa24.11■■□□□ 1.45
GABRB3-209ENST00000555632 CCDC27Q2M243 656 aa24.1■■□□□ 1.45
GABRB3-209ENST00000555632 SSH2Q76I76 1423 aa24.09■■□□□ 1.45
GABRB3-209ENST00000555632 TMPOP42166 694 aaKnown RBP24.08■■□□□ 1.45
GABRB3-209ENST00000555632 OVOS2A0A0J9YW53 1432 aa24.07■■□□□ 1.44
GABRB3-209ENST00000555632 BCAR3O75815 825 aa24.07■■□□□ 1.44
GABRB3-209ENST00000555632 OVOS2Q6IE36 1432 aa24.07■■□□□ 1.44
GABRB3-209ENST00000555632 WDR63Q8IWG1 891 aa24.07■■□□□ 1.44
GABRB3-209ENST00000555632 IL13P35225 146 aa24.07■■□□□ 1.44
GABRB3-209ENST00000555632 NGDNQ8NEJ9 315 aaKnown RBP24.07■■□□□ 1.44
GABRB3-209ENST00000555632 HMOX1P09601 288 aa24.06■■□□□ 1.44
GABRB3-209ENST00000555632 CRBNQ96SW2 442 aa24.06■■□□□ 1.44
GABRB3-209ENST00000555632 TRIM35Q9UPQ4 493 aa24.06■■□□□ 1.44
GABRB3-209ENST00000555632 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
GABRB3-209ENST00000555632 LRRC7Q96NW7 1537 aa24.06■■□□□ 1.44
GABRB3-209ENST00000555632 RSPH6AQ9H0K4 717 aa24.05■■□□□ 1.44
GABRB3-209ENST00000555632 MAPK8IP3Q9UPT6 1336 aa24.05■■□□□ 1.44
GABRB3-209ENST00000555632 NPHP4O75161 1426 aaPredicted RBP24.05■■□□□ 1.44
GABRB3-209ENST00000555632 NALCNQ8IZF0 1738 aa24.05■■□□□ 1.44
GABRB3-209ENST00000555632 PRKAR2BP31323 418 aa24.04■■□□□ 1.44
GABRB3-209ENST00000555632 SOX12O15370 315 aa24.04■■□□□ 1.44
GABRB3-209ENST00000555632 FCHSD2O94868 740 aa24.04■■□□□ 1.44
GABRB3-209ENST00000555632 FMN2Q9NZ56 1722 aa24.03■■□□□ 1.44
GABRB3-209ENST00000555632 NCBP3Q53F19 620 aaKnown RBP24.02■■□□□ 1.44
GABRB3-209ENST00000555632 PHACTR3Q96KR7 559 aa24.02■■□□□ 1.44
GABRB3-209ENST00000555632 RIPK4P57078 832 aa24.01■■□□□ 1.43
GABRB3-209ENST00000555632 ANKARQ7Z5J8 1434 aa24.01■■□□□ 1.43
GABRB3-209ENST00000555632 TSR2Q969E8 191 aaKnown RBP23.98■■□□□ 1.43
GABRB3-209ENST00000555632 USP31Q70CQ4 1352 aa23.98■■□□□ 1.43
GABRB3-209ENST00000555632 TTC21AQ8NDW8 1320 aa23.98■■□□□ 1.43
GABRB3-209ENST00000555632 PEAK1Q9H792 1746 aa23.97■■□□□ 1.43
GABRB3-209ENST00000555632 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
GABRB3-209ENST00000555632 HSP90AB2PQ58FF8 381 aa23.96■■□□□ 1.43
GABRB3-209ENST00000555632 PIK3C2AO00443 1686 aa23.95■■□□□ 1.43
GABRB3-209ENST00000555632 EIF4A2Q14240 407 aaKnown RBP23.95■■□□□ 1.42
GABRB3-209ENST00000555632 NUTM2GQ5VZR2 741 aa23.95■■□□□ 1.42
GABRB3-209ENST00000555632 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.94■■□□□ 1.42
GABRB3-209ENST00000555632 MYH16Q9H6N6 1097 aa23.94■■□□□ 1.42
GABRB3-209ENST00000555632 FANCIQ9NVI1 1328 aa23.94■■□□□ 1.42
GABRB3-209ENST00000555632 RARSP54136 660 aaKnown RBP23.93■■□□□ 1.42
GABRB3-209ENST00000555632 ADGRL3Q9HAR2 1447 aa23.93■■□□□ 1.42
GABRB3-209ENST00000555632 MAP3K19Q56UN5 1328 aa23.93■■□□□ 1.42
GABRB3-209ENST00000555632 AEBP1Q8IUX7 1158 aa23.92■■□□□ 1.42
GABRB3-209ENST00000555632 BCL2L13Q9BXK5 485 aa23.92■■□□□ 1.42
GABRB3-209ENST00000555632 PHF8Q9UPP1 1060 aa23.92■■□□□ 1.42
GABRB3-209ENST00000555632 NLRP6P59044 892 aa23.91■■□□□ 1.42
GABRB3-209ENST00000555632 PAK3O75914 559 aaPredicted RBP23.9■■□□□ 1.42
GABRB3-209ENST00000555632 NFE2L2Q16236 605 aa23.9■■□□□ 1.42
GABRB3-209ENST00000555632 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
GABRB3-209ENST00000555632 THUMPD2Q9BTF0 503 aaKnown RBP23.9■■□□□ 1.42
GABRB3-209ENST00000555632 NEFMP07197 916 aa23.89■■□□□ 1.41
GABRB3-209ENST00000555632 ESCO1Q5FWF5 840 aa23.89■■□□□ 1.41
GABRB3-209ENST00000555632 RBM19Q9Y4C8 960 aaKnown RBP23.89■■□□□ 1.41
GABRB3-209ENST00000555632 EXOSC9Q06265 439 aaKnown RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms