RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 NAIPQ13075 1403 aa14.01□□□□□ -0.17
PRKCH-218ENST00000555628 DEFB132Q7Z7B7 95 aa14.01□□□□□ -0.17
PRKCH-218ENST00000555628 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
PRKCH-218ENST00000555628 SPATA31A3Q5VYP0 1347 aa13.99□□□□□ -0.17
PRKCH-218ENST00000555628 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
PRKCH-218ENST00000555628 XPCQ01831 940 aaPredicted RBP13.99□□□□□ -0.17
PRKCH-218ENST00000555628 NRAPQ86VF7 1730 aa13.98□□□□□ -0.17
PRKCH-218ENST00000555628 IFT172Q9UG01 1749 aa13.98□□□□□ -0.17
PRKCH-218ENST00000555628 VGFO15240 615 aaPredicted RBP13.98□□□□□ -0.17
PRKCH-218ENST00000555628 FOXO3O43524 673 aa13.98□□□□□ -0.17
PRKCH-218ENST00000555628 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
PRKCH-218ENST00000555628 ESCO1Q5FWF5 840 aa13.97□□□□□ -0.17
PRKCH-218ENST00000555628 CCDC144AA2RUR9 1427 aa13.97□□□□□ -0.17
PRKCH-218ENST00000555628 RPGRIP1LQ68CZ1 1315 aa13.96□□□□□ -0.17
PRKCH-218ENST00000555628 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.18
PRKCH-218ENST00000555628 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.18
PRKCH-218ENST00000555628 VPS72Q15906 364 aa13.95□□□□□ -0.18
PRKCH-218ENST00000555628 HRCP23327 699 aa13.94□□□□□ -0.18
PRKCH-218ENST00000555628 TNS3Q68CZ2 1445 aa13.94□□□□□ -0.18
PRKCH-218ENST00000555628 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
PRKCH-218ENST00000555628 TNS1Q9HBL0 1735 aaKnown RBP13.94□□□□□ -0.18
PRKCH-218ENST00000555628 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
PRKCH-218ENST00000555628 RGPD8O14715 1765 aaPredicted RBP13.94□□□□□ -0.18
PRKCH-218ENST00000555628 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
PRKCH-218ENST00000555628 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
PRKCH-218ENST00000555628 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
PRKCH-218ENST00000555628 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
PRKCH-218ENST00000555628 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
PRKCH-218ENST00000555628 RGPD1P0DJD0 1748 aa13.92□□□□□ -0.18
PRKCH-218ENST00000555628 PIK3C2GO75747 1445 aa13.91□□□□□ -0.18
PRKCH-218ENST00000555628 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
PRKCH-218ENST00000555628 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
PRKCH-218ENST00000555628 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
PRKCH-218ENST00000555628 NRXN1Q9ULB1 1477 aa13.91□□□□□ -0.18
PRKCH-218ENST00000555628 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
PRKCH-218ENST00000555628 CRYBG1Q9Y4K1 1723 aa13.9□□□□□ -0.18
PRKCH-218ENST00000555628 ITGAEP38570 1179 aa13.9□□□□□ -0.18
PRKCH-218ENST00000555628 KRT27Q7Z3Y8 459 aa13.9□□□□□ -0.18
PRKCH-218ENST00000555628 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
PRKCH-218ENST00000555628 PSDA5PKW4 1024 aaPredicted RBP13.89□□□□□ -0.19
PRKCH-218ENST00000555628 SPOCK2Q92563 424 aa13.89□□□□□ -0.19
PRKCH-218ENST00000555628 ALS2Q96Q42 1657 aa13.88□□□□□ -0.19
PRKCH-218ENST00000555628 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
PRKCH-218ENST00000555628 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
PRKCH-218ENST00000555628 KIF12Q96FN5 646 aa13.88□□□□□ -0.19
PRKCH-218ENST00000555628 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
PRKCH-218ENST00000555628 CABLES1Q8TDN4 633 aa13.87□□□□□ -0.19
PRKCH-218ENST00000555628 YTHDC2Q9H6S0 1430 aaKnown RBP13.87□□□□□ -0.19
PRKCH-218ENST00000555628 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
PRKCH-218ENST00000555628 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
PRKCH-218ENST00000555628 COL14A1Q05707 1796 aaKnown RBP13.86□□□□□ -0.19
PRKCH-218ENST00000555628 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
PRKCH-218ENST00000555628 RREB1Q92766 1687 aa13.85□□□□□ -0.19
PRKCH-218ENST00000555628 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 ANKRD30BQ9BXX2 1392 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 MAP3K13O43283 966 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 BAG6P46379 1132 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 CLCN6P51797 869 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
PRKCH-218ENST00000555628 STK26Q9P289 416 aa13.83□□□□□ -0.2
PRKCH-218ENST00000555628 UTRNP46939 3433 aa13.83□□□□□ -0.2
PRKCH-218ENST00000555628 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
PRKCH-218ENST00000555628 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
PRKCH-218ENST00000555628 ANKARQ7Z5J8 1434 aa13.81□□□□□ -0.2
PRKCH-218ENST00000555628 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
PRKCH-218ENST00000555628 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
PRKCH-218ENST00000555628 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
PRKCH-218ENST00000555628 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
PRKCH-218ENST00000555628 R3HDM1Q15032 1099 aaKnown RBP13.8□□□□□ -0.2
PRKCH-218ENST00000555628 SPATA31A5Q5VU36 1347 aa13.8□□□□□ -0.2
PRKCH-218ENST00000555628 SPATA31A7Q8IWB4 1347 aa13.8□□□□□ -0.2
PRKCH-218ENST00000555628 PYGBP11216 843 aa13.79□□□□□ -0.2
PRKCH-218ENST00000555628 PSME1Q06323 249 aa13.78□□□□□ -0.2
PRKCH-218ENST00000555628 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
PRKCH-218ENST00000555628 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
PRKCH-218ENST00000555628 ADGRB1O14514 1584 aa13.78□□□□□ -0.2
PRKCH-218ENST00000555628 BTG4Q9NY30 223 aa13.77□□□□□ -0.21
PRKCH-218ENST00000555628 CCDC9Q9Y3X0 531 aaKnown RBP13.77□□□□□ -0.21
PRKCH-218ENST00000555628 PARD3Q8TEW0 1356 aa13.76□□□□□ -0.21
PRKCH-218ENST00000555628 GSE1Q14687 1217 aa13.76□□□□□ -0.21
PRKCH-218ENST00000555628 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
PRKCH-218ENST00000555628 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
PRKCH-218ENST00000555628 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
PRKCH-218ENST00000555628 TRPC6Q9Y210 931 aa13.76□□□□□ -0.21
PRKCH-218ENST00000555628 PHRF1Q9P1Y6 1649 aaKnown RBP13.75□□□□□ -0.21
PRKCH-218ENST00000555628 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
PRKCH-218ENST00000555628 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
PRKCH-218ENST00000555628 TULP4Q9NRJ4 1543 aa13.74□□□□□ -0.21
PRKCH-218ENST00000555628 RGL3Q3MIN7 710 aa13.73□□□□□ -0.21
PRKCH-218ENST00000555628 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
PRKCH-218ENST00000555628 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
PRKCH-218ENST00000555628 SPATA31A1Q5TZJ5 1347 aa13.72□□□□□ -0.21
PRKCH-218ENST00000555628 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
PRKCH-218ENST00000555628 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
PRKCH-218ENST00000555628 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
PRKCH-218ENST00000555628 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
PRKCH-218ENST00000555628 LMO7Q8WWI1 1683 aa13.71□□□□□ -0.21
PRKCH-218ENST00000555628 A0A0G2JS52 829 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms