RNA–Protein interactions for RNA: ENST00000555587.5

RPGRIP1-209, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene RPGRIP1, Length 2,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-209ENST00000555587 SSH2Q76I76 1423 aa11.11□□□□□ -0.63
RPGRIP1-209ENST00000555587 ADGRL3Q9HAR2 1447 aa11.11□□□□□ -0.63
RPGRIP1-209ENST00000555587 HSPA2P54652 639 aa11.11□□□□□ -0.63
RPGRIP1-209ENST00000555587 MAP2P11137 1827 aaKnown RBP11.11□□□□□ -0.63
RPGRIP1-209ENST00000555587 NCOA3Q9Y6Q9 1424 aa11.11□□□□□ -0.63
RPGRIP1-209ENST00000555587 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 ZNF521Q96K83 1311 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 SLC26A8Q96RN1 970 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 PRR36Q9H6K5 1346 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 OVOS2A0A0J9YW53 1432 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 OVOS2Q6IE36 1432 aa11.1□□□□□ -0.63
RPGRIP1-209ENST00000555587 RGPD8O14715 1765 aaPredicted RBP11.09□□□□□ -0.63
RPGRIP1-209ENST00000555587 USP31Q70CQ4 1352 aa11.08□□□□□ -0.64
RPGRIP1-209ENST00000555587 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
RPGRIP1-209ENST00000555587 MTHFSP49914 203 aa11.08□□□□□ -0.64
RPGRIP1-209ENST00000555587 DCCP43146 1447 aa11.07□□□□□ -0.64
RPGRIP1-209ENST00000555587 CCDC27Q2M243 656 aa11.06□□□□□ -0.64
RPGRIP1-209ENST00000555587 RUNDC1Q96C34 613 aa11.06□□□□□ -0.64
RPGRIP1-209ENST00000555587 PIK3C2AO00443 1686 aa11.06□□□□□ -0.64
RPGRIP1-209ENST00000555587 KIF24Q5T7B8 1368 aa11.06□□□□□ -0.64
RPGRIP1-209ENST00000555587 KCNA6P17658 529 aa11.06□□□□□ -0.64
RPGRIP1-209ENST00000555587 MARF1Q9Y4F3 1742 aaKnown RBP11.05□□□□□ -0.64
RPGRIP1-209ENST00000555587 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
RPGRIP1-209ENST00000555587 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
RPGRIP1-209ENST00000555587 GGNBP2Q9H3C7 697 aa11.05□□□□□ -0.64
RPGRIP1-209ENST00000555587 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 COG3Q96JB2 828 aa11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 PHF23Q9BUL5 403 aaPredicted RBP11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 SENP3Q9H4L4 574 aaPredicted RBP11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 STRCQ7RTU9 1775 aa11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 ACEP12821 1306 aa11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 FKBP8Q14318 412 aa11.04□□□□□ -0.64
RPGRIP1-209ENST00000555587 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
RPGRIP1-209ENST00000555587 TRMT2AQ8IZ69 625 aaKnown RBP11.03□□□□□ -0.64
RPGRIP1-209ENST00000555587 MST1RQ04912 1400 aa11.02□□□□□ -0.64
RPGRIP1-209ENST00000555587 E9PSI1 815 aa11.02□□□□□ -0.65
RPGRIP1-209ENST00000555587 DIAPH1O60610 1272 aaKnown RBP11.02□□□□□ -0.65
RPGRIP1-209ENST00000555587 WDR63Q8IWG1 891 aa11.02□□□□□ -0.65
RPGRIP1-209ENST00000555587 SLFN5Q08AF3 891 aa11.01□□□□□ -0.65
RPGRIP1-209ENST00000555587 POLKQ9UBT6 870 aa11.01□□□□□ -0.65
RPGRIP1-209ENST00000555587 RCAN3Q9UKA8 241 aa11□□□□□ -0.65
RPGRIP1-209ENST00000555587 PEAK1Q9H792 1746 aa11□□□□□ -0.65
RPGRIP1-209ENST00000555587 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
RPGRIP1-209ENST00000555587 APAF1O14727 1248 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 FCHSD2O94868 740 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 IL16Q14005 1332 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 RTL1A6NKG5 1358 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 STRCP1A6NGW2 1772 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 TNNT2P45379 298 aaPredicted RBP10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 DUSP27Q5VZP5 1158 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 NME9Q86XW9 330 aa10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
RPGRIP1-209ENST00000555587 PPP4R2Q9NY27 417 aa10.98□□□□□ -0.65
RPGRIP1-209ENST00000555587 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
RPGRIP1-209ENST00000555587 U2AF1L5P0DN76 240 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 RRP1P56182 461 aaKnown RBP10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 U2AF1Q01081 240 aaKnown RBP eCLIP10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 SBNO1A3KN83 1393 aa10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 SLIT3O75094 1523 aa10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 WWC1Q8IX03 1113 aa10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 TCP11L2Q8N4U5 519 aa10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 MAPK8IP3Q9UPT6 1336 aa10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 ABCC6O95255 1503 aa10.97□□□□□ -0.65
RPGRIP1-209ENST00000555587 CCDC146Q8IYE0 955 aa10.96□□□□□ -0.65
RPGRIP1-209ENST00000555587 NGDNQ8NEJ9 315 aaKnown RBP10.96□□□□□ -0.65
RPGRIP1-209ENST00000555587 ARHGEF10O15013 1369 aa10.96□□□□□ -0.65
RPGRIP1-209ENST00000555587 IL13P35225 146 aa10.96□□□□□ -0.66
RPGRIP1-209ENST00000555587 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.66
RPGRIP1-209ENST00000555587 FLT4P35916 1363 aa10.96□□□□□ -0.66
RPGRIP1-209ENST00000555587 ALS2Q96Q42 1657 aa10.96□□□□□ -0.66
RPGRIP1-209ENST00000555587 LTN1O94822 1766 aa10.95□□□□□ -0.66
RPGRIP1-209ENST00000555587 NFAT5O94916 1531 aa10.95□□□□□ -0.66
RPGRIP1-209ENST00000555587 NEFMP07197 916 aa10.95□□□□□ -0.66
RPGRIP1-209ENST00000555587 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.95□□□□□ -0.66
RPGRIP1-209ENST00000555587 XIRP1Q702N8 1843 aaKnown RBP10.95□□□□□ -0.66
RPGRIP1-209ENST00000555587 DLG5Q8TDM6 1919 aa10.94□□□□□ -0.66
RPGRIP1-209ENST00000555587 CDCA7LQ96GN5 454 aa10.94□□□□□ -0.66
RPGRIP1-209ENST00000555587 RSPH6AQ9H0K4 717 aa10.94□□□□□ -0.66
RPGRIP1-209ENST00000555587 C1orf167Q5SNV9 1468 aa10.94□□□□□ -0.66
RPGRIP1-209ENST00000555587 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
RPGRIP1-209ENST00000555587 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
RPGRIP1-209ENST00000555587 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
RPGRIP1-209ENST00000555587 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
RPGRIP1-209ENST00000555587 MED1Q15648 1581 aaPredicted RBP10.93□□□□□ -0.66
RPGRIP1-209ENST00000555587 TMPOP42166 694 aaKnown RBP10.92□□□□□ -0.66
RPGRIP1-209ENST00000555587 C19orf44Q9H6X5 657 aa10.92□□□□□ -0.66
RPGRIP1-209ENST00000555587 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
RPGRIP1-209ENST00000555587 U2SURPO15042 1029 aaKnown RBP10.92□□□□□ -0.66
RPGRIP1-209ENST00000555587 EMILIN1Q9Y6C2 1016 aa10.92□□□□□ -0.66
RPGRIP1-209ENST00000555587 KDRP35968 1356 aa10.91□□□□□ -0.66
RPGRIP1-209ENST00000555587 FAM208AQ9UK61 1670 aaKnown RBP10.91□□□□□ -0.66
RPGRIP1-209ENST00000555587 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
RPGRIP1-209ENST00000555587 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
RPGRIP1-209ENST00000555587 PLEKHG2Q9H7P9 1386 aa10.91□□□□□ -0.66
RPGRIP1-209ENST00000555587 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
RPGRIP1-209ENST00000555587 LRRC37A3O60309 1634 aa10.9□□□□□ -0.66
RPGRIP1-209ENST00000555587 NFE2L2Q16236 605 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms