RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 SPDYE5A6NIY4 337 aa10.21□□□□□ -0.77
SCFD1-216ENST00000555550 AMHR2Q16671 573 aa10.21□□□□□ -0.77
SCFD1-216ENST00000555550 DESI1Q6ICB0 168 aa10.21□□□□□ -0.77
SCFD1-216ENST00000555550 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.77
SCFD1-216ENST00000555550 ZC3H15Q8WU90 426 aaKnown RBP10.2□□□□□ -0.78
SCFD1-216ENST00000555550 LYPD8Q6UX82 237 aa10.19□□□□□ -0.78
SCFD1-216ENST00000555550 IRF7Q92985 503 aa10.19□□□□□ -0.78
SCFD1-216ENST00000555550 PURBQ96QR8 312 aaKnown RBP10.19□□□□□ -0.78
SCFD1-216ENST00000555550 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
SCFD1-216ENST00000555550 SOBPA7XYQ1 873 aa10.18□□□□□ -0.78
SCFD1-216ENST00000555550 CFAP99D6REC4 459 aa10.18□□□□□ -0.78
SCFD1-216ENST00000555550 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
SCFD1-216ENST00000555550 MRPL14Q6P1L8 145 aaKnown RBP10.18□□□□□ -0.78
SCFD1-216ENST00000555550 RSBN1LQ6PCB5 846 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-216ENST00000555550 FOXJ1Q92949 421 aa10.18□□□□□ -0.78
SCFD1-216ENST00000555550 H3BM21 787 aa10.17□□□□□ -0.78
SCFD1-216ENST00000555550 TIMP2P16035 220 aa10.17□□□□□ -0.78
SCFD1-216ENST00000555550 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-216ENST00000555550 ARID5BQ14865 1188 aa10.17□□□□□ -0.78
SCFD1-216ENST00000555550 NPAS3Q8IXF0 933 aa10.17□□□□□ -0.78
SCFD1-216ENST00000555550 MPNDQ8N594 471 aa10.17□□□□□ -0.78
SCFD1-216ENST00000555550 MAP10Q9P2G4 905 aa10.17□□□□□ -0.78
SCFD1-216ENST00000555550 HRCP23327 699 aa10.16□□□□□ -0.78
SCFD1-216ENST00000555550 SCARF1Q14162 830 aa10.15□□□□□ -0.78
SCFD1-216ENST00000555550 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
SCFD1-216ENST00000555550 ZSCAN1Q8NBB4 408 aa10.15□□□□□ -0.78
SCFD1-216ENST00000555550 FAM174AQ8TBP5 190 aa10.15□□□□□ -0.78
SCFD1-216ENST00000555550 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
SCFD1-216ENST00000555550 ADH1CP00326 375 aa10.14□□□□□ -0.79
SCFD1-216ENST00000555550 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
SCFD1-216ENST00000555550 CABLES1Q8TDN4 633 aa10.14□□□□□ -0.79
SCFD1-216ENST00000555550 SPTLC1O15269 473 aa10.13□□□□□ -0.79
SCFD1-216ENST00000555550 GJA5P36382 358 aa10.13□□□□□ -0.79
SCFD1-216ENST00000555550 RIC3Q7Z5B4 369 aa10.13□□□□□ -0.79
SCFD1-216ENST00000555550 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
SCFD1-216ENST00000555550 FAM181BA6NEQ2 426 aa10.12□□□□□ -0.79
SCFD1-216ENST00000555550 TRIM66O15016 1216 aa10.12□□□□□ -0.79
SCFD1-216ENST00000555550 PER1O15534 1290 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-216ENST00000555550 AGERQ15109 404 aa10.12□□□□□ -0.79
SCFD1-216ENST00000555550 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
SCFD1-216ENST00000555550 CDK15Q96Q40 435 aa10.12□□□□□ -0.79
SCFD1-216ENST00000555550 ZBTB3Q9H5J0 574 aa10.12□□□□□ -0.79
SCFD1-216ENST00000555550 ZIC2O95409 532 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-216ENST00000555550 F12P00748 615 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-216ENST00000555550 C4orf48Q5BLP8 95 aa10.11□□□□□ -0.79
SCFD1-216ENST00000555550 C6orf118Q5T5N4 469 aa10.11□□□□□ -0.79
SCFD1-216ENST00000555550 TSC1Q92574 1164 aa10.11□□□□□ -0.79
SCFD1-216ENST00000555550 ITPKCQ96DU7 683 aa10.11□□□□□ -0.79
SCFD1-216ENST00000555550 NR3C2P08235 984 aa10.1□□□□□ -0.79
SCFD1-216ENST00000555550 GRM5P41594 1212 aa10.09□□□□□ -0.79
SCFD1-216ENST00000555550 NUTM2BA6NNL0 878 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-216ENST00000555550 NUTM2EB1AL46 878 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-216ENST00000555550 MAN1A2O60476 641 aa10.06□□□□□ -0.8
SCFD1-216ENST00000555550 QPCTQ16769 361 aa10.06□□□□□ -0.8
SCFD1-216ENST00000555550 NUTM2DQ5VT03 806 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-216ENST00000555550 PRPF38BQ5VTL8 546 aaKnown RBP10.06□□□□□ -0.8
SCFD1-216ENST00000555550 NUTM2AQ8IVF1 878 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-216ENST00000555550 LIMD1Q9UGP4 676 aa10.06□□□□□ -0.8
SCFD1-216ENST00000555550 NR5A1Q13285 461 aa10.05□□□□□ -0.8
SCFD1-216ENST00000555550 BPHLQ86WA6 291 aaPredicted RBP10.05□□□□□ -0.8
SCFD1-216ENST00000555550 AK7Q96M32 723 aa10.05□□□□□ -0.8
SCFD1-216ENST00000555550 BMP2P12643 396 aa10.03□□□□□ -0.8
SCFD1-216ENST00000555550 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
SCFD1-216ENST00000555550 RTL5Q5HYW3 569 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-216ENST00000555550 LILRB3O75022 631 aa10□□□□□ -0.81
SCFD1-216ENST00000555550 PPFIA3O75145 1194 aa10□□□□□ -0.81
SCFD1-216ENST00000555550 UPP2O95045 317 aa10□□□□□ -0.81
SCFD1-216ENST00000555550 VSIG8P0DPA2 414 aa10□□□□□ -0.81
SCFD1-216ENST00000555550 MAGEB6P1A0A0J9YX57 407 aa9.99□□□□□ -0.81
SCFD1-216ENST00000555550 PDE4DQ08499 809 aa9.99□□□□□ -0.81
SCFD1-216ENST00000555550 LINC00528Q8N1L1 170 aa9.99□□□□□ -0.81
SCFD1-216ENST00000555550 MEIOBQ8N635 442 aa9.99□□□□□ -0.81
SCFD1-216ENST00000555550 FSHRP23945 695 aa9.98□□□□□ -0.81
SCFD1-216ENST00000555550 VASH1Q7L8A9 365 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-216ENST00000555550 SH3RF1Q7Z6J0 888 aa9.98□□□□□ -0.81
SCFD1-216ENST00000555550 DNMT3LQ9UJW3 386 aa9.98□□□□□ -0.81
SCFD1-216ENST00000555550 ARMC2Q8NEN0 867 aa9.97□□□□□ -0.81
SCFD1-216ENST00000555550 C1QTNF2Q9BXJ5 285 aa9.97□□□□□ -0.81
SCFD1-216ENST00000555550 SOS2Q07890 1332 aaPredicted RBP9.97□□□□□ -0.81
SCFD1-216ENST00000555550 CARD14Q9BXL6 1004 aa9.96□□□□□ -0.82
SCFD1-216ENST00000555550 SH3BP5LQ7L8J4 393 aa9.95□□□□□ -0.82
SCFD1-216ENST00000555550 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
SCFD1-216ENST00000555550 TUSC1Q2TAM9 212 aa9.94□□□□□ -0.82
SCFD1-216ENST00000555550 HELBQ8NG08 1087 aaPredicted RBP9.94□□□□□ -0.82
SCFD1-216ENST00000555550 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
SCFD1-216ENST00000555550 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
SCFD1-216ENST00000555550 TSEN34Q9BSV6 310 aaKnown RBP9.93□□□□□ -0.82
SCFD1-216ENST00000555550 MAP4K5Q9Y4K4 846 aa9.93□□□□□ -0.82
SCFD1-216ENST00000555550 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
SCFD1-216ENST00000555550 CTDSPL2Q05D32 466 aa9.92□□□□□ -0.82
SCFD1-216ENST00000555550 TRMT44Q8IYL2 757 aaKnown RBP9.92□□□□□ -0.82
SCFD1-216ENST00000555550 CCDC116Q8IYX3 515 aa9.92□□□□□ -0.82
SCFD1-216ENST00000555550 SLC24A3Q9HC58 644 aa9.92□□□□□ -0.82
SCFD1-216ENST00000555550 EMILIN1Q9Y6C2 1016 aa9.92□□□□□ -0.82
SCFD1-216ENST00000555550 CLK2P49760 499 aaKnown RBP9.91□□□□□ -0.82
SCFD1-216ENST00000555550 CBLBQ13191 982 aa9.91□□□□□ -0.82
SCFD1-216ENST00000555550 TTLL8A6PVC2 850 aa9.9□□□□□ -0.82
SCFD1-216ENST00000555550 ERFEQ4G0M1 354 aa9.9□□□□□ -0.82
SCFD1-216ENST00000555550 PPP1R26Q5T8A7 1209 aaPredicted RBP9.89□□□□□ -0.83
SCFD1-216ENST00000555550 KRT76Q01546 638 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms