RNA–Protein interactions for RNA: ENST00000555547.5

SRSF5-211, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 5

Gene SRSF5, Length 2,057 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-211ENST00000555547 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.4
SRSF5-211ENST00000555547 PREX2Q70Z35 1606 aa12.52□□□□□ -0.41
SRSF5-211ENST00000555547 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
SRSF5-211ENST00000555547 KCNA6P17658 529 aa12.51□□□□□ -0.41
SRSF5-211ENST00000555547 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
SRSF5-211ENST00000555547 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
SRSF5-211ENST00000555547 HNRNPMP52272 730 aaKnown RBP eCLIP12.5□□□□□ -0.415e-7■■■■□ 22.2
SRSF5-211ENST00000555547 ATP1B4Q9UN42 357 aaPredicted RBP12.5□□□□□ -0.41
SRSF5-211ENST00000555547 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
SRSF5-211ENST00000555547 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
SRSF5-211ENST00000555547 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
SRSF5-211ENST00000555547 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
SRSF5-211ENST00000555547 SCAF11Q99590 1463 aaKnown RBP12.49□□□□□ -0.41
SRSF5-211ENST00000555547 ZC3H13Q5T200 1668 aaKnown RBP12.49□□□□□ -0.41
SRSF5-211ENST00000555547 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
SRSF5-211ENST00000555547 RBM25P49756 843 aaKnown RBP12.49□□□□□ -0.41
SRSF5-211ENST00000555547 CEP120Q8N960 986 aa12.49□□□□□ -0.41
SRSF5-211ENST00000555547 RGS12O14924 1447 aa12.49□□□□□ -0.41
SRSF5-211ENST00000555547 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-211ENST00000555547 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-211ENST00000555547 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-211ENST00000555547 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-211ENST00000555547 ZNF830Q96NB3 372 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-211ENST00000555547 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
SRSF5-211ENST00000555547 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
SRSF5-211ENST00000555547 INO80Q9ULG1 1556 aaPredicted RBP12.48□□□□□ -0.41
SRSF5-211ENST00000555547 TXNDC2Q86VQ3 553 aa12.47□□□□□ -0.41
SRSF5-211ENST00000555547 PROSER2Q86WR7 435 aaPredicted RBP12.47□□□□□ -0.41
SRSF5-211ENST00000555547 EXOC8Q8IYI6 725 aa12.47□□□□□ -0.41
SRSF5-211ENST00000555547 IRX3P78415 501 aaPredicted RBP12.47□□□□□ -0.41
SRSF5-211ENST00000555547 XIRP1Q702N8 1843 aaKnown RBP12.47□□□□□ -0.41
SRSF5-211ENST00000555547 LTKP29376 864 aa12.46□□□□□ -0.41
SRSF5-211ENST00000555547 TRIM44Q96DX7 344 aaPredicted RBP12.46□□□□□ -0.41
SRSF5-211ENST00000555547 NGLY1Q96IV0 654 aa12.46□□□□□ -0.41
SRSF5-211ENST00000555547 AFF2P51816 1311 aa12.46□□□□□ -0.42
SRSF5-211ENST00000555547 RTEL1-TNFRSF6BF6WH68 1400 aa12.46□□□□□ -0.42
SRSF5-211ENST00000555547 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.42
SRSF5-211ENST00000555547 MSH6P52701 1360 aa12.46□□□□□ -0.42
SRSF5-211ENST00000555547 GOLGA2Q08379 1002 aa12.46□□□□□ -0.42
SRSF5-211ENST00000555547 QTRT2Q9H974 415 aaKnown RBP12.46□□□□□ -0.42
SRSF5-211ENST00000555547 ZNF777Q9ULD5 760 aaPredicted RBP12.46□□□□□ -0.42
SRSF5-211ENST00000555547 MAP3K1Q13233 1512 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 E2F4Q16254 413 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 NBPF20Q3BBV1 942 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 TMTC2Q8N394 836 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 ABCC3O15438 1527 aa12.45□□□□□ -0.42
SRSF5-211ENST00000555547 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
SRSF5-211ENST00000555547 SYCP2Q9BX26 1530 aa12.44□□□□□ -0.42
SRSF5-211ENST00000555547 KDM4AO75164 1064 aa12.44□□□□□ -0.42
SRSF5-211ENST00000555547 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
SRSF5-211ENST00000555547 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
SRSF5-211ENST00000555547 LARP6Q9BRS8 491 aaKnown RBP12.44□□□□□ -0.42
SRSF5-211ENST00000555547 SLIT1O75093 1534 aa12.43□□□□□ -0.42
SRSF5-211ENST00000555547 SEMA3EO15041 775 aa12.43□□□□□ -0.42
SRSF5-211ENST00000555547 KIF3BO15066 747 aa12.43□□□□□ -0.42
SRSF5-211ENST00000555547 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
SRSF5-211ENST00000555547 NBPF11Q86T75 865 aa12.42□□□□□ -0.42
SRSF5-211ENST00000555547 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
SRSF5-211ENST00000555547 PRDM15P57071 1507 aaPredicted RBP12.42□□□□□ -0.42
SRSF5-211ENST00000555547 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
SRSF5-211ENST00000555547 TTC36A6NLP5 189 aa12.41□□□□□ -0.42
SRSF5-211ENST00000555547 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
SRSF5-211ENST00000555547 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
SRSF5-211ENST00000555547 NCOA3Q9Y6Q9 1424 aa12.4□□□□□ -0.42
SRSF5-211ENST00000555547 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.42
SRSF5-211ENST00000555547 LRP5O75197 1615 aa12.4□□□□□ -0.42
SRSF5-211ENST00000555547 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
SRSF5-211ENST00000555547 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
SRSF5-211ENST00000555547 ARHGEF1Q92888 912 aaKnown RBP12.39□□□□□ -0.43
SRSF5-211ENST00000555547 NCOA2Q15596 1464 aa12.39□□□□□ -0.43
SRSF5-211ENST00000555547 RGS3P49796 1198 aa12.39□□□□□ -0.43
SRSF5-211ENST00000555547 FOXD4L5Q5VV16 416 aaPredicted RBP12.39□□□□□ -0.43
SRSF5-211ENST00000555547 FOXD4L4Q8WXT5 416 aaPredicted RBP12.39□□□□□ -0.43
SRSF5-211ENST00000555547 SHPRHQ149N8 1683 aa12.39□□□□□ -0.43
SRSF5-211ENST00000555547 MKRN3Q13064 507 aaKnown RBP12.38□□□□□ -0.43
SRSF5-211ENST00000555547 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
SRSF5-211ENST00000555547 CFDP1Q9UEE9 299 aaPredicted RBP12.38□□□□□ -0.43
SRSF5-211ENST00000555547 AHDC1Q5TGY3 1603 aaPredicted RBP12.38□□□□□ -0.43
SRSF5-211ENST00000555547 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
SRSF5-211ENST00000555547 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
SRSF5-211ENST00000555547 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
SRSF5-211ENST00000555547 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
SRSF5-211ENST00000555547 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
SRSF5-211ENST00000555547 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
SRSF5-211ENST00000555547 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
SRSF5-211ENST00000555547 TIAM1Q13009 1591 aa12.36□□□□□ -0.43
SRSF5-211ENST00000555547 CCDC18Q5T9S5 1454 aa12.35□□□□□ -0.43
SRSF5-211ENST00000555547 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
SRSF5-211ENST00000555547 HSP90AA1P07900 732 aaKnown RBP12.35□□□□□ -0.43
SRSF5-211ENST00000555547 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
SRSF5-211ENST00000555547 EEA1Q15075 1411 aa12.35□□□□□ -0.43
SRSF5-211ENST00000555547 TMEM2Q9UHN6 1383 aa12.35□□□□□ -0.43
SRSF5-211ENST00000555547 APPP05067 770 aa12.34□□□□□ -0.43
SRSF5-211ENST00000555547 YY1P25490 414 aa12.34□□□□□ -0.43
SRSF5-211ENST00000555547 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
SRSF5-211ENST00000555547 CDC42BPAQ5VT25 1732 aa12.34□□□□□ -0.43
SRSF5-211ENST00000555547 EVX2Q03828 476 aa12.34□□□□□ -0.43
SRSF5-211ENST00000555547 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms