RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 ACEP12821 1306 aa24.07■■□□□ 1.44
PSEN1-212ENST00000555254 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
PSEN1-212ENST00000555254 ADAMTS2O95450 1211 aa24.06■■□□□ 1.44
PSEN1-212ENST00000555254 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
PSEN1-212ENST00000555254 PPIP5K1Q6PFW1 1433 aa24.05■■□□□ 1.44
PSEN1-212ENST00000555254 LRP6O75581 1613 aa24.04■■□□□ 1.44
PSEN1-212ENST00000555254 SHPRHQ149N8 1683 aa24.04■■□□□ 1.44
PSEN1-212ENST00000555254 KNSTRNQ9Y448 316 aa24.03■■□□□ 1.44
PSEN1-212ENST00000555254 SBNO1A3KN83 1393 aa24.03■■□□□ 1.44
PSEN1-212ENST00000555254 ATAD2Q6PL18 1390 aa24.02■■□□□ 1.44
PSEN1-212ENST00000555254 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
PSEN1-212ENST00000555254 HAP1P54257 671 aaPredicted RBP24.01■■□□□ 1.43
PSEN1-212ENST00000555254 C8orf37Q96NL8 207 aa24.01■■□□□ 1.43
PSEN1-212ENST00000555254 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
PSEN1-212ENST00000555254 CABLES1Q8TDN4 633 aa24■■□□□ 1.43
PSEN1-212ENST00000555254 PRKRIP1Q9H875 184 aaPredicted RBP23.99■■□□□ 1.43
PSEN1-212ENST00000555254 NINLQ9Y2I6 1382 aa23.99■■□□□ 1.43
PSEN1-212ENST00000555254 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
PSEN1-212ENST00000555254 ARHGEF10O15013 1369 aa23.97■■□□□ 1.43
PSEN1-212ENST00000555254 CNGB1Q14028 1251 aaPredicted RBP23.97■■□□□ 1.43
PSEN1-212ENST00000555254 NGLY1Q96IV0 654 aa23.97■■□□□ 1.43
PSEN1-212ENST00000555254 ITSN1Q15811 1721 aa23.96■■□□□ 1.43
PSEN1-212ENST00000555254 PER1O15534 1290 aaPredicted RBP23.96■■□□□ 1.43
PSEN1-212ENST00000555254 NUTM2GQ5VZR2 741 aa23.96■■□□□ 1.43
PSEN1-212ENST00000555254 SLC12A5Q9H2X9 1139 aa23.96■■□□□ 1.43
PSEN1-212ENST00000555254 KTN1Q86UP2 1357 aaKnown RBP23.95■■□□□ 1.42
PSEN1-212ENST00000555254 RALBP1Q15311 655 aa23.95■■□□□ 1.42
PSEN1-212ENST00000555254 TERF2IPQ9NYB0 399 aa23.95■■□□□ 1.42
PSEN1-212ENST00000555254 ZNF772Q68DY9 489 aaPredicted RBP23.94■■□□□ 1.42
PSEN1-212ENST00000555254 TOPAZ1Q8N9V7 1692 aa23.93■■□□□ 1.42
PSEN1-212ENST00000555254 AFF2P51816 1311 aa23.93■■□□□ 1.42
PSEN1-212ENST00000555254 HDGFL2Q7Z4V5 671 aaPredicted RBP23.92■■□□□ 1.42
PSEN1-212ENST00000555254 ABTB2Q8N961 1025 aa23.92■■□□□ 1.42
PSEN1-212ENST00000555254 RXRBP28702 533 aa23.9■■□□□ 1.42
PSEN1-212ENST00000555254 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
PSEN1-212ENST00000555254 COL22A1Q8NFW1 1626 aaPredicted RBP23.9■■□□□ 1.42
PSEN1-212ENST00000555254 CDK12Q9NYV4 1490 aaPredicted RBP23.89■■□□□ 1.42
PSEN1-212ENST00000555254 CC2D1BQ5T0F9 858 aaKnown RBP23.88■■□□□ 1.41
PSEN1-212ENST00000555254 ANKRD36BQ8N2N9 1353 aa23.88■■□□□ 1.41
PSEN1-212ENST00000555254 TRPM3Q9HCF6 1732 aaPredicted RBP23.87■■□□□ 1.41
PSEN1-212ENST00000555254 USP6P35125 1406 aa23.86■■□□□ 1.41
PSEN1-212ENST00000555254 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
PSEN1-212ENST00000555254 USP21Q9UK80 565 aa23.86■■□□□ 1.41
PSEN1-212ENST00000555254 MYOM1P52179 1685 aa23.86■■□□□ 1.41
PSEN1-212ENST00000555254 NPC1L1Q9UHC9 1359 aa23.85■■□□□ 1.41
PSEN1-212ENST00000555254 NLRP6P59044 892 aa23.84■■□□□ 1.41
PSEN1-212ENST00000555254 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
PSEN1-212ENST00000555254 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
PSEN1-212ENST00000555254 NLRP13Q86W25 1043 aa23.83■■□□□ 1.41
PSEN1-212ENST00000555254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.83■■□□□ 1.41
PSEN1-212ENST00000555254 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.41
PSEN1-212ENST00000555254 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
PSEN1-212ENST00000555254 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.4
PSEN1-212ENST00000555254 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
PSEN1-212ENST00000555254 FNBP4Q8N3X1 1017 aaPredicted RBP23.82■■□□□ 1.4
PSEN1-212ENST00000555254 CPSF1Q10570 1443 aaKnown RBP23.82■■□□□ 1.4
PSEN1-212ENST00000555254 NSD3Q9BZ95 1437 aa23.82■■□□□ 1.4
PSEN1-212ENST00000555254 ALS2Q96Q42 1657 aa23.81■■□□□ 1.4
PSEN1-212ENST00000555254 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
PSEN1-212ENST00000555254 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
PSEN1-212ENST00000555254 MRS2Q9HD23 443 aa23.8■■□□□ 1.4
PSEN1-212ENST00000555254 PARD3Q8TEW0 1356 aa23.79■■□□□ 1.4
PSEN1-212ENST00000555254 SSH2Q76I76 1423 aa23.78■■□□□ 1.4
PSEN1-212ENST00000555254 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
PSEN1-212ENST00000555254 RGS12O14924 1447 aa23.77■■□□□ 1.4
PSEN1-212ENST00000555254 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
PSEN1-212ENST00000555254 A0A1W2PP64 1363 aa23.77■■□□□ 1.4
PSEN1-212ENST00000555254 CD163L1Q9NR16 1453 aa23.76■■□□□ 1.39
PSEN1-212ENST00000555254 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
PSEN1-212ENST00000555254 MORC1Q86VD1 984 aa23.76■■□□□ 1.39
PSEN1-212ENST00000555254 SOX12O15370 315 aa23.75■■□□□ 1.39
PSEN1-212ENST00000555254 GCP02774 474 aa23.75■■□□□ 1.39
PSEN1-212ENST00000555254 CHRNA2Q15822 529 aa23.75■■□□□ 1.39
PSEN1-212ENST00000555254 NME9Q86XW9 330 aa23.75■■□□□ 1.39
PSEN1-212ENST00000555254 YTHDC1Q96MU7 727 aaKnown RBP23.75■■□□□ 1.39
PSEN1-212ENST00000555254 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
PSEN1-212ENST00000555254 TRPC5Q9UL62 973 aaPredicted RBP23.75■■□□□ 1.39
PSEN1-212ENST00000555254 NSD2O96028 1365 aa23.75■■□□□ 1.39
PSEN1-212ENST00000555254 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
PSEN1-212ENST00000555254 USP19O94966 1318 aa23.74■■□□□ 1.39
PSEN1-212ENST00000555254 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
PSEN1-212ENST00000555254 BTG4Q9NY30 223 aa23.73■■□□□ 1.39
PSEN1-212ENST00000555254 BCL9LQ86UU0 1499 aa23.73■■□□□ 1.39
PSEN1-212ENST00000555254 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
PSEN1-212ENST00000555254 RBM6P78332 1123 aaKnown RBP23.71■■□□□ 1.39
PSEN1-212ENST00000555254 EDC4Q6P2E9 1401 aaKnown RBP23.7■■□□□ 1.38
PSEN1-212ENST00000555254 PPP2R1AP30153 589 aa23.69■■□□□ 1.38
PSEN1-212ENST00000555254 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
PSEN1-212ENST00000555254 ABCA3Q99758 1704 aa23.69■■□□□ 1.38
PSEN1-212ENST00000555254 SLIT2O94813 1529 aa23.69■■□□□ 1.38
PSEN1-212ENST00000555254 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
PSEN1-212ENST00000555254 CCDC184Q52MB2 194 aa23.67■■□□□ 1.38
PSEN1-212ENST00000555254 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
PSEN1-212ENST00000555254 ATRNO75882 1429 aa23.67■■□□□ 1.38
PSEN1-212ENST00000555254 GJD4Q96KN9 370 aaPredicted RBP23.66■■□□□ 1.38
PSEN1-212ENST00000555254 STRN4Q9NRL3 753 aa23.66■■□□□ 1.38
PSEN1-212ENST00000555254 PIK3C2AO00443 1686 aa23.66■■□□□ 1.38
PSEN1-212ENST00000555254 FYB1O15117 783 aa23.65■■□□□ 1.38
PSEN1-212ENST00000555254 EVA1CP58658 441 aa23.65■■□□□ 1.38
PSEN1-212ENST00000555254 PHRF1Q9P1Y6 1649 aaKnown RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms