RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
ACTN1-214ENST00000555075 PXDNQ92626 1479 aa16.7■□□□□ 0.26
ACTN1-214ENST00000555075 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
ACTN1-214ENST00000555075 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
ACTN1-214ENST00000555075 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-214ENST00000555075 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
ACTN1-214ENST00000555075 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-214ENST00000555075 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
ACTN1-214ENST00000555075 SLC12A5Q9H2X9 1139 aa16.69■□□□□ 0.26
ACTN1-214ENST00000555075 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
ACTN1-214ENST00000555075 TOPAZ1Q8N9V7 1692 aa16.67■□□□□ 0.26
ACTN1-214ENST00000555075 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
ACTN1-214ENST00000555075 AFF2P51816 1311 aa16.67■□□□□ 0.26
ACTN1-214ENST00000555075 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
ACTN1-214ENST00000555075 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
ACTN1-214ENST00000555075 C8orf37Q96NL8 207 aa16.66■□□□□ 0.26
ACTN1-214ENST00000555075 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
ACTN1-214ENST00000555075 USP6P35125 1406 aa16.64■□□□□ 0.25
ACTN1-214ENST00000555075 NLRP6P59044 892 aa16.64■□□□□ 0.25
ACTN1-214ENST00000555075 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
ACTN1-214ENST00000555075 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
ACTN1-214ENST00000555075 CABLES1Q8TDN4 633 aa16.62■□□□□ 0.25
ACTN1-214ENST00000555075 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
ACTN1-214ENST00000555075 TTC21BQ7Z4L5 1316 aa16.62■□□□□ 0.25
ACTN1-214ENST00000555075 ZBTB7CA1YPR0 619 aa16.61■□□□□ 0.25
ACTN1-214ENST00000555075 RXRBP28702 533 aa16.61■□□□□ 0.25
ACTN1-214ENST00000555075 ANKRD36BQ8N2N9 1353 aa16.61■□□□□ 0.25
ACTN1-214ENST00000555075 A0A1W2PP64 1363 aa16.6■□□□□ 0.25
ACTN1-214ENST00000555075 CPSF1Q10570 1443 aaKnown RBP16.59■□□□□ 0.25
ACTN1-214ENST00000555075 EDC4Q6P2E9 1401 aaKnown RBP16.59■□□□□ 0.25
ACTN1-214ENST00000555075 SOX12O15370 315 aa16.58■□□□□ 0.24
ACTN1-214ENST00000555075 CDK12Q9NYV4 1490 aaPredicted RBP16.57■□□□□ 0.24
ACTN1-214ENST00000555075 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-214ENST00000555075 KIF7Q2M1P5 1343 aa16.56■□□□□ 0.24
ACTN1-214ENST00000555075 NME9Q86XW9 330 aa16.56■□□□□ 0.24
ACTN1-214ENST00000555075 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
ACTN1-214ENST00000555075 COG3Q96JB2 828 aa16.56■□□□□ 0.24
ACTN1-214ENST00000555075 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
ACTN1-214ENST00000555075 PRDM11Q9NQV5 511 aa16.56■□□□□ 0.24
ACTN1-214ENST00000555075 ZC3H6P61129 1189 aaKnown RBP16.55■□□□□ 0.24
ACTN1-214ENST00000555075 RGS12O14924 1447 aa16.54■□□□□ 0.24
ACTN1-214ENST00000555075 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
ACTN1-214ENST00000555075 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-214ENST00000555075 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
ACTN1-214ENST00000555075 PANK3Q9H999 370 aa16.54■□□□□ 0.24
ACTN1-214ENST00000555075 USP21Q9UK80 565 aa16.54■□□□□ 0.24
ACTN1-214ENST00000555075 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
ACTN1-214ENST00000555075 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
ACTN1-214ENST00000555075 CGNL1Q0VF96 1302 aa16.53■□□□□ 0.24
ACTN1-214ENST00000555075 GCP02774 474 aa16.53■□□□□ 0.24
ACTN1-214ENST00000555075 CCDC9Q9Y3X0 531 aaKnown RBP16.53■□□□□ 0.24
ACTN1-214ENST00000555075 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
ACTN1-214ENST00000555075 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
ACTN1-214ENST00000555075 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
ACTN1-214ENST00000555075 CCDC7Q96M83 1385 aa16.52■□□□□ 0.24
ACTN1-214ENST00000555075 MON2Q7Z3U7 1717 aa16.51■□□□□ 0.23
ACTN1-214ENST00000555075 SSH2Q76I76 1423 aa16.51■□□□□ 0.23
ACTN1-214ENST00000555075 EVA1CP58658 441 aa16.5■□□□□ 0.23
ACTN1-214ENST00000555075 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
ACTN1-214ENST00000555075 UPF1Q92900 1129 aaKnown RBP eCLIP16.5■□□□□ 0.236e-12■■□□□ 13.4
ACTN1-214ENST00000555075 GGNBP2Q9H3C7 697 aa16.5■□□□□ 0.23
ACTN1-214ENST00000555075 USP19O94966 1318 aa16.49■□□□□ 0.23
ACTN1-214ENST00000555075 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
ACTN1-214ENST00000555075 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
ACTN1-214ENST00000555075 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
ACTN1-214ENST00000555075 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
ACTN1-214ENST00000555075 KIAA0232Q92628 1395 aa16.49■□□□□ 0.23
ACTN1-214ENST00000555075 ATRNO75882 1429 aa16.48■□□□□ 0.23
ACTN1-214ENST00000555075 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
ACTN1-214ENST00000555075 MYOM1P52179 1685 aa16.47■□□□□ 0.23
ACTN1-214ENST00000555075 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
ACTN1-214ENST00000555075 CNGB1Q14028 1251 aaPredicted RBP16.47■□□□□ 0.23
ACTN1-214ENST00000555075 BTG4Q9NY30 223 aa16.47■□□□□ 0.23
ACTN1-214ENST00000555075 USP31Q70CQ4 1352 aa16.47■□□□□ 0.23
ACTN1-214ENST00000555075 BCL9LQ86UU0 1499 aa16.47■□□□□ 0.23
ACTN1-214ENST00000555075 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
ACTN1-214ENST00000555075 PIK3C2AO00443 1686 aa16.46■□□□□ 0.23
ACTN1-214ENST00000555075 FYB1O15117 783 aa16.46■□□□□ 0.23
ACTN1-214ENST00000555075 STRN4Q9NRL3 753 aa16.46■□□□□ 0.23
ACTN1-214ENST00000555075 ABCA3Q99758 1704 aa16.45■□□□□ 0.22
ACTN1-214ENST00000555075 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
ACTN1-214ENST00000555075 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
ACTN1-214ENST00000555075 AMPHP49418 695 aa16.44■□□□□ 0.22
ACTN1-214ENST00000555075 MORC1Q86VD1 984 aa16.44■□□□□ 0.22
ACTN1-214ENST00000555075 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.44■□□□□ 0.22
ACTN1-214ENST00000555075 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
ACTN1-214ENST00000555075 A0A0G2JS52 829 aa16.43■□□□□ 0.22
ACTN1-214ENST00000555075 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-214ENST00000555075 MYT1Q01538 1121 aa16.43■□□□□ 0.22
ACTN1-214ENST00000555075 SLIT2O94813 1529 aa16.43■□□□□ 0.22
ACTN1-214ENST00000555075 CPDO75976 1380 aa16.42■□□□□ 0.22
ACTN1-214ENST00000555075 SLIT3O75094 1523 aa16.42■□□□□ 0.22
ACTN1-214ENST00000555075 COL14A1Q05707 1796 aaKnown RBP16.41■□□□□ 0.22
ACTN1-214ENST00000555075 NSD2O96028 1365 aa16.41■□□□□ 0.22
ACTN1-214ENST00000555075 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
ACTN1-214ENST00000555075 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-214ENST00000555075 OVOS2A0A0J9YW53 1432 aa16.41■□□□□ 0.22
ACTN1-214ENST00000555075 OVOS2Q6IE36 1432 aa16.41■□□□□ 0.22
ACTN1-214ENST00000555075 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
ACTN1-214ENST00000555075 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms